Mser013431.1
Basic Information
- Insect
- Malthinus seriepunctatus
- Gene Symbol
- -
- Assembly
- GCA_963924605.1
- Location
- OZ004602.1:9857748-9859112[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00012 0.019 15.2 0.0 2 38 15 51 14 57 0.93 2 3 9.8 1.5e+03 -0.6 0.0 12 38 166 192 158 197 0.72 3 3 0.083 13 6.1 0.0 12 38 218 244 208 249 0.91
Sequence Information
- Coding Sequence
- ATGTCACGGAAACGGAGAAAAGTTAAGAAGCAGCGTCCTTCTGATGAACAAATGAAAATTGCCGCAGCTTTAGTTATGGAAGAAAAGCGCAGTAATAGGAAAGTTGCAAAGGAATTAAATATTTCTCATAATACTTTAAGCAAATACATAAAAATGATCAAAGAGGGGAAGGAAGCGAATATGGGGTACAAGTTTCATAACAAAGTTTTAAACCCTGAGAATGAGAAGAAATTTTATGAAATGATAAGTAAATTGTCCGATAATTCTGACGGATTAACTCGAAAGGAAATACGTTGCCTAGTATACCAGTTTGCTGTcgaagaaaatttgaaatttccagAAAGGTGGAAAGTGACAAAAATGGCTGGAGAAGACTGGCTcgccagttttataaaaagccATCCGACATTGTCTATCAGAAAATCTAAAAAACCACCCACACAAGAAAAGAGAGAAGAGAATAACCTTTCTAAAGAAGAAATTGCCGCGGCTTTAATTATGAAAGATAACTGCAGTCTGGGAGAAGTGGCTAAGGAATTAAATATTTCCCATAATAATTTAAGCAGGTATATGAAAAGTATCCGAGAGGGAAAGGAGGTAGTTAAAAAGCAGCGTCCTTCTGATGAACAAATGAAAATTGGCGCGACTTTAGTTATGGAAGAAAAGTGCAGTAATAGAAAAGTGGCTAAGGAATTAAATGTTTCTCCTTCCACTATAAGCAGATACATACAAATGATCAAAGAGGGGAAGGAGGTGGTTATGGGGTACAAGTTCCAtaacaaagttttaaatccTGAGAATGAGAAGAgattttgtgaatatttaagtaaattttccGATAAGTCTGACGGATTAACTCGTAAAGAATTACGTTGCCTTGTGTATCAGTTTGTTGTCGAGGAAAACTTGAAGTGTCCAGAAAATTGGAAAGAGAAGAAAATGGCCGGAAAAGACTGGCTTGCTAGTTTTATAAAAAGCCAGCCGACATTGTCTCTCAGAAAACCGGTTGCCAAATATGCCGgaaaacatttacaaaaaaactacGTTTGTTACATTTGTGGAAAATGGCTAGCAACACAATCTAGTATAATAGCACATCTTAAAGTTCATAATGACGATAAACAATATATTTGTGCTAATTGTGGTAAAGCTTTTGTACGAAAACATCATTTAGTTAATCATGTGCGCACACATACTAAAGAAAAACCTTACAAATGCACGATTTGTAATAAATGTTACACTCAAAGTGGCACGTTAGCAATTCATATGAGAGACCACACTGGAGAAAAACCTTATAAATGTCACATTTGTGAAAAATCATTTGTTAGTAATACTCTGTTAAAATCTCACCTTGCAAGACATTAA
- Protein Sequence
- MSRKRRKVKKQRPSDEQMKIAAALVMEEKRSNRKVAKELNISHNTLSKYIKMIKEGKEANMGYKFHNKVLNPENEKKFYEMISKLSDNSDGLTRKEIRCLVYQFAVEENLKFPERWKVTKMAGEDWLASFIKSHPTLSIRKSKKPPTQEKREENNLSKEEIAAALIMKDNCSLGEVAKELNISHNNLSRYMKSIREGKEVVKKQRPSDEQMKIGATLVMEEKCSNRKVAKELNVSPSTISRYIQMIKEGKEVVMGYKFHNKVLNPENEKRFCEYLSKFSDKSDGLTRKELRCLVYQFVVEENLKCPENWKEKKMAGKDWLASFIKSQPTLSLRKPVAKYAGKHLQKNYVCYICGKWLATQSSIIAHLKVHNDDKQYICANCGKAFVRKHHLVNHVRTHTKEKPYKCTICNKCYTQSGTLAIHMRDHTGEKPYKCHICEKSFVSNTLLKSHLARH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00951310;
- 90% Identity
- iTF_00951310;
- 80% Identity
- iTF_00951310;