Mser000781.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malthinus seriepunctatus
Gene Symbol
-
Assembly
GCA_963924605.1
Location
OZ004600.1:12066046-12074643[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 42 0.007 0.49 11.4 3.1 1 23 82 104 82 104 0.98
2 42 1.4 1e+02 4.2 0.4 1 23 110 132 110 132 0.92
3 42 0.007 0.49 11.4 3.1 1 23 232 254 232 254 0.98
4 42 4.2 2.9e+02 2.7 0.2 3 23 262 282 261 282 0.96
5 42 0.24 17 6.6 6.1 1 23 288 310 288 310 0.97
6 42 0.094 6.6 7.9 1.8 2 23 318 339 317 339 0.96
7 42 0.65 45 5.2 4.1 1 23 409 431 409 431 0.98
8 42 0.37 26 6.0 1.9 1 23 448 471 448 471 0.93
9 42 0.0048 0.34 11.9 0.5 2 23 478 499 477 499 0.97
10 42 1.5 1.1e+02 4.1 2.5 1 23 506 529 506 529 0.90
11 42 0.21 15 6.8 0.1 2 23 536 557 535 557 0.96
12 42 0.13 9.2 7.4 2.4 1 23 562 585 562 585 0.90
13 42 0.58 40 5.4 0.1 2 23 592 613 591 613 0.95
14 42 0.003 0.21 12.6 4.1 2 23 621 642 620 642 0.97
15 42 0.00049 0.034 15.1 1.1 1 23 648 670 648 670 0.98
16 42 0.0049 0.34 11.9 1.2 1 23 686 708 686 708 0.98
17 42 0.0027 0.19 12.7 0.7 1 23 714 736 714 736 0.98
18 42 0.001 0.072 14.0 3.2 2 23 742 763 741 763 0.96
19 42 0.081 5.7 8.1 7.6 1 23 769 791 769 791 0.96
20 42 2.7e-05 0.0019 19.0 4.0 1 23 797 819 797 820 0.96
21 42 0.0029 0.2 12.6 0.7 1 23 826 849 826 849 0.97
22 42 0.82 58 4.9 7.1 1 23 855 877 855 877 0.97
23 42 0.00035 0.025 15.5 2.4 1 23 883 905 883 905 0.99
24 42 0.16 11 7.2 4.5 1 23 991 1013 991 1013 0.98
25 42 0.55 38 5.5 1.6 1 23 1030 1053 1030 1053 0.93
26 42 0.016 1.1 10.3 0.5 2 23 1060 1081 1059 1081 0.96
27 42 1.5 1.1e+02 4.1 2.5 1 23 1088 1111 1088 1111 0.90
28 42 0.11 7.9 7.6 0.1 2 23 1118 1139 1117 1139 0.96
29 42 0.13 9.2 7.4 2.4 1 23 1144 1167 1144 1167 0.90
30 42 0.58 40 5.4 0.1 2 23 1174 1195 1173 1195 0.95
31 42 0.0011 0.079 13.9 5.6 2 23 1203 1224 1202 1224 0.97
32 42 0.00049 0.034 15.1 1.1 1 23 1230 1252 1230 1252 0.98
33 42 0.0092 0.64 11.1 0.8 1 23 1268 1290 1268 1290 0.98
34 42 0.015 1.1 10.4 1.1 1 23 1296 1318 1296 1318 0.98
35 42 0.00088 0.062 14.3 2.7 2 23 1324 1345 1323 1345 0.96
36 42 0.064 4.5 8.4 5.2 1 23 1351 1373 1351 1373 0.97
37 42 0.00033 0.023 15.6 3.8 1 23 1379 1401 1379 1402 0.96
38 42 0.0031 0.22 12.6 0.4 1 23 1408 1431 1408 1431 0.97
39 42 0.16 11 7.2 4.2 1 23 1437 1459 1437 1459 0.97
40 42 0.079 5.5 8.1 3.2 1 23 1465 1487 1465 1487 0.99
41 42 0.072 5 8.3 0.2 1 23 1493 1516 1493 1516 0.97
42 42 0.0021 0.15 13.1 6.0 1 23 1522 1544 1522 1544 0.98

Sequence Information

Coding Sequence
ATGCAAGACATGCGTTTAAGAAAATTAACTAcagaagaaaattcaaattcatcAGACGCGAGTATTAAAATAGAGTATCCTgaattaaaaaaggaaaatacaTCGCTCGATGAATGTAAACTTCTTCATGACAAAGAACAAAATGTAGAAAAAGCAACATCCGAGCCAAAAGTTGATGAATTATTTCAGACTGAAATACGTAATTATCAGACAAATAGTAAAAATTGCTTGTCTGAAGAAAGTTACTCTTGTAATTCTTGTGGTCACAAAAGCAAAACCAAGGATCAATGGAAAACCCATGTTCTAACTCATAATGCTGCCAAAACTTTTTTGTGTGATTTCTGCGATTATAAAACACTTAATAGGGGACATTTAGCTGTACATGTAGCAATTCATTCTAGTGCAAGGCCTTTCGCTTGTGATTCTTGTGATTATACATCTAAGACCAAGGTGCAAGACATGCGTTTAAGAAAATTAACTACAGAAGAAAATTCAGATTCATCAGACACGAGTATTAAAATAGAGTATCCTgaattaaaaaaggaaaatacaTCGCTCGATGAATGTAAACTTCTTCAGGACAAAGAACAAAATGTAGAAAAAGCAACATCCGAGCCAAAAGTTGATGAATTATTTCAGAGTGAAATACGTAATGATcagacaaataataaaaattgcttaTCTGAAGAAACTTACTCTTGTAATTCTTGTGGTCACAAAAGCAAAACCAAGGATCAATGGAAAACTCATGTTTTAACTCATAATGCTTCTAAACTTTTATTGTGTGATTTGTGCGATTATAAAACACTTAATAGGAGTCGTTTAGCTGTACATGTAGCAACTCATTCTATTGCAAGGCCTTTCGCTTGTCATTCGTGTGATTATAAATCTAAGACCAAGTACGGATTGACATGCCACATTCGAACTCATACTGGTGCTCATAAAAAATTATCGTGTGATTTGTGCGAATACACATGCGCTACAAATctccttttaaaaattcacaagcAAAAGCATACTCGAGAAGTGCAAGACATAAATTTAACTACAGAAGAAAATTTAGATTCAGACACTAGTATTAAAATCGAATACCATGATATAACTGAAGACAATTCCAAGAAACTGGACACATCGATAGATCAATGTAAATCTCTTAGTGACAAAGGACCGTTAGAAAATGCCgatgataaaaaattaacaacagatcgaaaagttgaaaaatttttccaGTGCAAAATGTGCGATTTTAATACACATAATAAATACTACTTCCCTATACACatgaaaattcattttgaaGCAAATTTGAAAACTCGTCGCCGACGTCGAAGTATTCAAACATTCTCCTGTGATTTGTGCGATTTTACAACACGTCTTAATGCTTGCttaattaaacacaaaattCTCACTCATTCCGAAGGAAGACTTTTGTCGTGTAATTCTTGTGATTACAAAACTGAAAGCAAGGAGCAATGGAAAGCTCATATTCAAACTCATTCTTCTGTTCCTAGAAAATTTACCTGTGATTTGTGCGATTATAGAACGCATCTTAATGCCTACTTAATTAAACACAAATTTCTCACTCATTCTGAAGGAAAATCTTTGTCGTGTAATTCTTGTGATTACATAGCTGAAAGCAAGGAGCAATGGGAAGCTCATGTTCAAACACATCCTTCTAGAAGATTTACCTGCGATTTGTGCGATTATAAAACGAATCTTAATGCCCACTTAATTAAACACAAATTTCTCACTCATTCTGAAGGAAAATCTTTGTCGTGTAATTCTTGTGATTACAAAGCTGAAAGCAAGGAGCAATGGGAAGCTCATGTTGAAAGTCATAATGCTTCTCAAATATTATTACAGTGCAAATTGTGCAATTATAATACACATAATAAATACTACTTAACTATACACATGAAAACTCATTCTGAAGCAAGGCCTTTCTCTTGCAATTTGTGTGATTACAAAGCTAAACGAAAGGTGCTATTGAAAACTCATATCCTAACTCATACtgcttcaaaaaatttaaaggtaacTCATTCTGAAGCAAGACCTTTCTCTTGTGATTTGTGCGATTATAAATCCATAAACATTAACAACTTACGTAAACACAAAAAGGTTCATTCTGCAGCGAGACCTTTCTCTTGTTATTCTTGTGATTATAAAGCTAAGACCAAAGATATGTTGATAAGTCATATTCGAATTCATAGTGCTCGAAATATTTCGTGTGCTTTGTGCAATTATAAATGTTCTAATAAAtacagtttaaaaaatcacatggAAAAGCATACTCGAGAGATTGAATATAGTTGTTCTGTTTGtgattataaaacttttcaaaaatatcattttagaaAACATACAAAATTCCACGACGACACCTCATTATTTCAATGCGACAAATGTGGAAATACATTTAAGAACAAAACATACTTAATAAACCATATTAAACAACATCACATTAGTGACAAACCATTTAAGTGTACTGTTTGCGATTATGCTTGTATCAGTAAAGGTATTTTAAAGAAGCATATCAATGTCATTCACGATCGTGTGAAAAGATTCAGCTGTGAattttgtgattataaatgttttgGAAAAAGTTCGATAACTCATCATCGTAGGAGTCACACCGGAGAGAAGCCGTTTAAATGTAACGTGTGCGATTACAAGGCATCAATTAAAACCCATCTTGTAAATCATATGAGAactcatactggtgaaaaaccattttcTTGTGAATTTTGCGGATATAGGGCTTCTTTTAAACCAAATGTGCAAGACATAAATTTAACAACGGAAGAAAATTTAGATTCAGACACAAGTATTAAAATTGAATATCATGAAATACCTGAAGACAATTCCAAAAAACTAGACACATCGATTAATCAATGGAAATCTCTTAGTGACAAAGGACCGTTAGAAAATGCTGATGATAAAAAATTACCCCATCGAAAAGTTAAAACATTATTCCAGTGCAAAATGTGCGATTTTAATACACATAATAAACGCTACCTCCCTAAACACatgaaaattcattttgaaGCAAAGTTGAAAGCTCGTCGCCGACGTCGAAGTATTCAAACATTCTCCTGTGATTTGTGTGATTTTACAACACGTATTAATGCCTGCttaattaaacacaaaattCTCACTCATTCCGAAGGAAGACCTTTGTCGTGTAATTCTTGCGATTACAAAACTGAAAGCAAGGAGCAATGGAAAGCGCATGTTCAAACCCATTCTTCTGTTCCTAGAAAATTTACCTGTGATTTGTGCGATTATAGAACGCATCTTAATGCCTACTTAATTAAACACAAATTTCTCACTCATTCTGAAGGAAAATCTTTATCGTGTAATTCTTGTGATTACAAAGCTGAAAGCAAGGAGCAATGGGAAGCTCATGTTCAAACACATCCTTCTAGAAGATTTACCTGCGATTTGTGCGATTATAAAACGAATCTTAATGCCCACTTAATTAAACACAAATTTCTCACTCATTCTGAAGGAAAATCTTTGTCGTGTAATTCTTGTGATTACAAAGCTGAAAGCAAGGAGCAATGGGAAGCTCATGTTGAAAGTCATAATGCTTCTCAAATATTATTACAGTGTAAAATGTGCAATTATAATACACATAATAAATCCTACTTGTTTAGACACATGAAAACTCATTCTGAAGCAAGGCCTTTCTCTTGCAATTTGTGTGATTACAAAGCTAAACGAAAGGTGCTATTGAAAACTCATATCCTAACTCATACtgcttcaaaaaatttaaaagtaactcATTCTGAAGCAAGACCTTTCTCTTGTGATTTGTGCGATTATAAATCCATAAACATTATCAACTTACGTAAACACAAAAAGATTCATTCTGCAGCGAGACCTTTCTCTTGCTATTCTTGTGATTATAAAGCTAAGAGCAAATTTATGTTGATAAGTCATATTCGAATTCATAGTGCTCCAAATATTTCTTGTGCCttgtgcgattataaatgttctaCTAAATACATGTTAAAAAATCACATGCAAAATCATACTCGAGAGATTGAATATCGTTGTTCTCTTTGcgattataaaacttttcaaaaaaattattttcgaatgCATATGAAATTTCACGAAGAAACCACATTATTTCAATGTGACAAATGTGGAAATACATATAAAACCAAAACATCCTTAGATAACCATATTAAACAACATCACACTAGTGACAAACCATTTAAGTGTGGTATTTGCGATTATGCTTGTATCAGTAAAGGTATTTTAAAGAAGCATATCAATGTCATTCACGATCGTGAGAAAAGATTCAGCTGTGAattttgtgattataaatgttttgGAAAAAGTTCGATAACTCAGCATCGTAGGATTCATACCGGAGAGAAACCGTTTAAATGTAACGTGTGCGATTACAAATCAGCATTGAAACAAGGGCTTAGATGCCATATGCGAactcatactggtgaaaaaccattttcTTGTGAATTTTGTGGGTATAGGGCAGCTTTTAAACCAAATGTAAAGCTTCATATACAGCGCGTTCATTCCAATGAAATGCCATTTAGTTGTAAACTGTgcgattttaaaagtaaatatcaGAGACATCTAAAGAAGCACATGGAAACTCACGATAAAAATGGCGAAGGAAATTCAAGTTAA
Protein Sequence
MQDMRLRKLTTEENSNSSDASIKIEYPELKKENTSLDECKLLHDKEQNVEKATSEPKVDELFQTEIRNYQTNSKNCLSEESYSCNSCGHKSKTKDQWKTHVLTHNAAKTFLCDFCDYKTLNRGHLAVHVAIHSSARPFACDSCDYTSKTKVQDMRLRKLTTEENSDSSDTSIKIEYPELKKENTSLDECKLLQDKEQNVEKATSEPKVDELFQSEIRNDQTNNKNCLSEETYSCNSCGHKSKTKDQWKTHVLTHNASKLLLCDLCDYKTLNRSRLAVHVATHSIARPFACHSCDYKSKTKYGLTCHIRTHTGAHKKLSCDLCEYTCATNLLLKIHKQKHTREVQDINLTTEENLDSDTSIKIEYHDITEDNSKKLDTSIDQCKSLSDKGPLENADDKKLTTDRKVEKFFQCKMCDFNTHNKYYFPIHMKIHFEANLKTRRRRRSIQTFSCDLCDFTTRLNACLIKHKILTHSEGRLLSCNSCDYKTESKEQWKAHIQTHSSVPRKFTCDLCDYRTHLNAYLIKHKFLTHSEGKSLSCNSCDYIAESKEQWEAHVQTHPSRRFTCDLCDYKTNLNAHLIKHKFLTHSEGKSLSCNSCDYKAESKEQWEAHVESHNASQILLQCKLCNYNTHNKYYLTIHMKTHSEARPFSCNLCDYKAKRKVLLKTHILTHTASKNLKVTHSEARPFSCDLCDYKSININNLRKHKKVHSAARPFSCYSCDYKAKTKDMLISHIRIHSARNISCALCNYKCSNKYSLKNHMEKHTREIEYSCSVCDYKTFQKYHFRKHTKFHDDTSLFQCDKCGNTFKNKTYLINHIKQHHISDKPFKCTVCDYACISKGILKKHINVIHDRVKRFSCEFCDYKCFGKSSITHHRRSHTGEKPFKCNVCDYKASIKTHLVNHMRTHTGEKPFSCEFCGYRASFKPNVQDINLTTEENLDSDTSIKIEYHEIPEDNSKKLDTSINQWKSLSDKGPLENADDKKLPHRKVKTLFQCKMCDFNTHNKRYLPKHMKIHFEAKLKARRRRRSIQTFSCDLCDFTTRINACLIKHKILTHSEGRPLSCNSCDYKTESKEQWKAHVQTHSSVPRKFTCDLCDYRTHLNAYLIKHKFLTHSEGKSLSCNSCDYKAESKEQWEAHVQTHPSRRFTCDLCDYKTNLNAHLIKHKFLTHSEGKSLSCNSCDYKAESKEQWEAHVESHNASQILLQCKMCNYNTHNKSYLFRHMKTHSEARPFSCNLCDYKAKRKVLLKTHILTHTASKNLKVTHSEARPFSCDLCDYKSINIINLRKHKKIHSAARPFSCYSCDYKAKSKFMLISHIRIHSAPNISCALCDYKCSTKYMLKNHMQNHTREIEYRCSLCDYKTFQKNYFRMHMKFHEETTLFQCDKCGNTYKTKTSLDNHIKQHHTSDKPFKCGICDYACISKGILKKHINVIHDREKRFSCEFCDYKCFGKSSITQHRRIHTGEKPFKCNVCDYKSALKQGLRCHMRTHTGEKPFSCEFCGYRAAFKPNVKLHIQRVHSNEMPFSCKLCDFKSKYQRHLKKHMETHDKNGEGNSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-