Mser005014.1
Basic Information
- Insect
- Malthinus seriepunctatus
- Gene Symbol
- bab2
- Assembly
- GCA_963924605.1
- Location
- OZ004600.1:69489392-69507317[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.5e-11 5.5e-09 36.1 0.0 1 39 372 411 372 415 0.90 2 4 3.1e-12 4.9e-10 39.4 0.1 1 39 426 464 426 468 0.95 3 4 1.4e-16 2.3e-14 53.3 0.0 1 45 481 526 481 526 0.97 4 4 1.5e-15 2.3e-13 50.1 0.0 1 39 533 572 533 577 0.91
Sequence Information
- Coding Sequence
- ATGGCTGGGCAACATTACTGCTTAAGATGGAATAATTACCAAAGTAATATGACTTCTGTTTTTCATCAATTACTTCAAAACGAAGACTTCGTAGACGTGACTTTAGCGTGCAAAGATTTATCGTTGAAAGCTCACAAGGTGGTACTGTCTGCATGTTCttcttattttcaaaaacttctaTTAGAAAATCCGTGCAAGCACCCAACAATAATTATGCCTCAGGACGTATGTTATGATGATCTTAAGTTTATCATTGAATTTGTATACAAAGGAGAAATCGACGTTTCTCAAGCAGAGCTACAGtCTCTGTTAAAAACTGCAGAtcagttaaaaataaaaggGCTGTGCGAATCAGAAGAGAAAGAAAACTCTTCGTCACTTTTTATACCTAAGtcaaactcaaaaatttatagGATATCTTCTCCGAAACATTACAAGAAgttgaatattaataataaaagacaTAGATTTAGAGAATTTGAAGAAGAATTAATAAATGAAGAAACTGGTCAGGATGATTTAGGTCAAACAAATACATCAGATGACGATAGTGATACACCTTTAGTTGTGGATGAAGCACCAAAACGAAAGAAATTGTTAACTCAAAATCAGTCTACACCAATTAACATGAGCAGTCATGGCCTTATGACTGGACAGGCTTTATTTTCTCAATTGTGTGAGAATGACGACTTTCCACCAGAGCCTCCAGCTCCATCAGCAACACCAGTGGGAGATGTTGACCTTCGAGATCACTCACCAACCCGTAATTTATTTCAAGCAACACATAGAACAGATTTGTCAGATGTTCACATTAAATACgaagatattaaaaaagaaacaactatCAAATTCGAAACGTTACGATCTTACGATCACGATTCGATGATGGACATGGATACGTCACATTTGTCCGGCCCTGAACATTCTATGGAAAGTCACGAAGACGCAAAAAGAAATTTGCATTCTATGATGGTCACTCCCGAATTAATGGGAATGCTACCGGGGGTGTCTGGAGGAAGATTAGAAGGTTTGAAAGATGAGAATGGTCAATCAAAAACAAACGGTCACACGGATAATTTAATAAGGTCACACGGCGGAGGACCGAAAACTTGGACGCAAGAAGATATGGAATTAGCATTAGACGCTTTAAGAAATCATAACATGAGCCTTACAAAAGCGTCCGCAACATACGGTATTCCATCTACCACTTTATGGCAAAGAGCGCATCGATTAGGAATTGATACACCAAAGAAAGAAGGGCCGACGAAATCGTGGAcggaagaaaatttaaattccgcGCTTGAAGCGCTAAGAACTGGAACAATATCCGCAAATAAAGCTAGTAAAGCATATGgtATACCTAGTAGTACGTTATATAAAATAGCTAGAAGAGAAGGTATAAAGTTAGCGGCACCTTTCAATGCTGCACCTACGACGTGGTCTCCCGATGACTTAGAAAAAGCTTTAGAGTCTATTCGATCCGGTCAATCGTCTGTTCAAAAAGCATCGACCGAGTTTGGTATTCCTACAGGAACGTTGTACGGGAGATGTAAAAGGGAAGGGATAGAACTATCACGTTCGAATCCTACACCTTGGTCGGAAGATGCCATGGGTGAAGCTCTAGAAGCTGTTAGATTAGGCCATATGTCGATCAATCAAGCCGCAATACATTATAATCTTCCGTATTCTTCTTTGTACGGTCGATTTAAAAGGGGTGTAAAATACGAAACAGAAGCAATTGATTCTAATAATTCAGATAGTCAGTCTCAGCCGGATTCTCAAGTGCTCGTAATGGATTACCCTAATTCTCATCAGCAGATTCAATACCAACATCATGCGAACAGCTGA
- Protein Sequence
- MAGQHYCLRWNNYQSNMTSVFHQLLQNEDFVDVTLACKDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYDDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCESEEKENSSSLFIPKSNSKIYRISSPKHYKKLNINNKRHRFREFEEELINEETGQDDLGQTNTSDDDSDTPLVVDEAPKRKKLLTQNQSTPINMSSHGLMTGQALFSQLCENDDFPPEPPAPSATPVGDVDLRDHSPTRNLFQATHRTDLSDVHIKYEDIKKETTIKFETLRSYDHDSMMDMDTSHLSGPEHSMESHEDAKRNLHSMMVTPELMGMLPGVSGGRLEGLKDENGQSKTNGHTDNLIRSHGGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIKLAAPFNAAPTTWSPDDLEKALESIRSGQSSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGVKYETEAIDSNNSDSQSQPDSQVLVMDYPNSHQQIQYQHHANS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00003877;
- 90% Identity
- iTF_00951048; iTF_00950015; iTF_00949725;
- 80% Identity
- iTF_00951048;