Mser021074.1
Basic Information
- Insect
- Malthinus seriepunctatus
- Gene Symbol
- -
- Assembly
- GCA_963924605.1
- Location
- OZ004604.1:22168019-22186990[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.0035 0.24 12.4 3.9 1 23 186 208 186 208 0.98 2 33 0.029 2 9.5 1.2 1 23 258 280 258 280 0.95 3 33 0.022 1.6 9.8 0.6 1 23 365 387 365 387 0.97 4 33 0.056 3.9 8.6 1.5 1 23 470 492 470 492 0.96 5 33 0.035 2.5 9.2 2.2 1 23 537 560 537 560 0.96 6 33 8.8e-05 0.0062 17.4 1.2 1 23 609 631 609 631 0.98 7 33 0.012 0.81 10.7 3.1 3 23 688 708 686 708 0.97 8 33 0.00028 0.02 15.8 3.6 1 23 714 736 714 736 0.98 9 33 0.00024 0.017 16.1 0.7 1 23 742 764 742 764 0.98 10 33 0.0002 0.014 16.3 0.9 1 23 770 792 770 792 0.98 11 33 8.2e-05 0.0057 17.5 5.3 1 23 798 820 798 820 0.98 12 33 0.00014 0.01 16.7 1.0 1 23 833 855 833 855 0.93 13 33 0.042 3 9.0 3.8 1 23 861 883 861 883 0.94 14 33 0.13 8.7 7.5 6.6 1 23 889 911 889 911 0.99 15 33 7.2e-05 0.005 17.7 2.0 1 23 920 942 920 942 0.98 16 33 0.0056 0.39 11.7 2.4 1 23 1133 1155 1133 1155 0.98 17 33 0.00021 0.015 16.2 1.0 1 23 1204 1226 1204 1226 0.98 18 33 0.0015 0.1 13.6 1.3 1 23 1281 1303 1281 1303 0.96 19 33 0.0031 0.21 12.6 0.8 1 23 1309 1331 1309 1331 0.98 20 33 0.00012 0.0081 17.0 1.6 1 23 1337 1359 1337 1359 0.98 21 33 0.0028 0.2 12.7 2.2 1 23 1365 1387 1365 1387 0.97 22 33 0.00062 0.043 14.7 5.4 1 23 1393 1415 1393 1415 0.98 23 33 9.6e-05 0.0067 17.3 0.6 1 23 1435 1457 1435 1457 0.94 24 33 0.0023 0.16 12.9 2.9 1 23 1463 1485 1463 1485 0.94 25 33 1.8 1.3e+02 3.8 9.1 1 23 1491 1513 1491 1513 0.99 26 33 6.7e-05 0.0047 17.8 2.2 1 23 1522 1544 1522 1544 0.98 27 33 0.035 2.5 9.2 0.5 1 23 1632 1654 1632 1654 0.97 28 33 0.00019 0.013 16.4 0.7 1 23 1719 1741 1719 1741 0.94 29 33 0.0026 0.18 12.8 2.4 1 23 1747 1769 1747 1769 0.94 30 33 0.0042 0.29 12.1 4.0 1 23 1776 1798 1776 1798 0.98 31 33 0.047 3.3 8.8 0.3 1 23 1807 1829 1807 1829 0.97 32 33 7.6e-06 0.00053 20.8 0.3 1 23 1835 1857 1835 1857 0.99 33 33 0.05 3.5 8.7 7.6 1 23 1863 1885 1863 1885 0.98
Sequence Information
- Coding Sequence
- ATGAGTTATAACACAACTGCTCGAGCCAGTAATTCCATCgatgaagataaaattaaactaGAAAATTTAGAATGGGAAAAAACTCCTTTCGATTTAGgaactATAAAAGACGAAGAATTTCCAATTGAAGAAAAGCATAATCGCGATGAAATTGGTAACCACAAGAATGATACAGTTTCAATAATCACGAAGCCAACAATCCTTAATTCTAAGTCCACCGATAACTTAAGAATGTGTACCGTATGTGGGTTACATTGTTTAAACGATGATATATTACAAATTCATATAAAAACGCATAACACCTTAAAGTATTACGAATGTGATTTTTGCAACTATAAAAaagCGCACATATTAAAACATAATAACAAGACTATAAATATTCAACTGGAGGagtattataaaagaaaagaatcAAGTATTTACTATAATAATGCAATTGCTGAGCTATGTCAAGGGACAGTTGATGAGAATTCGTACGAAACAATTTTAGAAGAACCTAAAACTTGTACTATTGGGCCTGAAAGCtctaaaaagcaaaaaatggAGACGAAAGAATATTGTTGTGAAAAATGTGGTTTGCTATTCTCCACAAGAAAATCGTTAGATACCCATCTCAAAAAACATACTACCAAGCAACAATTCACTTGCAAGCTTTGTGATAACAAAGTAACACCTGCAGAAAAACGAAAAAAGTGCTATAATTGTGAAAAGGGTTTTAGATGTAAAAATTGTTTGGCAGTTCATAAGAGCCAGTGTACTCAAGGAAAACAATTCTTGTGTGAAATATGTGGTATTCAGTGTACCAATTCCATTTTCTTAGACGTTCATTATCGCAAACATACTGGCGAGAGACCATTTCCTTGTGAACTTTGTAACTTTAAAGCTAAAAgacCTATCAAAGACGAAGAATTAATAGCTGAAGAAAAGCATATCATCGATGTAATTGGAAATGAGGAAATAGATTACGGTGAGAATAACACAAGTGATGTAGTTTCAATCGTTAAGAAGACAACAGGCAATAattctcaatcaaaagataaCTTACAAGCATCCACAGAAGCTTCAAAAACTCTAAAAACAGAGATAAGACACTACTTTTGTGACATATGTGGTATGTTGCTCACCTCAAGAGGCTCTTTCAATACGCATTACGATACACATGAAAAATCTGTTTCTTACAAGCATTgtgattataatttaaaacatacAGGAAAGCAAATTGTTGTAATTGAAAATAAGAGAATTGATAAGGATAAGAAAAGCCAAAACGATACTGTTTCAGTAGTTGAAGAAACGACatgtaaacaattaaattacaagAATTCGTGCAAATCAAATCTAGGAAAAGATAATGTTTGTGTTAATAGCCCTAAAAGCtgccaaataaaaataacggaGACGAAACCTTATTGTTGTGATATATGTGGTCTGTTATTCACCACAACAGATTTTTTCCTTATTCATTACAATGCGCATGGAAAATGTGTTTATTGCCAGCTTAGTGATTATAAGCCAAAACCTGaagataaattatttatgtgcTCTAATTGTAATAAAAGAAGAAATGAAGAAACTGATAATAGCTCTAAAAAACTGGAAACTGAGACGTATTTTTGTGAAATATGTGGTCTGTTATACACCAAAAAAAGAAGTTTCGAGAACCATTATTCCAGAAAACATTCCACGAAACCATTTACTTGTAAAATTTGTGATTACATAACAAACGCTGAAGAAAAACAAGGCAGATGTAACAAATGTGATAAACGTTTTAGATGTCTAAATTGTTGCACGGTTCATAAGAGTCAGTGTACTCGGGGGAGAAAATACTTCTGTGAAATATGTGGTCTGTTATTCACTACAAAAACAGATTTTAACGCCCATTACAAAACACATACTGTGGAAAAACCATTTGCTTGTAAAGTTTGTGATTACATAACAAACCCTGAAGAAAAACGATTTAGCAGACGTTGTGgtaaatgtaataaatgttttagatGTGAAAATTGTTATACAGTTCATAAAAGGCAATGTACTCGGAAGAGAGTGAAAAGACAATGCTTGTGTGAAATATGTGGTGCTAAGTGTAGTAGTCCCTTTTTCTTAAACGCTCATTATCGAAAACATACTGGTGAAAGACCATTTCCTTGTGAGCATTGTAACTTTAGAGCTAAAACTAAAAGCTATCTGCTAAAACATATGCAAACacatacaaaagaaaaaaattataaatgtgaaATTTGTTCCCTCTCATTTACATTTGCTATGAGTTTTAATCGTCATCTTGAAATTCATACCAGTACTAAAAGATTTAGTTGTTCTGTTTGTAAAGCCAGGTTTCGTCAAAAAGTGACACTAACGCAGCACTTATTAGTACATactggagaaaaaccatttaaatgcaATGATTGTGATTATTGCTGTAGAAATAAAGCTTACTTAACAGCCCATATGGTACGACATACCGGTGTAAAACTTAAACGTCATGGTGAAAAACGCTTTATGTGTAATGTTTGTAATAAAACCTTTATGAGAAAACAAACATTATCAGCCCATATGCCTACACACACTGGAGAAACACCATTCAAATGCAATGTTTGTGATTACTCTTGTACATCTAGAGCTCGCTTAACATACCATAAGGTACAACATAGTGGTGTAAAATCATTTAAGTGTCACTTCTGCGATTACAGTACTGCATACTATAGTCGTTTATACAATCATAAAAGAAAACATGCGGATCCTGCCactgttaaaaaattcgaaTGTGATAAATGTGATTATAGAAGCACGTTGAAAGATAACTTGAAACGGCATAGACGAGTTCATACTGgacCTATCAAAGACGAAGAATTAATAGCTGAAGAAAAGCATATCATCGATGTAATTGGAAATGAGGAAATTGATTACGGCAAAAATAACACAAGTGATGTAGTTTCAATCGTTAAGAAGAAAACAGACAATAATTCTCAATCAAACGATAACTTACAAGCATCTACAGTAAGTgcatgtaaattattaaatggagTTGGCTTATTAACAAAACCCAAAGCGAATACATTTAAGTGTGATCTGGATCTACGTGgtttcaaaactaaaatacaATTTCTCATCGACACACACATGAAACATAAAAATGCTACACCTACAGAAAAGCAAATTGTCGTAATTGGAAATGAGAGCATTGATAAGGATAAGAAAAGCCCAAATGATACCGTTTCAGTAGTTGAAGAAACGATATGCAACCAATTAAATTACAAGAATTCCTGCACATCAAATCTAGAAAAACATAATGTTTGTGTTAATAGCCCTAAAAgctgtaaaacaaaaataacggAGACGAAACCTTATTGTTGTGAAGAAACTGATAATAGCTCTAAAAAACTGGAAACTGAGACTTATTTTTGTGAAATATGTGGTCTGTTATACACCAAAAAAAGAAGTTTCAATGACCATTACAGAAAACATTCCATGAAACCATTTACTTGTAAAATTTGTGATTACATAACAAACCCTGAAGAAAAACAAGGCAGATGTAACAAATGTGATAAACGTTTTAGATGTCTAAATTGTTGCACGGTTCATAAGAGTCAGTGTACTCGGGGGAGAAAATACTTCTGTGAAATATGTGGTCTGTTATTCACCACAAAAACAGGTTTTAACGCCCATTACAAAACACATACTGTGGAAAAACCATTTACTTGTAAAGTTTGTAATTACATAACAAACCTTGAAGAAAAACGATTTAGCAGACATTGTGgtaaatgtaataaatgttttagatGTGAAAATTGTTATACCGTTCATAAAAGGCAATGTACTCGGAAGAGAGTGAAAAGACAATACTTGTGTGAAATATGTGGTGCTAAGTGTAGTAGTCCCTTTTTCTTAAACGCTCATTATCGAAAACATACCGGTGAAAGACCATTTCCTTGTGAACTATGTAACTTTAAAGCTAAAGCTAAAAGCTATCTGCTAAGACATATGCAAACacatacaaaagaaaaaaattataaatgtgaaATTTGTTCCCTCTCATTCTCATTTGTTGAGAATTTAAATCGTCATCATCTAATTCACACGGGTACTAAAAGATTTAGTTGTTCTGTTTGTAAAGCCAGGTTTCATCAAAAAGGATCACTAACGCAGCACTTATTATTACATactggagaaaaaccatttaaatgcaATGTTTGTGATTATTGCTGTACAACTAAAGGTCGCTTAAAAATCCACATGGCACGACATACCGGTGTAAAACTTAAACGTTATGGTGAAAAACATAAACGTCATGGTGAAAAACCCTTTACGTGTAATGTTTGTAATAAAACCTTTATGAGTAAACAAACATTAGCAGCCCATATGCCTACACATACTGGAGAAAAACCATTCAAATGCAATGTTTGTGATTACTCATTTACATCTAGAACTCGCTTAACATACCATAAGGTTCAACATAGTGGTGTAAAATCATTTAAGTGTCACTTCTGCGATTTCAGTACTGCATACTATAGTCGTTTATACCATCATAGAAAAAAGCATTTGGATCCTGTCactgttaaaaaattcgaaTGTGATAAATGTGATTATAGAAGCACGTTCAAGGAGAACTTGAATCGGCATAGGCGAGTTCATACTGgacCTATCAAAGACGAAGAATTAATAGCTGAAGAAAAGCATATCATCGATGTAATTGGAAATGAGGAAATTGATTACGGTGAGAATAACACAAGTGATGTAGTTTCAATCGTTAAGAAGACAACAGGCAATAATTCTCAATCAATCGATAACTTACAGGCATCTACAGTAAGTGCATGTCAATTATTAAATGGAGTTCGTTTATTAACAAAACCCGAAGCGAAGACATTTGAGTGTAATGAAACGGAGAAAAGACAGTACTTTTGTGAAATATGTGGTCTGTTATTCACCACAAAACCTCCTTTCGATACGCATTACAGTACACATGAAAGATCTGTTTCTTACAAGCGttgtaattataattcaaaaccTACAGGAAAGCAAATTGttgtaattgaaaataaaagaattggTAAGGATAAGAAAAGCCCAAACGATACTGTTTCAGTAGTTGAAGAAACGACatTCCATATGGTACGACATACCGGTGTAAAACTTAAACGTCCTGGTGAAAAACGCTTTACGTGTAATGTTTGTAATAAATCCTTTATGTATAAACAAACATTAGCAGCCCATATGCCTACACACACTGGAGAAACACCATTCAAATGCGATGTTTGTGATTACTCTTTTACATCTAGAACTCGCTTAACATACCATAAGGTACAACATAATAGTGATGTAAAATCATTTAAGTGTCACATCTGCGATTACAGTACTGCATACCCTAGTCGTTTATACaatcataaaaaaaaacatgcaGATCTTTCCACTGTTAAGACATTCGAATGTGAAAAATGTGATTATAAAACCCCGTACAAAGCAATTTTGAAAAGGCATGTGCTTGTCCATACTGGTGAGAAACCCTATCAATGTAGAATATGTTGGGCTAAATTTTCTCAGCCAAGTGGTTTAAAAATTCATATGAACAAACACACtggagaaaaaccttttcatTGTAATTTATGTGATTATAAATGCactaaaaaacaatatttagcTAAACATCAATTGAAACATTCTTCTAACAAGGAATGA
- Protein Sequence
- MSYNTTARASNSIDEDKIKLENLEWEKTPFDLGTIKDEEFPIEEKHNRDEIGNHKNDTVSIITKPTILNSKSTDNLRMCTVCGLHCLNDDILQIHIKTHNTLKYYECDFCNYKKAHILKHNNKTINIQLEEYYKRKESSIYYNNAIAELCQGTVDENSYETILEEPKTCTIGPESSKKQKMETKEYCCEKCGLLFSTRKSLDTHLKKHTTKQQFTCKLCDNKVTPAEKRKKCYNCEKGFRCKNCLAVHKSQCTQGKQFLCEICGIQCTNSIFLDVHYRKHTGERPFPCELCNFKAKRPIKDEELIAEEKHIIDVIGNEEIDYGENNTSDVVSIVKKTTGNNSQSKDNLQASTEASKTLKTEIRHYFCDICGMLLTSRGSFNTHYDTHEKSVSYKHCDYNLKHTGKQIVVIENKRIDKDKKSQNDTVSVVEETTCKQLNYKNSCKSNLGKDNVCVNSPKSCQIKITETKPYCCDICGLLFTTTDFFLIHYNAHGKCVYCQLSDYKPKPEDKLFMCSNCNKRRNEETDNSSKKLETETYFCEICGLLYTKKRSFENHYSRKHSTKPFTCKICDYITNAEEKQGRCNKCDKRFRCLNCCTVHKSQCTRGRKYFCEICGLLFTTKTDFNAHYKTHTVEKPFACKVCDYITNPEEKRFSRRCGKCNKCFRCENCYTVHKRQCTRKRVKRQCLCEICGAKCSSPFFLNAHYRKHTGERPFPCEHCNFRAKTKSYLLKHMQTHTKEKNYKCEICSLSFTFAMSFNRHLEIHTSTKRFSCSVCKARFRQKVTLTQHLLVHTGEKPFKCNDCDYCCRNKAYLTAHMVRHTGVKLKRHGEKRFMCNVCNKTFMRKQTLSAHMPTHTGETPFKCNVCDYSCTSRARLTYHKVQHSGVKSFKCHFCDYSTAYYSRLYNHKRKHADPATVKKFECDKCDYRSTLKDNLKRHRRVHTGPIKDEELIAEEKHIIDVIGNEEIDYGKNNTSDVVSIVKKKTDNNSQSNDNLQASTVSACKLLNGVGLLTKPKANTFKCDLDLRGFKTKIQFLIDTHMKHKNATPTEKQIVVIGNESIDKDKKSPNDTVSVVEETICNQLNYKNSCTSNLEKHNVCVNSPKSCKTKITETKPYCCEETDNSSKKLETETYFCEICGLLYTKKRSFNDHYRKHSMKPFTCKICDYITNPEEKQGRCNKCDKRFRCLNCCTVHKSQCTRGRKYFCEICGLLFTTKTGFNAHYKTHTVEKPFTCKVCNYITNLEEKRFSRHCGKCNKCFRCENCYTVHKRQCTRKRVKRQYLCEICGAKCSSPFFLNAHYRKHTGERPFPCELCNFKAKAKSYLLRHMQTHTKEKNYKCEICSLSFSFVENLNRHHLIHTGTKRFSCSVCKARFHQKGSLTQHLLLHTGEKPFKCNVCDYCCTTKGRLKIHMARHTGVKLKRYGEKHKRHGEKPFTCNVCNKTFMSKQTLAAHMPTHTGEKPFKCNVCDYSFTSRTRLTYHKVQHSGVKSFKCHFCDFSTAYYSRLYHHRKKHLDPVTVKKFECDKCDYRSTFKENLNRHRRVHTGPIKDEELIAEEKHIIDVIGNEEIDYGENNTSDVVSIVKKTTGNNSQSIDNLQASTVSACQLLNGVRLLTKPEAKTFECNETEKRQYFCEICGLLFTTKPPFDTHYSTHERSVSYKRCNYNSKPTGKQIVVIENKRIGKDKKSPNDTVSVVEETTFHMVRHTGVKLKRPGEKRFTCNVCNKSFMYKQTLAAHMPTHTGETPFKCDVCDYSFTSRTRLTYHKVQHNSDVKSFKCHICDYSTAYPSRLYNHKKKHADLSTVKTFECEKCDYKTPYKAILKRHVLVHTGEKPYQCRICWAKFSQPSGLKIHMNKHTGEKPFHCNLCDYKCTKKQYLAKHQLKHSSNKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -