Basic Information

Insect: Malthinus seriepunctatus
Gene Symbol: -
Assembly: GCA_963924605.1
Location: OZ004600.1:32275714-32277958[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00012 0.0081 17.0 0.2 1 23 156 178 156 178 0.97

2 16 0.0036 0.25 12.3 3.1 1 23 184 206 184 206 0.97

3 16 0.5 35 5.6 1.6 8 23 219 234 212 234 0.87

4 16 6.4e-05 0.0045 17.8 3.9 1 23 246 268 246 268 0.98

5 16 2.6e-07 1.8e-05 25.4 0.4 1 23 274 296 274 296 0.98

6 16 4.8e-07 3.4e-05 24.5 3.4 1 23 302 324 302 324 0.96

7 16 0.035 2.5 9.2 2.9 3 23 345 365 343 365 0.96

8 16 0.012 0.85 10.7 0.1 3 23 385 406 383 406 0.92

9 16 0.0096 0.67 11.0 0.1 3 23 414 434 412 434 0.95

10 16 0.019 1.4 10.0 0.1 1 23 446 468 446 468 0.95

11 16 1.8e-05 0.0013 19.6 0.1 1 23 500 523 500 523 0.97

12 16 0.00015 0.01 16.7 2.9 1 23 529 551 529 551 0.97

13 16 0.00072 0.05 14.5 4.4 1 23 557 579 557 579 0.98

14 16 0.016 1.1 10.3 8.1 1 23 585 609 585 609 0.98

15 16 3e-05 0.0021 18.9 0.9 1 23 615 637 615 637 0.97

16 16 8.9e-05 0.0063 17.4 9.1 1 23 643 665 643 665 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00012	0.0081	17.0	0.2	1	23	156	178	156	178	0.97
2	16	0.0036	0.25	12.3	3.1	1	23	184	206	184	206	0.97
3	16	0.5	35	5.6	1.6	8	23	219	234	212	234	0.87
4	16	6.4e-05	0.0045	17.8	3.9	1	23	246	268	246	268	0.98
5	16	2.6e-07	1.8e-05	25.4	0.4	1	23	274	296	274	296	0.98
6	16	4.8e-07	3.4e-05	24.5	3.4	1	23	302	324	302	324	0.96
7	16	0.035	2.5	9.2	2.9	3	23	345	365	343	365	0.96
8	16	0.012	0.85	10.7	0.1	3	23	385	406	383	406	0.92
9	16	0.0096	0.67	11.0	0.1	3	23	414	434	412	434	0.95
10	16	0.019	1.4	10.0	0.1	1	23	446	468	446	468	0.95
11	16	1.8e-05	0.0013	19.6	0.1	1	23	500	523	500	523	0.97
12	16	0.00015	0.01	16.7	2.9	1	23	529	551	529	551	0.97
13	16	0.00072	0.05	14.5	4.4	1	23	557	579	557	579	0.98
14	16	0.016	1.1	10.3	8.1	1	23	585	609	585	609	0.98
15	16	3e-05	0.0021	18.9	0.9	1	23	615	637	615	637	0.97
16	16	8.9e-05	0.0063	17.4	9.1	1	23	643	665	643	665	0.97

Sequence Information

Coding Sequence: atggatATGTCCGCACTAACAGCACCTTTGCAActtgataaaatttgtagagCATGTTTAACTGAGAAAGGCGAAATGCACCCTCTTTTTGGAGCTTCTCTTGATGAAATGTTGGTTTCATTTGCTGGAATTGAGGTGAGTGAAGATGATGGCTTTCCAAATCTTATGTGTGGTCAATGTGTATTACTGTGCAATAAAGCATACACATTTAAACAACAATGTGAAAAATCCGATAATATTTTAAGGCAGTATTTAAACAGCGAGTTTCAGGAGCAATTACAAAATCCAACAGAGGATATAACCAAAGATGAATTACATGAGGTATTACAACTCCCCGATCTTATCATATCTGTAATAGAAGAAGATATAATACCAGCTGAACCTGTAAATATTAGTTACGCAGATGATAGTGCACATTCACAAGCAGATCTAAAGGTTAAAGACGAATTAATAGACCAAACCAAGTTTACATGTTTGAAATGTAATGAATCTTTCCCATTAAAAGTAGATCTTAAGGTTCATATGCTGGGTCATCTTAAAGAGTTAGAACACGTTTGTCATGTATGTAACAAAGGTTTTCCAGAAGCCTTGAGATTTAAGCGTCATTTAAAGATGCATCTCAATGAGAAACCACATCACTGTAAACCAAATGACATGTCCTTTGCAAAAAGCTCTAATTTAAGCAAACATGAAAAGGAACATTCTGGCGAGTTAGATAATATTAAGAGAAAACCGCATACATGTTCAGTatgtaaaaaagaatttaaatgggctaaaaatttaaaaagacatttaagaacacacacaggtgaaaaaccatacgTTTGTAATATATGTCAGAAAAGTTTCACTCAAGCTTCTAGTCTTGGAAAGCATTTGAGAGCGCATGCAGGAATAAATCTATTCTTGTGCTCAACATGTGGCAAACGGTTTAAATCATCACATTCTTTAGAAGTTCATATGCGAACTCATATAGAAGAAGAGCTTAAGATTGAAAATACAAATGTAGAACATCGAAAAGTGTTATCTAACTGCACAGTTTGTGATAAAGTATGTGCAGATGCTTGTTCGTTAtcgttacattttttaaaacacacATTCAAGTTACAAAGTGTCATAGATGTGCTTAACATAGATgaagaatttatattttgtgaAATTTGCGGTCAATTAtttgaatcaaatttaaatttagaagaaCATTATGAAGAAGAGCATAATGGCAAATTAACTTGGGCGTGCACGTTATGCAGTAAGGTATTTGAAAAGGAAGCAGCTCTACTAAATCACAACGATACACATTCAGAGCTCGATTCCAACATTCtagataaaaaatttcaatgtgTTATATGCTTTAGTGAGTTTGAAACGAAAGAAGCTTTAGTGAAACATGCAGTTgtacatttaaagaaaaaatatacctGTAAGAAATGCTCGTTACCATTTTGCACTCAATTTTCTCATGAAGAccatttaaaatgtcattttaaaagGAGATTTGTGTGTCCAACTTGTGATAAAACTTTACCCTCAAAACAAGCCCTTAATGCTCATATAAATAGTGTGCATTTAGGACAGTTACTTCACATATGTCATATTTGCAGTAAACAATTTGCTACATTAAGTCGTCTCACTGTTCATTTAAAGATACACACAACTACTAAAAAACATGTTTGTTCTTATTGTGAATACAGTTCACATAGATCTGATgatttaaaaatgcatttaagaACCCATACACATGAAAGACCTTAtaaatgtacatttttaaattgtgcaaTGAGTTTTAAAACTTCCAGTCACTTATGTAATCACGTGCATAGACATCTTAATGTTCGTAATTTTAAATGTACGATTTGTACACTTGCGTTTACTACTAATACAGAATTAAAAGAACATCGTTTGCTGCATACAGGAGAAAGGCCACACACTTGTGATGTATGTCAACACACATTTAAAAGAAAGTATCATTTGAAAGTTCATATGAAACAACACAGAAAATAG
Protein Sequence: MDMSALTAPLQLDKICRACLTEKGEMHPLFGASLDEMLVSFAGIEVSEDDGFPNLMCGQCVLLCNKAYTFKQQCEKSDNILRQYLNSEFQEQLQNPTEDITKDELHEVLQLPDLIISVIEEDIIPAEPVNISYADDSAHSQADLKVKDELIDQTKFTCLKCNESFPLKVDLKVHMLGHLKELEHVCHVCNKGFPEALRFKRHLKMHLNEKPHHCKPNDMSFAKSSNLSKHEKEHSGELDNIKRKPHTCSVCKKEFKWAKNLKRHLRTHTGEKPYVCNICQKSFTQASSLGKHLRAHAGINLFLCSTCGKRFKSSHSLEVHMRTHIEEELKIENTNVEHRKVLSNCTVCDKVCADACSLSLHFLKHTFKLQSVIDVLNIDEEFIFCEICGQLFESNLNLEEHYEEEHNGKLTWACTLCSKVFEKEAALLNHNDTHSELDSNILDKKFQCVICFSEFETKEALVKHAVVHLKKKYTCKKCSLPFCTQFSHEDHLKCHFKRRFVCPTCDKTLPSKQALNAHINSVHLGQLLHICHICSKQFATLSRLTVHLKIHTTTKKHVCSYCEYSSHRSDDLKMHLRTHTHERPYKCTFLNCAMSFKTSSHLCNHVHRHLNVRNFKCTICTLAFTTNTELKEHRLLHTGERPHTCDVCQHTFKRKYHLKVHMKQHRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00951147;
90% Identity: -
80% Identity: -