Basic Information

Insect: Malthinus seriepunctatus
Gene Symbol: PGBD1
Assembly: GCA_963924605.1
Location: OZ004600.1:21537437-21556382[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.4e-09 2.3e-07 30.9 0.1 1 44 13 56 13 57 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.4e-09	2.3e-07	30.9	0.1	1	44	13	56	13	57	0.94

Sequence Information

Coding Sequence: ATGGCGCCCGTACAAAAAAAAAAGGAACAGAAGTGGAAAGAAGAAAATATGGCAAAAGCAGTTGAAGCTGTTACCACTAAAAAAATGGGATATTTGAAAGCTGCAAAAATATTTCAAGCTCCCAGAACATCTTTATTTCGGTACTGCCAAAAAGGAGAAACCGTTAAAGCACAACTAGGACGTAAACCTACTTTACCAAAAAATCTTGAAGATAAGCTTGTTCAATATTTGCTTTTAATGGAAACTAAGTTCTTTGGACTCACAAGAACAGACGTTCGTTCAATTGCTTTTCAAATGGCCAAACGTAACAACATAAGTAATCCTTTCAATTTATTCTCTCAAACTGCAGGAAGGGACTGGCTGAGGCAATTTCTTCGACGGTATCCAATTTTGAGTATTCGAAAACCAAGTGGTACTTCTATGGCAAGAGCTGTTGGATTTAATAAAACACAATCAAAATGTGCTGAAGCTATTGCTTTAAGAGGAAAAAGGCAAATAGGTGCGTTGACGTCTGCAGAAAGAGGCAGTTTAGTTACGGCCATATTATGCATGAGTGCAGGTGGTACTTTTGTACCACCTATGCTGATATTCCCAAGAAAAAACGCTAACGAACAAATAAAGAAAGGCGCTCCTCCAGAAACGCAGTTTGCATTCCATCCTTCAGGATGGATTCAAACAAACATTTTCACACAATGGTTTCATCATTTTCTTGAAACAGTTCGGCCTACACAAAATGATCCAGTTCTTCTGATATTTGATGGACATTATTCACATACTAGAAACCTCGACGTCGTTTTGAAAGCAAGAGAGTCTCATGTCACGATTTTATGTTTACCGCCGCACAGTACCCACAAATTACAACCGTTGGACAAAACTGTAATGGGTTCCTTAAAACAGTTTTATAACGAAGAAATTCGTATTTTTTTACGGCAACATCAACGACCTGTAACACATTTTGATGTTTCAGAACTCTTTGGAAGAGGcAACAATACTAGTAATTGTGAAGCTGTTTCTGAAGAGGATGTATCACCATGTACTACAGCTTTTATTCTTTATCTAATGGATAATTATAGCGATGTGCAGTTTCTAATAAATCCACATATTGAATTTTGGAATGAGGCAATAAAGGTATTGGCAAGTGTTAAATATCATACACGTGGAAAAGATTACGTTCCACCTACAATTACGAACTGGGATAGCGAAACTTCTCTTTCTTCTCTTTCTTTTGAAGTACAAAGAGAAGAAAGAGATGAAGAAGAAAGAGAAGGAGAAGAAAGAGAAAAATTCGAACAAAAGCAGCGCAACATCAGAGAGAATATAAATGCGCGCTATCAAAATTGTAAGATGTCTCCCTATTACGAATACGATAGCGAAACTTCTCTTTCTTTTGAAGTACAAAGAGAAGAAAGAGATGAAGAAGAAAGAGAAGGAGAAGAAAGAGAAAAATTCGAACAAAAGCAGCGCAACATCAGAGAGAATATAAATGCGCGCTATCAAAATTATGAAAAtgatgcaaaagaaaattttgagaatattCTGGCTGCAGATTCGGACAATTGTAGCGAAATTGaaaccaattttgatgaaagGCGTATTTCGGAGCcggaaataattattgaagaaaGTGATTCGGAACAGTGGGAAAGCGATGACGATGTACCTTTGGCAAGGCTTGGACAAAGAAAAGTAtctcaaagAACAGCAGATCTCACAAACGACATTGCCGAGTTAGACACTCCCTACCAATTcttcaaatatttgtttaccGACGATATTTTCATGTACATCACTGAGCAGACAAATCTGTTTGCAGTGCAAACCAGACCTGAAAAGCCAGCCAATATAAATCCTGAGGAGATAAAGGCGTTTGTTGGAATATGCCTTTATATGTCAATCGTGCATCTACCAGCAACAAGAAGTTATTGGAAAACTAGTTTACAAATTCCAGCCGTTTCCCAAACAATGACTTGCAACCGATTTCTTCATTTCAACGACAACAGCGAACAGAAGCCATATGGTCAACCAGGGCacgataaaatttataaaattcgcCCCTTTTTACAACAACTGAGAGAGAGATTACTACTTGTACCAAAAGAAGAAATGATGGCTGTTGATGAACAGATAATACCGACAAAAGCGAGGTCTTCTCTGAAACAGTACAACCCCAAGAAGCCGCACAAATGGGGATATAAAGTTTTCGTTCTAAGTGGAGTATCTGGTTTCAGTTATGATTTCGATTTCTACACAGGAGCTTCCGGAGCTCCAAAGAACCATCCCGATTTTGGTGCCAGTAGTAATGTGGTAGCAAAACTAATCCAAACAGTGCCACAcgatgaaaattataaagtcttttttgacAACTGGTTTACTAGTGTGCCACTTTTAGTCTATATGGCTAAAATTGGTATTTTGCATCTAGGGACTGTTAGAATAAATCGACTCCCTAATTGTAATTTGCCAAAAGAATCCGAGATGAAAAAGAAAGGTAGAGGTTCTGTAGTTGAAAAACTAACCGATGTTGATGGTGTCACAATATCTGCTGTTTCCTGGTATGACAATAAAATTGTAACTACAGTGTCATCATATCTTGGAAGTCAAGCATTGTGTGAGGTAAGAAGATTTTGCAGGAAGGAGAGGTCTTATATCACTGTTCAACGACCCCATTCTATTGGAGTATACAATAGTTATATGGGAGGGGTAGATCTGTTAGATTCCATGCTGAGTTACTATCGAATCAAGATACGAACGAAAAAGTGGTATATGAGAATATTCTTTCATTTCATCGACATGACATGTGTAAATGCATGGATCCTCTATAGAAGGTCGATCGCCGCTGGAGAGCCATACCTACCACTGTGCGATTTCAAGTTGGCCATTTCTGAGGTTCTAACCAGGTCACACGTCACTTCAAGAAAAAGAGGAAGGCCGAGTACTTTGCAATCTCATTTAGAGGAGAAGAAAAAGAAGTATCCGTTTTCGGAGATTCCATCACAGGAAGTACGACAAGACGAGAAAAACCACATGCCACTATGGACCAACAAACGTCAACGTTGTAAATTTCCAGACTGCAAAGGAAAATCTCAAGTGTCTTGTGAAAAGTGTGTTGTGAATCTTTGTCTGAACCAAGACCGTAACTGCTTTTACAGATTCCATACGGAATGA
Protein Sequence: MAPVQKKKEQKWKEENMAKAVEAVTTKKMGYLKAAKIFQAPRTSLFRYCQKGETVKAQLGRKPTLPKNLEDKLVQYLLLMETKFFGLTRTDVRSIAFQMAKRNNISNPFNLFSQTAGRDWLRQFLRRYPILSIRKPSGTSMARAVGFNKTQSKCAEAIALRGKRQIGALTSAERGSLVTAILCMSAGGTFVPPMLIFPRKNANEQIKKGAPPETQFAFHPSGWIQTNIFTQWFHHFLETVRPTQNDPVLLIFDGHYSHTRNLDVVLKARESHVTILCLPPHSTHKLQPLDKTVMGSLKQFYNEEIRIFLRQHQRPVTHFDVSELFGRGNNTSNCEAVSEEDVSPCTTAFILYLMDNYSDVQFLINPHIEFWNEAIKVLASVKYHTRGKDYVPPTITNWDSETSLSSLSFEVQREERDEEEREGEEREKFEQKQRNIRENINARYQNCKMSPYYEYDSETSLSFEVQREERDEEEREGEEREKFEQKQRNIRENINARYQNYENDAKENFENILAADSDNCSEIETNFDERRISEPEIIIEESDSEQWESDDDVPLARLGQRKVSQRTADLTNDIAELDTPYQFFKYLFTDDIFMYITEQTNLFAVQTRPEKPANINPEEIKAFVGICLYMSIVHLPATRSYWKTSLQIPAVSQTMTCNRFLHFNDNSEQKPYGQPGHDKIYKIRPFLQQLRERLLLVPKEEMMAVDEQIIPTKARSSLKQYNPKKPHKWGYKVFVLSGVSGFSYDFDFYTGASGAPKNHPDFGASSNVVAKLIQTVPHDENYKVFFDNWFTSVPLLVYMAKIGILHLGTVRINRLPNCNLPKESEMKKKGRGSVVEKLTDVDGVTISAVSWYDNKIVTTVSSYLGSQALCEVRRFCRKERSYITVQRPHSIGVYNSYMGGVDLLDSMLSYYRIKIRTKKWYMRIFFHFIDMTCVNAWILYRRSIAAGEPYLPLCDFKLAISEVLTRSHVTSRKRGRPSTLQSHLEEKKKKYPFSEIPSQEVRQDEKNHMPLWTNKRQRCKFPDCKGKSQVSCEKCVVNLCLNQDRNCFYRFHTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -