Basic Information

Insect: Malthinus seriepunctatus
Gene Symbol: -
Assembly: GCA_963924605.1
Location: OZ004603.1:43283609-43300262[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00052 0.037 15.0 2.4 1 23 83 105 83 105 0.98

2 25 0.0047 0.33 12.0 1.3 1 23 111 133 111 133 0.97

3 25 0.0022 0.16 13.0 3.3 1 23 139 161 139 161 0.98

4 25 0.026 1.8 9.7 2.2 1 23 192 214 192 214 0.97

5 25 0.59 41 5.4 1.5 1 21 220 240 220 241 0.92

6 25 0.00081 0.057 14.4 5.7 1 23 248 270 248 270 0.97

7 25 0.00031 0.022 15.7 3.8 1 23 276 298 276 298 0.98

8 25 0.084 5.9 8.0 1.0 1 17 304 320 304 321 0.94

9 25 0.00058 0.041 14.8 4.7 2 23 348 369 347 369 0.97

10 25 0.0031 0.22 12.5 3.3 1 23 375 397 375 397 0.97

11 25 0.011 0.75 10.8 4.4 1 23 403 425 403 425 0.97

12 25 0.00036 0.025 15.5 2.2 1 23 431 453 431 453 0.98

13 25 0.12 8.3 7.6 3.5 1 23 459 481 459 481 0.96

14 25 0.082 5.7 8.1 2.0 1 20 487 506 487 508 0.93

15 25 0.00053 0.037 15.0 7.0 1 23 515 537 515 537 0.98

16 25 0.0015 0.1 13.6 4.2 1 23 543 565 543 565 0.97

17 25 5.1e-05 0.0036 18.2 4.4 1 23 571 593 571 593 0.98

18 25 0.01 0.71 10.9 1.3 1 23 599 621 599 621 0.97

19 25 8.7e-06 0.00061 20.6 0.6 1 23 627 649 627 649 0.98

20 25 0.12 8.7 7.5 1.6 1 23 655 677 655 677 0.94

21 25 0.35 24 6.1 5.5 3 23 685 705 683 705 0.96

22 25 0.073 5.1 8.2 5.1 1 23 711 733 711 733 0.97

23 25 5.2e-05 0.0036 18.1 2.0 1 23 739 761 739 761 0.98

24 25 0.0058 0.41 11.7 3.3 1 23 767 789 767 789 0.98

25 25 0.0005 0.035 15.0 6.1 1 23 795 817 795 817 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00052	0.037	15.0	2.4	1	23	83	105	83	105	0.98
2	25	0.0047	0.33	12.0	1.3	1	23	111	133	111	133	0.97
3	25	0.0022	0.16	13.0	3.3	1	23	139	161	139	161	0.98
4	25	0.026	1.8	9.7	2.2	1	23	192	214	192	214	0.97
5	25	0.59	41	5.4	1.5	1	21	220	240	220	241	0.92
6	25	0.00081	0.057	14.4	5.7	1	23	248	270	248	270	0.97
7	25	0.00031	0.022	15.7	3.8	1	23	276	298	276	298	0.98
8	25	0.084	5.9	8.0	1.0	1	17	304	320	304	321	0.94
9	25	0.00058	0.041	14.8	4.7	2	23	348	369	347	369	0.97
10	25	0.0031	0.22	12.5	3.3	1	23	375	397	375	397	0.97
11	25	0.011	0.75	10.8	4.4	1	23	403	425	403	425	0.97
12	25	0.00036	0.025	15.5	2.2	1	23	431	453	431	453	0.98
13	25	0.12	8.3	7.6	3.5	1	23	459	481	459	481	0.96
14	25	0.082	5.7	8.1	2.0	1	20	487	506	487	508	0.93
15	25	0.00053	0.037	15.0	7.0	1	23	515	537	515	537	0.98
16	25	0.0015	0.1	13.6	4.2	1	23	543	565	543	565	0.97
17	25	5.1e-05	0.0036	18.2	4.4	1	23	571	593	571	593	0.98
18	25	0.01	0.71	10.9	1.3	1	23	599	621	599	621	0.97
19	25	8.7e-06	0.00061	20.6	0.6	1	23	627	649	627	649	0.98
20	25	0.12	8.7	7.5	1.6	1	23	655	677	655	677	0.94
21	25	0.35	24	6.1	5.5	3	23	685	705	683	705	0.96
22	25	0.073	5.1	8.2	5.1	1	23	711	733	711	733	0.97
23	25	5.2e-05	0.0036	18.1	2.0	1	23	739	761	739	761	0.98
24	25	0.0058	0.41	11.7	3.3	1	23	767	789	767	789	0.98
25	25	0.0005	0.035	15.0	6.1	1	23	795	817	795	817	0.99

Sequence Information

Coding Sequence: ATGGAAGTAACAATCAAAGAAGAAATCCAAGATCATATTTTAGAGTATTCTGATAACAATTTCTCAGGTGCAGGTGTTAAAGAAGAACCTTATCATGACCACCTTTCGCATGTTGattcaaataaaatagaagaacactaTCTAAAAGAATCTATTCgagaaaatttcataatagaaaaagaagaaaatagtACAAGTACGACACAACCAAAAAATGAAAGCAATTCAAGTAAGagtgaaaaaccatttaaatgcTCCAAGTGCAAATACAGAACTGCATATAAATCAAATGTGAAAATACACATGGTGACTCATACTGGTAAAAAACGATTTAATTGTTGTGTGTGTGAAAAGGGATTTTCTGCTAAATCTGGTATAAAAACGCACATGTTGCTTCACACAGATGAAAAGCCATTTCAATGTAAATTTTGCGATTACAAGTCTTCGCACAAACCAGATTTAAAGGCGCACAATTTGACTCACACGCGTCACAAAACTTTTGAATGTACAATTTGTGATTACAAATCTGCAtttaaaaacaaACACATGTGCACTCATGGAGAAGAAAAACCCTTTCAATGTGCTTTATGCGATTATAAATGCACAGATAAGCGACGTTTAAGTATACATGTTCTAAACCACACTGGTCAAAAACCCCATTGTTGTCCTATGTGTCCCTTCAAAGGTCCAGATGAAGCAAGTTTAACTAAACACGCGTGTACCCAAATAGGTAATAAGCCACATAAATGTACCATGTGCGACTACAAATGTGCAGATAGACGTAATTTGAGTCGACACATGTTCATTCATACCGGGGAAAAGCCCTTTCAATGTGATCTATGCGACTATAAATGTACAGTTAAGTCAAGTTTAAAGACCCACTTACAAAACCACACTGGAGACAAACCACATCAGTGTACTATGTGTGATTACAAATCTTCGAGTAAATCATCTTTAAACTATAATAAAGAAATTGCAGATGCAGCTGTCAAAGAAGAACCTTTTTACGATGACctttcggatgttggtgaaaaaccaatTCAGTGTACTAAATGTGACTATAAATGTACAAATAGGGGAAGTTTGAATAGACATTTTCGAAACCACACTGGTGAAAAACCCCATCAATGTACTATATGTGAATTCAAAGCTGTGCAGAGATCAGCTTTAACTAGACACATGCACAACCACACAGGTTATTATCCGCACCGTTGTACTTTATGCGCCTTCAAAAGTCCTCATAAATCAAGTTTAACTCGACACATGTCCGTTCATACAGGTGAAAATCCCTTCCAATGTGCTCTATGCAGTTATAATAGTTTcgataaatcaaatttaacgaGGCATATGTTTACTCATGGAAATGAAAAACGTTTTGAATGTCGTCTATGTGCCTATAAATGTGCAGATAAGCGACaactaaataaacattttttaaatcacactggtgaaaaaccacatcattgtACTATGTGTCCTTTCAGAGGTTCAGATAAAGCAAGTTTAACTAGACACGTGTGTGCTCAAACAGGTAAAAAGCCATATCACTGTCATATGTGCGACTACAAATGTGCGGAGAAAAGTGGattaaagagacacatgttaacccatacaggtgaaaagccattTCAATGTTTTTTATGTGACTATAAATGTTCGGTGAAGTCAAGTTTAAAGAAACACGTACTAAACCATACTGGTGataaaccacatcaatgtacgaTATGTGACTACAAATGTTCAACTACATCAGCCTTAAGTAGACACATTATGACTCATGCAGCTGAAAATCCCTTTGAGTGTACTCTATGCGACTATAAATGTTCAGCTAAAGCGCTTTTAAATGAACATTTTATGATTcacactggtgaaaaaccatataAATGTACTATATGCGATTACGAAGGTTCGAGAAAATCATATTTAATGAGACATATGTTGGCCCATACAGGCCGTAAGCCACACCAATGTACCATATGTGATTTCAAAAGTTTGGATAAACCACGTTTAACTGAACACATGCTcacacacacaggtgaaaaaccacatctgTGTGATATATGTGGTTTCCAATGTTCGATAAGAAGACGTTTTACTCGCCATATGAGCACCCATACAGGTGATTACCTACATCAATGTACTATATGTGTCTTCAAAACTTCGAGCAAATCACACTTTGATCTGCATATGTTGAATCattcaggtgaaaaaccgtttgaATGTTCTCTATGCAACTATAAATTTTCTGCCAAGTCTAGTTTAAAGACCCACTTACTGAAGCACTCTGGTGAGAAACGATATGAATGTACTACGTGCGATTACAAATGTGCGATTATATCTAGTTTAAAAAAGCACATGTTTAAACATACGGGTGAAAAGCCTTTTCAATGTGATGTATGCTACTACAGATGTTCGTTTAAGAGCCTTTTAAAGAAACACCTACGAAAACACACACGTGAAAAGGAAGAcaactaa
Protein Sequence: MEVTIKEEIQDHILEYSDNNFSGAGVKEEPYHDHLSHVDSNKIEEHYLKESIRENFIIEKEENSTSTTQPKNESNSSKSEKPFKCSKCKYRTAYKSNVKIHMVTHTGKKRFNCCVCEKGFSAKSGIKTHMLLHTDEKPFQCKFCDYKSSHKPDLKAHNLTHTRHKTFECTICDYKSAFKNKHMCTHGEEKPFQCALCDYKCTDKRRLSIHVLNHTGQKPHCCPMCPFKGPDEASLTKHACTQIGNKPHKCTMCDYKCADRRNLSRHMFIHTGEKPFQCDLCDYKCTVKSSLKTHLQNHTGDKPHQCTMCDYKSSSKSSLNYNKEIADAAVKEEPFYDDLSDVGEKPIQCTKCDYKCTNRGSLNRHFRNHTGEKPHQCTICEFKAVQRSALTRHMHNHTGYYPHRCTLCAFKSPHKSSLTRHMSVHTGENPFQCALCSYNSFDKSNLTRHMFTHGNEKRFECRLCAYKCADKRQLNKHFLNHTGEKPHHCTMCPFRGSDKASLTRHVCAQTGKKPYHCHMCDYKCAEKSGLKRHMLTHTGEKPFQCFLCDYKCSVKSSLKKHVLNHTGDKPHQCTICDYKCSTTSALSRHIMTHAAENPFECTLCDYKCSAKALLNEHFMIHTGEKPYKCTICDYEGSRKSYLMRHMLAHTGRKPHQCTICDFKSLDKPRLTEHMLTHTGEKPHLCDICGFQCSIRRRFTRHMSTHTGDYLHQCTICVFKTSSKSHFDLHMLNHSGEKPFECSLCNYKFSAKSSLKTHLLKHSGEKRYECTTCDYKCAIISSLKKHMFKHTGEKPFQCDVCYYRCSFKSLLKKHLRKHTREKEDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -