Mser004157.1
Basic Information
- Insect
- Malthinus seriepunctatus
- Gene Symbol
- bab2
- Assembly
- GCA_963924605.1
- Location
- OZ004600.1:60647396-60655233[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8 9.1e+02 0.2 0.0 16 29 180 193 177 196 0.84 2 2 2.9e-15 4.5e-13 49.1 0.0 2 42 366 407 365 410 0.94
Sequence Information
- Coding Sequence
- ATGACGATGCAGCAATATTGTTTACGATGGAACAACCATCAACCGAATTTTATTTCGGTGTTTTCTAGTCTTTTAAATAACGAATCGTTAGTTGATGTTACGTTAGCAGCCGAAGGCAGACATTTACAAGCTCACAAAGTAGTTTTGTCTGCATGTAGTTCATATTTTCAGtcaCTATTTACTATAAATCCGTGTCAACATCCGATTGTCATCTTAaaagatgtaaaatttttagatcTTAAAGTTATGGTAGATTTTATGTATTATGGAGAAGTTAATGTATCGCAAGATCAGTTAcctcatattttaaaaactgcagaaatgttaaaaattaaagGCTTAGCTGAAATTCCTGTAGAACAATCTGCTTTAACCAAATCACAAAGTAGTTCAACAGAAAGAGCAGAATTATTAACCCCGGGCGATTCTAATTGGAGTACAGAAGAAATTCCAAAACATTCGTTATCATCCTCACCTTGTCCATTATCGCCTTCTAGTAAAAGGAAAAGGTTGAGGAAGTCTTCGACCGGTTCAGGGTCAGGATCGACGGAACGAGCATCTGAAGAACATAATATATCAAGTGAAGTTGCCACAATGACACCTACTTTAGGAAGTAATCTTGGAACTGTGATAAAACCCGATCCGGGTAGTTATATTTCTGACTGTAGTAATCCTCCTCGTAAACAGCATAGTACTGATTCAGAGCTTCATCGTGGAAGTTCACACGAAAGTGTCGAACAAGAAACCACGCATCAAATCACATTGcAAATTCCACAGCACGATACGTCTCACAAACTTGAGTCGACAATCGATATGACAGGAGCTTCTTCCATTTCTCAAACAACTGCTACAGGATACCAATGGGGAATTGTTGATGGATCGTATCCACGTTTCACTCTTTCAACATGTCAGTCGAATATCGCCACAACAGCAGACTTAAATTACACAACTTCAACTTTATCTCAAACTTCGATAGATAATATGACAACGACTGTTAGTGATCCCACAGCGAATGTAGTCAATCATAATCACATGCCGACATCGCCGACGCATATGAACattcaaaaaagaaaacgaAGTATTAATCCTCAATCCGACGAAAATTTTGTACGTGCATTAGAAGCTGTTCGATTTGGTGGTATTGGATTTTGTAAAGCCGCCAAAATGTACGGTGTTAATAACCGTACCCTTTGGTTAGAATATAAAAAACGAGGTTATCCTAATAATAGAATAAGTATTAAAAACCGAAAACAAGAATTTGTTAATCCAGGAAACATGAATCAAAATCCAACGAGTCCCATTCCTACTACATCAAACGAACAAGACGAAGATGTTATAAGTGCTAGTATAAATCATCCAGCAACTGCCATAATTAGTGGTAGCTACTTAGATACCCGTCACGTCGATCTTTCGCCTATGTTACCAAGACCTAGGTATTTGGATCCGGTCAGTGTTAATGTTAATACTCAACATACTCTTGTTACAGAAAGAACCGTAGTAACGAGTCAAACGCAAGTGTTGCAAGCTGCACAAACTTCTCAACTGCCGAGTCATATGGGTACAAAACGCGGTCGTTTTTTAATGAGACAACCTCGTATTAAACGCGAAAGTGATCAAATTCAAAACCCCGACGGAGATCCGTTATCTATTCATTACCTTTCTGTACCACCGTTGAGAATAGAACGCCAGTGTTCGGATCCTTTGCCGACAGTATCGCCGCCTCCTGGAAATTTGCTCACCGTACCTGGTGGAAGCCACTTAGTTAAACAACATTCTCATCCTTTACTATTACCGAGCGAAATGCATCAgcaaTTACATACTTCGCAATCGAGTCCAATTCACATACACGTGGTTACAAATACCTCGACTTCTTTACAGAGCGAAGGTGATAGATCGGCTAGTCCAGTTGTAGTTGTTTCTGATCCATTTGGAACTTCCCAAGAAGTAGTTTTAGGGTGCGAACGGATGAGTTGA
- Protein Sequence
- MTMQQYCLRWNNHQPNFISVFSSLLNNESLVDVTLAAEGRHLQAHKVVLSACSSYFQSLFTINPCQHPIVILKDVKFLDLKVMVDFMYYGEVNVSQDQLPHILKTAEMLKIKGLAEIPVEQSALTKSQSSSTERAELLTPGDSNWSTEEIPKHSLSSSPCPLSPSSKRKRLRKSSTGSGSGSTERASEEHNISSEVATMTPTLGSNLGTVIKPDPGSYISDCSNPPRKQHSTDSELHRGSSHESVEQETTHQITLQIPQHDTSHKLESTIDMTGASSISQTTATGYQWGIVDGSYPRFTLSTCQSNIATTADLNYTTSTLSQTSIDNMTTTVSDPTANVVNHNHMPTSPTHMNIQKRKRSINPQSDENFVRALEAVRFGGIGFCKAAKMYGVNNRTLWLEYKKRGYPNNRISIKNRKQEFVNPGNMNQNPTSPIPTTSNEQDEDVISASINHPATAIISGSYLDTRHVDLSPMLPRPRYLDPVSVNVNTQHTLVTERTVVTSQTQVLQAAQTSQLPSHMGTKRGRFLMRQPRIKRESDQIQNPDGDPLSIHYLSVPPLRIERQCSDPLPTVSPPPGNLLTVPGGSHLVKQHSHPLLLPSEMHQQLHTSQSSPIHIHVVTNTSTSLQSEGDRSASPVVVVSDPFGTSQEVVLGCERMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00951042; iTF_00950011; iTF_00949729;
- 90% Identity
- iTF_00951042; iTF_00950011; iTF_00949729;
- 80% Identity
- iTF_00951042;