Basic Information

Insect: Malthinus seriepunctatus
Gene Symbol: -
Assembly: GCA_963924605.1
Location: OZ004602.1:9828069-9830549[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00012 0.0084 17.0 0.2 1 23 9 32 9 32 0.97

2 17 0.00034 0.024 15.6 3.9 1 23 37 59 37 59 0.98

3 17 0.00063 0.044 14.7 4.6 1 23 68 90 68 90 0.98

4 17 1.1e-05 0.00077 20.3 0.5 1 23 99 121 99 121 0.97

5 17 3.2e-07 2.3e-05 25.1 0.2 1 23 127 149 127 149 0.98

6 17 8.7e-07 6.1e-05 23.7 2.9 1 23 155 177 155 177 0.98

7 17 4.3 3e+02 2.7 0.4 1 9 183 191 183 193 0.86

8 17 0.045 3.2 8.9 4.2 1 23 213 236 213 236 0.96

9 17 0.00031 0.022 15.7 1.7 2 23 242 264 241 264 0.95

10 17 0.012 0.82 10.7 0.4 1 23 272 294 272 294 0.94

11 17 4.9e-06 0.00034 21.4 3.7 1 23 301 324 301 324 0.98

12 17 9.4e-05 0.0066 17.3 3.1 1 23 329 351 329 351 0.98

13 17 0.0022 0.15 13.0 1.6 1 23 360 382 360 382 0.99

14 17 2.2e-05 0.0016 19.3 1.1 1 23 391 413 391 413 0.97

15 17 6.2e-07 4.3e-05 24.2 2.3 1 23 419 441 419 441 0.99

16 17 8.7e-07 6.1e-05 23.7 2.9 1 23 447 469 447 469 0.98

17 17 1.5e-07 1e-05 26.1 2.0 1 23 475 497 475 497 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00012	0.0084	17.0	0.2	1	23	9	32	9	32	0.97
2	17	0.00034	0.024	15.6	3.9	1	23	37	59	37	59	0.98
3	17	0.00063	0.044	14.7	4.6	1	23	68	90	68	90	0.98
4	17	1.1e-05	0.00077	20.3	0.5	1	23	99	121	99	121	0.97
5	17	3.2e-07	2.3e-05	25.1	0.2	1	23	127	149	127	149	0.98
6	17	8.7e-07	6.1e-05	23.7	2.9	1	23	155	177	155	177	0.98
7	17	4.3	3e+02	2.7	0.4	1	9	183	191	183	193	0.86
8	17	0.045	3.2	8.9	4.2	1	23	213	236	213	236	0.96
9	17	0.00031	0.022	15.7	1.7	2	23	242	264	241	264	0.95
10	17	0.012	0.82	10.7	0.4	1	23	272	294	272	294	0.94
11	17	4.9e-06	0.00034	21.4	3.7	1	23	301	324	301	324	0.98
12	17	9.4e-05	0.0066	17.3	3.1	1	23	329	351	329	351	0.98
13	17	0.0022	0.15	13.0	1.6	1	23	360	382	360	382	0.99
14	17	2.2e-05	0.0016	19.3	1.1	1	23	391	413	391	413	0.97
15	17	6.2e-07	4.3e-05	24.2	2.3	1	23	419	441	419	441	0.99
16	17	8.7e-07	6.1e-05	23.7	2.9	1	23	447	469	447	469	0.98
17	17	1.5e-07	1e-05	26.1	2.0	1	23	475	497	475	497	0.99

Sequence Information

Coding Sequence: ATGCATACCCGCAATAATTGTAGATATAAGTGTGATCAATGTGATAAAGGTTATTACCAAAAACAAGTTTTAGAAGCCCATATTGCAAGAGTGCACGCAGGGTACCGATTCGAATGTGAAACTTGTCATAAATTGTATTCTACATTAAATAATCTTCGGCAACACAAACGATTACACGATCCAAATTATGTTAAGATGACGTTCTCTTGCAAAATATGCAATAAGATATTGTGCAGTCGCGGAAGTTTCAGGAAGCATTTGAAAAACCACCAGGGACTTAACAATCAAAGTCGTTACATTTGTTACCTTTGTGGAAAAAGTGTTACAAGGAAACGTAGCTTAGAGACGCACATTAAAGCTCATAATAACGATAAACAATTTGTTTGTGATACTTGTGGTAAAGCTTTTGTagatagaaaatatttaattactcaTATACGCATACACACTAAAGAAAAACCTTACAAGTGCACAATTTGTGATAACTGTTTCACTCAAAGGAGTTCGTTAAGTATTCATATGAGAGGACACACTGGAGAAAAACcttataaatgtaaaatttgtgAAATGTCAATCAAAATTAAATGTGTTGAAGTGGATAATGACATTGAGGATTCATTGGAAAATGTGAAAAAACATGAATGTAAAatttgtaacatattttttcacgAATATAGAGAACTAGTAAATCATCGAAACCGCTCGCATAGAATTCAAAAAAGTCCTTGTGATTTGTGTGACAAAAAGTTCTATACTAATTATCgtcttaaaaatcataaattgaGAATGCACACTGGAGATCTTCCACGTTCATTTTTATGTGACGTTTGTAACAAGGGCTTTACATCTgacacaattttgaaaatacatcaGTCAAGCCATGCTCGCAATACTTTGAGATATAAGTGCGATCAATGTGGCAAACGTTGTAACCATAAACAAAACTTAGAAAACCATATTGCAACAGTACACGCAGGGGTACAATTTGAATGTGAAACTtgtcataaattttattcttcacTCAACAGTCTCCAAGTACACAAACGTATACACGATCCAAACTATGTTAGCAAAGAGTACACGTGTGAAATATGCAATATGATATTGTATAATCGCACCACTTATAGGAATCATTTGCAAAAACACAAGGGAGTTGACAACCAAAGCTGTTACATCTGTTACATTTGTGGGAAAAGTGTTACATCGAAATGTAGTTTAGAGACGCATATTAAAGCTCATAATAATGACAAACAATATGTTTGTGATACTTGCGGTAAAGCGTTtgtacataaaaaatatttaattactcaTACACGCACACACACTAAAGAAAAACCTTATAAGTGCACGATTTGTGATAACTGTTTCACTCAAAGGAGTTCGTTAAGTATTCATATGAGAGGACACACTGGAGAAAAACCTTATAAATGTCAAATTTGTGAAAAGTCGTTTGTTAGTAACAGTTCGTTAAAATCTCACATGACAAAacattaa
Protein Sequence: MHTRNNCRYKCDQCDKGYYQKQVLEAHIARVHAGYRFECETCHKLYSTLNNLRQHKRLHDPNYVKMTFSCKICNKILCSRGSFRKHLKNHQGLNNQSRYICYLCGKSVTRKRSLETHIKAHNNDKQFVCDTCGKAFVDRKYLITHIRIHTKEKPYKCTICDNCFTQRSSLSIHMRGHTGEKPYKCKICEMSIKIKCVEVDNDIEDSLENVKKHECKICNIFFHEYRELVNHRNRSHRIQKSPCDLCDKKFYTNYRLKNHKLRMHTGDLPRSFLCDVCNKGFTSDTILKIHQSSHARNTLRYKCDQCGKRCNHKQNLENHIATVHAGVQFECETCHKFYSSLNSLQVHKRIHDPNYVSKEYTCEICNMILYNRTTYRNHLQKHKGVDNQSCYICYICGKSVTSKCSLETHIKAHNNDKQYVCDTCGKAFVHKKYLITHTRTHTKEKPYKCTICDNCFTQRSSLSIHMRGHTGEKPYKCQICEKSFVSNSSLKSHMTKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -