Mser000782.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malthinus seriepunctatus
Gene Symbol
-
Assembly
GCA_963924605.1
Location
OZ004600.1:12076330-12097466[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 37 0.08 5.6 8.1 6.0 1 23 265 287 265 287 0.99
2 37 0.013 0.92 10.6 1.5 1 23 293 315 293 315 0.97
3 37 0.022 1.6 9.8 4.0 1 23 321 343 321 343 0.98
4 37 0.0016 0.11 13.4 3.3 3 23 351 371 350 371 0.98
5 37 0.37 26 6.0 5.9 1 23 377 399 377 399 0.96
6 37 0.00022 0.016 16.1 0.7 2 23 406 428 405 428 0.94
7 37 0.028 2 9.5 4.6 1 23 434 457 434 457 0.97
8 37 1.2 82 4.4 3.4 1 23 463 485 463 485 0.97
9 37 0.0015 0.1 13.5 3.2 1 23 491 513 491 513 0.99
10 37 0.014 0.97 10.5 0.7 1 23 519 542 519 542 0.95
11 37 0.00068 0.047 14.6 0.3 1 23 565 587 565 587 0.99
12 37 0.17 12 7.1 3.0 1 23 706 729 706 729 0.95
13 37 0.031 2.2 9.4 0.3 1 23 735 757 735 757 0.98
14 37 0.014 0.96 10.5 0.6 1 23 763 786 763 786 0.97
15 37 0.043 3 9.0 3.7 1 23 792 814 792 814 0.98
16 37 0.005 0.35 11.9 1.8 1 23 820 842 820 842 0.97
17 37 0.71 50 5.1 7.7 1 23 848 871 848 871 0.94
18 37 0.36 25 6.0 6.7 1 23 948 970 948 970 0.98
19 37 0.031 2.2 9.4 0.7 1 23 988 1011 988 1011 0.96
20 37 0.0088 0.62 11.1 0.8 1 23 1017 1039 1017 1039 0.98
21 37 0.067 4.7 8.3 1.5 1 23 1045 1068 1045 1068 0.97
22 37 0.26 18 6.5 1.1 1 21 1074 1094 1074 1095 0.93
23 37 0.79 56 5.0 2.5 1 23 1159 1181 1159 1181 0.97
24 37 0.033 2.3 9.3 0.6 1 23 1199 1222 1199 1222 0.95
25 37 0.0075 0.52 11.3 0.8 1 23 1228 1250 1228 1250 0.98
26 37 0.04 2.8 9.1 1.8 1 23 1256 1279 1256 1279 0.97
27 37 1.2 83 4.4 0.3 1 16 1285 1300 1285 1302 0.89
28 37 0.2 14 6.8 3.4 1 23 1427 1449 1427 1449 0.98
29 37 0.0037 0.26 12.3 5.8 1 23 1455 1477 1455 1477 0.98
30 37 0.00013 0.0088 16.9 1.1 2 23 1483 1504 1482 1504 0.97
31 37 0.025 1.7 9.7 3.3 1 23 1510 1533 1510 1533 0.95
32 37 0.00051 0.035 15.0 3.2 2 23 1540 1561 1539 1562 0.95
33 37 0.0086 0.6 11.1 0.4 1 23 1568 1591 1568 1591 0.97
34 37 0.0019 0.13 13.2 1.5 1 23 1597 1619 1597 1619 0.98
35 37 0.00018 0.012 16.5 0.9 1 23 1625 1647 1625 1647 0.99
36 37 0.08 5.6 8.1 0.2 1 23 1653 1676 1653 1676 0.97
37 37 0.0017 0.12 13.3 6.2 1 23 1682 1704 1682 1704 0.98

Sequence Information

Coding Sequence
ATGGAGTTTCGAATTGATCTTATCGAAAAAGagttattaaaacttaaaaaagtggAATTAGTACAGTTTATAATAAATAGAAGATTACCTGAAAAGGTGCAAAATGTGAAGATACTGATGAACTTTTTATTAACAATCGAATCTAGAACAGGTTGTCAGTGTTCAAGTCGTCAGATTATTCCTATAACATTTTATTCGTCTGCACAAGTTAACCAAAATGTAGTTGAACCTCAAAGACCACTAACTCACGTATGGATCAGTCCAGAATCTGCAATTCTCGAAACTAATTATACATCGACGGAACCAATAGTTCAGtcgactgtatctgaatttaaTTTCAACGCTGCCGAATCGCCAAGCAAAGCTGCACTGTATCAACCTCAATTCATACCGGCCGCACCAACAAACGAAACAACTGTACGAGATAACAAACCTGCAATAAACGTATCAACTACGTTAACAAATGCATCTGCAATATCCGAATTTGATTTAAATACAGCTGGACCATCACACAAATCTACTGACTATGAATCCGATTTGCTGCTGACTACACCCAAAATCGAATTTGAAGCAACCGAAACCAGTATTGAATCGCCTAGCGTAACTAATAAgGTGCAAGACACACATTTAACAAATCTATCTACAGAAGAAAATTCAAATCTACACACAAGCATTAAAATAGAATATGTTGAATTACAAGGGGAAAATGACAATTTTGACATTCCACTTGATGAATGTAATACTCCTATCGACCAAGAGTCGGAAAAAGCAACTAAAAAACATGAAGAAATATTTCAGTGTGAAATGTGTAATTATAACACACATTTTCAAAAGTACTTGACTAGACACAAGATGACTCATTCTGAAGTTGGAACATTCTCTTGCAATTCTTGTGATTATAAGACAGATACTAAAAGGTACTTGATTAAACACGGGATAACTCATTCTCAAGCAAGGCCTTTCTCTTGTAAATTTTGCAGTTACAAAGGTAAAACCAAGGATCAATTGAAGAGTCATAATCGAAGTCACAACGattctaaacaaattttgtGTGATTTGTGTGATTATAAGTGTTCTTCAAAGTCTACTTTAAAAGGTCACATGAAAAGTCACACTCGAGAAGTTGAATTTCATTGTTCTTTTTGtgattataaaacttttcaagaaacgtattttaaaagacatATGATAAACCATCAGGAACCTTCAGTAGTCCAATGTGAAATATGTGGAAATACATTCAAGAAGAAAGTATACTTACGAAAACATGTTCTACAATATCACAGCAGCGACAAACCGTTTAAATGTGATACTTGTGATTATACTTGCGTccataaaagtattttaaaaactcatatTAGTAGAGTTCATTTACACGAGACCAACTTCAGTTGCGAattttgtgattataaatgtttcGGAAAAAGTTCAATTGATAAGCATCGTATGATTCATACTGGAGAGAAACCGTTTAAATGTAAAGTGTGCGATCACAAATCAGCATCGAAACCGAGACTTAAACTTCATATGCGAACTCATACCggtgaaaaaccacatttttGTGATATTTGTGGGTATAGATCGACTGTGAAAGCAAATATAAGACTTCATATACAACGCGTTCACACCAACGAAAAGCCTTATAGTTctacaTTAACTCAACATCGTATGAGTCATACCGGAGAGAAACCGTTTAAATGTAACTTGTGCGATTACAAAGCAGCACTAAAAGGTGGGCTTAGAATTCATATGCGAactcatactggtgaaaaaccattttcTTGTGAATTTTGCGAATATAGAGCGGCTTTTAAACCAAATGTGGATGGCataaatttgagaaatttatcTACTGAAGAAAGTGCAGATCTACACACAACTATAAAAATAGAAGATCCCGAAGTAAGTGATGAAAATGAAGAGAATTTTGAAACAACGCTTGATCTTTCTGTTACTGACAAAAGACCGTTAGGAAATGccgatgtaaaaaaattattccagtGCACAATGTGCGAATATAATACACGTTGTAAACGCTACTTCCCTATACACATGAAGATTCATTCTGAAGCATACATTTTGCAAACTCATCGTCGAAGACGTAGTATTCAAACGTTCTCATGTGATTTGTGCCATTATAAAACACGTCTTAATGCCTACttaattaaacacaaaaaattgCTTCATTCTGAAGTAAAACCTTTCTCGTGTGATTCTTGTGATTACAAAGCTGAAAGCAAGGAGCAATGGAAAGCTCATGTTCAAACTCATAATTCTTCTAAAAACTTTTCCTGTGATTTGTGCGATTTTAAAACGCGTCTTAATGAATACTTAATTAATCACATAAAGGTAACTCATTCTAAAGAAAGGCCTTTCTCTTGTAATGATTGTGATTACAAAGCTAAAAGCAAAAAAGCATTGAAATGCCATGTTCGAACTCATActggtattaaaaatttttcgtgTCATTTGTGCGATTATAAAAGTGTATCAAATTTCTTGTTACAAAATCACATTCAAGGCCATACCCGAGAAGTTGAATTTCGTTGTTCTCATTGtgattataaaacttttcaagaGCTGCATTTAAAACACCATATTACGAATATGCATGATGAAACTTTGGTAGTTCAGTGTGAAGTGGATGACataaatttgagaaatttatcTACTGAAGAAAGTTCGGATTTACACACGAGTATTAAAATTGAAGATCATGAAATAAGTAATGAAAACGACAAGAAATATGAAACATCGCTAAATCTTTCTCTTTCTGAGAAAGGACTGTTAGAAAATACAGATAATAAGAAACTGACAACCGATCGAAAAGTTAAAGAATTATTCCAGTGCAAAAAGTGCGATTTTAATACACATCATAAACGCAACCTCCCTCAACACATGAAAATTCATTCTGAAGCGTACAAGTTGAAACCTCATCGTCGACGTCGAAGTATACAAACGTTTTCCTGTGATTTGTGCGATTATAAAACACGTCTGAATGCCTACTTGCTTAAACACAAACAGGTAGTTCATTCTGTAGAAAGACCTTACTCGTGTAATTCTTGTGATTACAAAGCAAAAAGCAAGGAGCAATGGAAAGTTCATGTTCAAACTCATAATGATTCTAAAAGTTTTTCCTGTGATTTGTGCGATTATAGAACGCATCTTAATGTCTACTTAATTAAACACATAAAAATAACTCATGCTAAAGAAAAACCATTCTCTTGTAATGATTGTGATTACAGAGCCAAAACCAAGGATGTATTGAAATGTCATATTCGAGTGGATGACataaatttgagaaatttatcTACTGAAGAAAGTTCGGATCTACACACAAGTATTAAAATTGAAGATCATGAGGAAAACGACAAGAAATTTGAAACATCGCTACGTCTTTCTCTTACTGAGAAAGGACTGCTAGAAAATACAGATAATAAGAAACTAACAACCGATCGAAAAGTTAAAGAATTATTCCAGTGccaaatttgcaattataataCACATAATAAACGCTACTTCCCTATACACATGGAAATTCATTCTGAAGCATACAAGTTGCAACCTCATCGTCGACGCCGAAGTATTCAAACGTTCTCCTGTGATTTGTGCGATTATAAAACACGTCTGAATGCCTACTTGATTAAACACAAAAAGGCAGTTCATTATGAAGAAACATCTTTCTCGTGTAATTCTTGTGATTACAAAGCAAAAAGCAAGGAGCAATGGAAAGCTCATGTTCAAACTCATAATGATTCTAAAAGTTTTTCCTGTGATTTGTGCGATTTTAAAACGCGTCTTAATAAATACTTACTTAAACACTTAAAAGTAACTCATGCTAAAGAAAAGCCTTTCTCTTGTAATGATTGTGATTACAAAGCTAAAAGCAAGGAATTATTGGTGCAAGACATAAATATAAGATCTGCAGAAGAAAATTCAGTTCTAGACACAACTATTAAAATAGAATATCCTGaattaaatgaagaaaatatacaaaaatttgaatcaTCGGTAGATGAATGTAAACCTCTTATGGACCAAGAATTGTTAGAAAATGAACATGATAACGAAGTGCAAGACATAGATTTAAGATCTACAGAGGAGAATTCGCATCTAGACACAAGTATTAAAATAGAATATCctgaattaaataaagaaaatatacaaaaattagaaaaatcggTTGATGAATGTAAACCTCGTATGAACCATGGCGAAGAACTTTTAGAAAATGAACATGATAAAGAAGTAACATCCGATCCAAAAGTAGAAGAAATATTTCAGTGTCAATTGTGTGATTATAAGACACGTTTTAAACATTATATAATTAGGCACGGGATAACGCATTCTGAAGCAAGGCCGTTCTCGTGTTACACTTGTGGGCACACAGCTAAAACTAAGTGTCAATTGAAAGTTCATATTAGAACTCATAGGGGTCCCTATATTTCGTGTGATTTGTGCGATTATAAAACTTCTACAAAAtaccttttaaaaaatcacatgcAAAGTCATACTCGAGAAGTTGAATATCGTTGTTCTCTTTGtgattataaaacttttcaagagctgcatttaaaaaaacacattatgAATATGCACGGTGAAAATTTAGTAGTTCAGTGTGAAGTATGTGGAACTACATGTAAAaacaaaatatctttaaaaaatcatattcTACAACATCATACAACTGAGAAACCATTTAAATGTGATATTTGCGACTTTTCTTCTGCTATTAAAGGTGCATTTAATCATCATATTCGTGCTGTTCATTTGCGTGAGAAAAAGTTCAGCTGTGAATTTTGTGATCTTAAATTTTATAGGAACAATGCAGTTACTCAACATCGTCGGATTCATACcggagaaaaaccgtttaaatgtAACGTGTGCGATTACAAGACAGCATTGAAACAAGGGCTTAGGATTCATATGCGAactcatactggtgaaaaaccattttcTTGTGAATTTTGTGGATATAGGGCTGCTTTTAAACCAAATGTAAAGCTTCATATACAGCGAGTTCATTCCAATGAAATGCCATTCAGTTGTAAAATGTgcgattttaaaagtaaatatcaAAGACATCTAAAGAAGCATATGGAAACTCacgataaaaatatttaa
Protein Sequence
MEFRIDLIEKELLKLKKVELVQFIINRRLPEKVQNVKILMNFLLTIESRTGCQCSSRQIIPITFYSSAQVNQNVVEPQRPLTHVWISPESAILETNYTSTEPIVQSTVSEFNFNAAESPSKAALYQPQFIPAAPTNETTVRDNKPAINVSTTLTNASAISEFDLNTAGPSHKSTDYESDLLLTTPKIEFEATETSIESPSVTNKVQDTHLTNLSTEENSNLHTSIKIEYVELQGENDNFDIPLDECNTPIDQESEKATKKHEEIFQCEMCNYNTHFQKYLTRHKMTHSEVGTFSCNSCDYKTDTKRYLIKHGITHSQARPFSCKFCSYKGKTKDQLKSHNRSHNDSKQILCDLCDYKCSSKSTLKGHMKSHTREVEFHCSFCDYKTFQETYFKRHMINHQEPSVVQCEICGNTFKKKVYLRKHVLQYHSSDKPFKCDTCDYTCVHKSILKTHISRVHLHETNFSCEFCDYKCFGKSSIDKHRMIHTGEKPFKCKVCDHKSASKPRLKLHMRTHTGEKPHFCDICGYRSTVKANIRLHIQRVHTNEKPYSSTLTQHRMSHTGEKPFKCNLCDYKAALKGGLRIHMRTHTGEKPFSCEFCEYRAAFKPNVDGINLRNLSTEESADLHTTIKIEDPEVSDENEENFETTLDLSVTDKRPLGNADVKKLFQCTMCEYNTRCKRYFPIHMKIHSEAYILQTHRRRRSIQTFSCDLCHYKTRLNAYLIKHKKLLHSEVKPFSCDSCDYKAESKEQWKAHVQTHNSSKNFSCDLCDFKTRLNEYLINHIKVTHSKERPFSCNDCDYKAKSKKALKCHVRTHTGIKNFSCHLCDYKSVSNFLLQNHIQGHTREVEFRCSHCDYKTFQELHLKHHITNMHDETLVVQCEVDDINLRNLSTEESSDLHTSIKIEDHEISNENDKKYETSLNLSLSEKGLLENTDNKKLTTDRKVKELFQCKKCDFNTHHKRNLPQHMKIHSEAYKLKPHRRRRSIQTFSCDLCDYKTRLNAYLLKHKQVVHSVERPYSCNSCDYKAKSKEQWKVHVQTHNDSKSFSCDLCDYRTHLNVYLIKHIKITHAKEKPFSCNDCDYRAKTKDVLKCHIRVDDINLRNLSTEESSDLHTSIKIEDHEENDKKFETSLRLSLTEKGLLENTDNKKLTTDRKVKELFQCQICNYNTHNKRYFPIHMEIHSEAYKLQPHRRRRSIQTFSCDLCDYKTRLNAYLIKHKKAVHYEETSFSCNSCDYKAKSKEQWKAHVQTHNDSKSFSCDLCDFKTRLNKYLLKHLKVTHAKEKPFSCNDCDYKAKSKELLVQDINIRSAEENSVLDTTIKIEYPELNEENIQKFESSVDECKPLMDQELLENEHDNEVQDIDLRSTEENSHLDTSIKIEYPELNKENIQKLEKSVDECKPRMNHGEELLENEHDKEVTSDPKVEEIFQCQLCDYKTRFKHYIIRHGITHSEARPFSCYTCGHTAKTKCQLKVHIRTHRGPYISCDLCDYKTSTKYLLKNHMQSHTREVEYRCSLCDYKTFQELHLKKHIMNMHGENLVVQCEVCGTTCKNKISLKNHILQHHTTEKPFKCDICDFSSAIKGAFNHHIRAVHLREKKFSCEFCDLKFYRNNAVTQHRRIHTGEKPFKCNVCDYKTALKQGLRIHMRTHTGEKPFSCEFCGYRAAFKPNVKLHIQRVHSNEMPFSCKMCDFKSKYQRHLKKHMETHDKNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-