Mser003533.1
Basic Information
- Insect
- Malthinus seriepunctatus
- Gene Symbol
- ZFX
- Assembly
- GCA_963924605.1
- Location
- OZ004600.1:52221011-52224569[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 1.2e-05 0.00081 20.2 1.6 2 23 152 173 151 173 0.97 2 22 4.7e-07 3.3e-05 24.5 0.6 1 23 178 200 178 200 0.99 3 22 1.1e-05 0.00076 20.3 1.8 1 23 206 228 206 228 0.96 4 22 2.3e-05 0.0016 19.2 3.7 1 23 234 257 234 257 0.97 5 22 1.1e-06 7.9e-05 23.4 0.3 1 23 263 285 263 285 0.98 6 22 3.6e-05 0.0025 18.6 2.7 1 23 291 314 291 314 0.97 7 22 0.00018 0.013 16.4 0.4 1 23 320 342 320 342 0.98 8 22 0.00019 0.013 16.4 5.4 1 23 351 374 351 374 0.97 9 22 3e-05 0.0021 18.9 3.4 1 23 380 402 380 402 0.98 10 22 3.2e-06 0.00022 21.9 0.9 1 23 408 430 408 430 0.98 11 22 0.00034 0.023 15.6 2.6 1 23 556 578 556 578 0.97 12 22 0.00072 0.05 14.5 4.2 1 23 585 607 585 607 0.98 13 22 0.00018 0.012 16.5 0.2 1 23 613 636 613 636 0.97 14 22 0.038 2.7 9.1 1.9 1 23 641 664 641 664 0.95 15 22 0.0024 0.17 12.9 3.9 3 23 675 695 674 695 0.98 16 22 1.6e-06 0.00011 22.9 2.5 1 23 702 724 702 724 0.99 17 22 0.0012 0.084 13.8 1.9 1 23 730 753 730 753 0.92 18 22 0.0033 0.23 12.5 1.1 1 23 758 781 758 781 0.95 19 22 0.00015 0.011 16.6 2.6 3 23 791 811 789 811 0.97 20 22 0.00012 0.0087 16.9 2.6 1 23 817 839 817 839 0.99 21 22 2.1e-06 0.00015 22.5 2.6 1 23 845 867 845 867 0.98 22 22 5.7e-07 4e-05 24.3 0.5 1 23 873 895 873 895 0.98
Sequence Information
- Coding Sequence
- atggaatcttttaaaaaatacgaaCAGTTACAAATTGACGAAATTTGTAGATTATGTTTAACAAAAACTGAACAAATGATTTTAATTTCTGAATCAGGAGTAACGGATATGTTACTAGAATGTGCTTCAATACAAGTATCAGAAGAAGATGGAATTTATTTAGTTTGTAGTCACTGCACCAATGAAATTAGTCGATGGTAtgtttttaaacaacaaattatGAACAGTTTTGAAATTGGTCAATGGTTAATTAATCAGagaaatcaaaaaatgaaagaaaatgattttaaatgtgATGAAGAGGTAAATGATGCTGACAATAAAACTAATTCCGGTGATATATTATTAAACGAATCAGAAACATCACGTGTACAAATGCAATCGATGAATGATATAAATGACACTAATCGTTTAGTTGATGATCATTTTGATGAAAATCAAAAAGAACTTATTAAATGTGAACATTGTGGGAAAGAATATAAAACTTCTAGTGCTTTATATAAACATGTGAGTAGTCATAATGAAAAATTATACGAATGTTCTAAATGTGACAAAGTTTTTAAACAAGCGCAAACATTAGCCGATCATATAAGACGTCATTACGATTCAAGAAACCACGCGTGTGATATTTgtggtaaaaagttttataaacaatttaatgttaccgaacacatgaggatccatactgGTGAAAGGCCATTTAACTGTAATCATTGTGAAAAAACTTTTACGAGAGCTTTGTTATTGAGGAATCAtattaaaaagACCCATACTGGTGAAAAGCAATATATCTGTGAAGTTTGTTCAAAGAGTTTTGTGGATGGTtatcaattaaaaatacatatgcGTACCcacactggtgaaaaaccattttcATGTAATCAGTGTCGTAAAACTTTTGCGATGCAAGGACAATTAAAATCTCATATGAAGTATAAGCACACTCGAGAGAAAGACTTCATTTGTAACGTTTGTGCTCGAGCATTTACTGCAAAACATACTCTGGAAGAGCACATACGAATTCATACAGGAATTAAAAAAGAACCACGACATAAATGTAATATTTGTAATAAGAAGTGCATAACTACGACGCAGTTAAAAACGCACATTCGTTCAGCTCATACAGGCGAGCGTCCTTTTAATTGTGACATgtgtgaaaaatgtttttttacaaaaactgctttagaatcGCATATAAAAACTCATACTGGAGAAAAGTCGTTTGTGTGCTGTGATTGTGGTAAAGCCTTTAGTGCAAAATCTAGTTTAAAAATACACGAAAGAATTCATACCGGTGAAAAACCTTACAAGTGCAATataaattctGAAAATGCCTTTATATGTAACAGCTGCGCTTCTGACGTTCGTCGTTGGTACGAGTTTAAAAAACAAGTCCTTCGGTCTCTTGAAATTGGTCGCTGGGTATTAAAACAAAGAaacgaaaagctcaaaattctTCCTGCATCCGAAACACCAATGATTAAAAGCGACGATTCTGAACAAAATCAATTTCCCGTTGAAAATGTTATAGTTAAAATGGAACAAAATGatgaaaatctaaatttaatagACACTCAAAACGGTATAAGCTGTGTTAAAGCCGAAAATGAAGATTTATCAGATGAAGAACCTAGTTGTAGTTCAGGGTCCATTAGTAGAGGAAATTATGCTTGTGATACATGTGGAAGAGTATGTAAATCTACACGTTTATTAAATAGACATAAAAAGATACATACTAATCGTGAAAGAAGATTTAAATGTGATATATGTTTTAAAGCTTATTTCAACTTATCACATTTGCAATATCATAAATTAACGCACGAGGAAGTTCGACCTTTTCAATGTGACAAATGTGAAAAGTCTTTTCTTACTAAAGCGCTGTTGCAAATTCATATCGAGTCTGCTCATGAAGGAATAAAGCACATATGTAAAATATGTTCTAAAGAATATAATACTAAACGAATATTAACGGAACATGTTTTAACAAAACATAGCGATggatttataaatcaaaatgcAATCTGTGATGTATGTGGAAGAAATTGTAAATCAACGCGTCTTTTGAATAGACATAAAAAGacTCACATTGCAAGAGAAAGAATCTATAAATGTGATGTATGTGATAAATCATATATGGATTCGTCGCATTTAGCAAATCATAGAAAAACGCACACTACCGAAAAGCCCCATAAATGCCTTCAATGTGAAAGAACTTTTCGCaccaaacaattattaaatcttCACACGGAAGCTATTCACgaagaaaagaaatatttatgtcAATTTTGTTCGAGAGTATTCGGTACACAAAGGACATTATCcgaacatattttaaaaaaacacaccGAAGGGTTTCAAAGATTTGTGATTTGTTCAGAATGTGGTAAAAAGTGTGAATCTGTAGCTCATCTTAAAAGACATACGCGAATTCATACTGGAGAAAGACCTTATAAGTGTGAAGTTTGTGAAAAAGCATTCAGAACAATATCTTGTTTTATAAGTCATAAAAGAATACACACTGGAGAAAAGCCATTTGTCTGTCCACATTGTAATAAAGCTTTTTGTGTTTCACAAGGTTTAAAGGCACATTTAAGAACTCATACTGGTGAAAGGCCATTTGAATGTCCAGTATGTAATAAGGCCTTCGGCCAGAAAAATACGTTGAAGACACATATGAAAATTCATTAG
- Protein Sequence
- MESFKKYEQLQIDEICRLCLTKTEQMILISESGVTDMLLECASIQVSEEDGIYLVCSHCTNEISRWYVFKQQIMNSFEIGQWLINQRNQKMKENDFKCDEEVNDADNKTNSGDILLNESETSRVQMQSMNDINDTNRLVDDHFDENQKELIKCEHCGKEYKTSSALYKHVSSHNEKLYECSKCDKVFKQAQTLADHIRRHYDSRNHACDICGKKFYKQFNVTEHMRIHTGERPFNCNHCEKTFTRALLLRNHIKKTHTGEKQYICEVCSKSFVDGYQLKIHMRTHTGEKPFSCNQCRKTFAMQGQLKSHMKYKHTREKDFICNVCARAFTAKHTLEEHIRIHTGIKKEPRHKCNICNKKCITTTQLKTHIRSAHTGERPFNCDMCEKCFFTKTALESHIKTHTGEKSFVCCDCGKAFSAKSSLKIHERIHTGEKPYKCNINSENAFICNSCASDVRRWYEFKKQVLRSLEIGRWVLKQRNEKLKILPASETPMIKSDDSEQNQFPVENVIVKMEQNDENLNLIDTQNGISCVKAENEDLSDEEPSCSSGSISRGNYACDTCGRVCKSTRLLNRHKKIHTNRERRFKCDICFKAYFNLSHLQYHKLTHEEVRPFQCDKCEKSFLTKALLQIHIESAHEGIKHICKICSKEYNTKRILTEHVLTKHSDGFINQNAICDVCGRNCKSTRLLNRHKKTHIARERIYKCDVCDKSYMDSSHLANHRKTHTTEKPHKCLQCERTFRTKQLLNLHTEAIHEEKKYLCQFCSRVFGTQRTLSEHILKKHTEGFQRFVICSECGKKCESVAHLKRHTRIHTGERPYKCEVCEKAFRTISCFISHKRIHTGEKPFVCPHCNKAFCVSQGLKAHLRTHTGERPFECPVCNKAFGQKNTLKTHMKIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -