Mser003532.1
Basic Information
- Insect
- Malthinus seriepunctatus
- Gene Symbol
- ZFX
- Assembly
- GCA_963924605.1
- Location
- OZ004600.1:52215588-52220244[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.018 1.2 10.2 3.7 3 23 182 202 181 202 0.98 2 22 2.3e-05 0.0016 19.2 1.9 1 23 208 230 208 230 0.98 3 22 0.00022 0.015 16.2 1.5 1 23 236 258 236 258 0.98 4 22 0.028 2 9.5 0.1 1 23 264 286 264 286 0.95 5 22 0.0087 0.61 11.1 2.5 1 23 293 315 293 315 0.99 6 22 0.023 1.6 9.8 0.8 1 23 321 344 321 344 0.91 7 22 0.00013 0.0091 16.9 5.4 1 23 350 373 350 373 0.95 8 22 0.00076 0.053 14.5 0.1 3 23 384 404 383 404 0.97 9 22 2.1e-05 0.0014 19.4 0.3 1 23 410 432 410 432 0.98 10 22 9.8e-06 0.00068 20.4 4.7 1 23 438 460 438 460 0.96 11 22 2.6e-07 1.8e-05 25.4 0.7 1 23 466 488 466 488 0.99 12 22 0.00095 0.066 14.2 5.6 2 23 545 566 544 566 0.97 13 22 0.00045 0.032 15.2 1.2 1 23 572 595 572 595 0.94 14 22 0.00045 0.031 15.2 4.3 1 23 602 624 602 624 0.98 15 22 0.00097 0.068 14.1 3.1 3 23 632 652 630 652 0.98 16 22 3.1e-05 0.0022 18.8 0.4 1 23 660 682 660 682 0.98 17 22 6.7e-07 4.7e-05 24.1 3.1 1 23 688 711 688 711 0.97 18 22 1.7e-06 0.00012 22.8 0.2 1 23 717 739 717 739 0.98 19 22 1.8e-05 0.0013 19.5 3.7 1 23 748 771 748 771 0.97 20 22 3.5e-05 0.0025 18.7 1.3 1 23 777 799 777 799 0.98 21 22 9.7e-06 0.00068 20.4 1.9 1 23 805 827 805 827 0.98 22 22 3.5e-05 0.0024 18.7 1.9 3 23 835 855 833 855 0.98
Sequence Information
- Coding Sequence
- atgGAATCGTTTACACAGTACGAACAGTTACAAATAGAAGAAGTGTGCAGAATATGTTTAactaaagaaaatgaaatgaaCTTAATTTGTGACACTGGACTTGCAGATATGTTATTAGAATGTGCTTCGATACAAgTAACTCCAGACGATGGTctctttaatttagtttgtaaTCAATGTGCTAACGAAGTTAGCCGTTGGTATGTTTTTAAACAGCAAATTATTAGATCCTTTGAAATAGGACGTTGgctgttaaataaaaaatccaaaagcgCCTTTAATGACGACAATGAGATCAAAATTGAATATACTTTTGACAACGATGAAAATTCTAATTCAATTATTGATGACGTAGAggagttacaaaaaatattaatcaaatattCCCCTAATTCGCTAACTAAAGAAGAGTGTTTAGCAACTACTACTACAGTTAACACCGATTCTATAATTGAAACAATCAATAATGTAGCTATAAATGATACTGCTGTTTCAAATAATACTTCGACAGAGAAAGTTAGAAAAAAACCTAAGGATTTATTATGTAGGACGTGTGGTAAACAGTGTATTTCTACAAACTCTTACAATAGACATGTAAGAACGCACGATGATTCGAGACCTTATAGCTGTTCAAAATGTGATAAATCGTTTAAAACAACACAAGTTTTAGTCGAACATATGAAACGTCATTATGATGATCGGAGACACAAATGTGGTGTTTGTGAgcaaaaattttatgcaaaagcTAGTCTAAATGATCACATGAGATCtcatactggtgaaaagcctTTTAAATGTGAAGTCTGTTTAACATCCTTTGCTACCCGAGCAATTTTAAGACAACATGTTGttgtccACACGCCGAGACAAAAAAGATTTCAATGTCACATATGCAGTAAATTTCTTTTAACTCCTGGCAGTTTAGAAACACACAAACGTAAACATACAGGAATTAAACCTTTCAAATGTTCCGGTTGTGAGAACtcttattttacaaaagaagCTATGCAAAGACATTTTAGTGCAATTCACGATactgataataattatttgtgtaaTATCTGTTCTAAAGTGTGTAATACAAAAGTACATTTAAATAATCATATGAAAAAGACACATTTAGGCCTTGGTCGACCTGCAAATGCCATTTGTGTTGATTGTGGTAAGCAGTGTGGTTCGGCTGCTGAATTAAAGGTTCACGTGCGTATTCATACTGGAGAAAGGCCATATGTTTGTGATATTTGCGATAAACGATTTATAGCTAGAGGAAATTTAAATTCTCATAAACTAAGACATTCTGGTAAAAAACCATTTTTGTGTAATCACTGTGGAAAATGTTTTGGAGAAAAGTCGACGTTAAAAGTCCACCAGAGAATTCATACTGGAGAATATCCATATACTTGTCGTATTTGTGACAAATCTTATACTCAAAGTGGTGCACTTAGTAGACATATGAAAATACATTCGAAaaaatcttACAACGCTCTTCACGACATacttaatgcaagaaaaaatgATTGTAATACTAACGAAAACGTTGATGCCTCCAtaccaaaaatatttaaaaagacttTAAAGAATTCCGAAATAGATTCAGCATTGGTTGCTTTAAAAGAACTAAATAAAGATTCAACATGTAGAATGTGCAATAAAACTTTTAGTTGTAAAGGACAATTAACAAGACATTTAAAAACGCATATAGGAATTCCAAGTCACATTTGTGAAATTTGCGGAAAATCCTACATGGAATCGGGATCTttgagaaaacattttttatccaAACATTCTGGTAGAGAAAAACCtcataaatgtttaaaatgtaacaaaagTTTCGATCTTAGATCAACTTTAATTCAACACAACAGAACTCACACTGGAGAAAAACCATTCGGATGCGATATTTGTCACAACTTTTATCCATCCAAATCTTATTTAAATAAGCACAGAAAGACGCATTTTGGCAAAAGAGAAAAGCTTTTTATTTGCGAAATATGTAGTAAATCCTTCTATTTAAAAGATGGACTAAAAGCTCACTTAACTACACACTCGGATGAGCGACCGTATCAATGTAATGAGTGCGataaaacattttctaaaaaagggTCGCTTAAATCTCATATCAAACATATTCAtacgaaagaaaaaaattttatatgccAAGTATGTGCAAAAGCATTTGTAACATTATCTGAATTAAAGGAACACATGAGAACACATACGGGAGAAAAGAAAGAAGCTAAACATTCTTGTACaatatgtaataaaatgttatcTTCATCCTCGCATTTGAAGTTACACATACGTTCGGAACATACTGGAGAAAGGCCATATAGGTGTAATTTTTGTTCGAAGACGTTCATAACTGCTCAAGCTTTGAAAATTCACGAAAGGtatcatacaggtgaaaaaccttatTCTTGCAAATATTGTGAAAAGAAGTTTGTTACCAATGAAAGTACAAAAGTGCACATGCGAATtcatactggtgaaaagccttttggatgctttatatgCAATTCGTCGTTCTCACAAAGTAGTACCCTTAAAACTCATATGAAGAGTCATCAATAA
- Protein Sequence
- MESFTQYEQLQIEEVCRICLTKENEMNLICDTGLADMLLECASIQVTPDDGLFNLVCNQCANEVSRWYVFKQQIIRSFEIGRWLLNKKSKSAFNDDNEIKIEYTFDNDENSNSIIDDVEELQKILIKYSPNSLTKEECLATTTTVNTDSIIETINNVAINDTAVSNNTSTEKVRKKPKDLLCRTCGKQCISTNSYNRHVRTHDDSRPYSCSKCDKSFKTTQVLVEHMKRHYDDRRHKCGVCEQKFYAKASLNDHMRSHTGEKPFKCEVCLTSFATRAILRQHVVVHTPRQKRFQCHICSKFLLTPGSLETHKRKHTGIKPFKCSGCENSYFTKEAMQRHFSAIHDTDNNYLCNICSKVCNTKVHLNNHMKKTHLGLGRPANAICVDCGKQCGSAAELKVHVRIHTGERPYVCDICDKRFIARGNLNSHKLRHSGKKPFLCNHCGKCFGEKSTLKVHQRIHTGEYPYTCRICDKSYTQSGALSRHMKIHSKKSYNALHDILNARKNDCNTNENVDASIPKIFKKTLKNSEIDSALVALKELNKDSTCRMCNKTFSCKGQLTRHLKTHIGIPSHICEICGKSYMESGSLRKHFLSKHSGREKPHKCLKCNKSFDLRSTLIQHNRTHTGEKPFGCDICHNFYPSKSYLNKHRKTHFGKREKLFICEICSKSFYLKDGLKAHLTTHSDERPYQCNECDKTFSKKGSLKSHIKHIHTKEKNFICQVCAKAFVTLSELKEHMRTHTGEKKEAKHSCTICNKMLSSSSHLKLHIRSEHTGERPYRCNFCSKTFITAQALKIHERYHTGEKPYSCKYCEKKFVTNESTKVHMRIHTGEKPFGCFICNSSFSQSSTLKTHMKSHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -