Mser008819.1
Basic Information
- Insect
- Malthinus seriepunctatus
- Gene Symbol
- retn
- Assembly
- GCA_963924605.1
- Location
- OZ004600.1:127522875-127532057[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-20 1.3e-16 61.2 0.0 16 89 12 83 6 83 0.93 2 2 2.9 6.7e+03 -2.0 0.0 21 36 218 233 180 240 0.54
Sequence Information
- Coding Sequence
- ATGGCTGTAGATAGATCTGCATTTTTACCGATTTATGGCACACCGATAAATCGATTACCCATCATGGCCAAGTCTGTTTTGGATTTGTACGAGCTATATAATTTAGTAATTGCTAGAGGTGGATTGGTAGATGTAATAAATAAGAAGCTTTGGCAAGAAATAATCAAAGGCCTCCATTTACCTTCATCTATTACTTCTGCTGCATTTACATTACGCACACaATATATGAAATACCTATATCCGTACGAATGTGCCAAAAGGCATCTCTCCACACCTTCGGAATTGCAAGCGGCCATCGACGGTAATCGTAGAGAAGGTCGTCGTAGTAGTTACGGTCAGTACGATCAAAGATCTCCAAATGGGCCTCCGGGTCCAGCCATATCGCCTCACCAATTAGCGTCCCATCAACAATTGGCGGCTCGCATAAATTCAGTTATGAGCGGAGCGGCAGGTTTACAAAACGGAGCTCTTCATCCGAGTCACCAATCGCCGATGGGCACACCATTAAACGGTTGTCCGGTTCCCGGACTCTCGACGGGAGAACTCGAAGCGAGGATGTTAGAATAcatgaaattaataaacaaagaaatGAGAAATAACGGACTTGCTGGAACTTTACAAGATAATTCCAGTCTACCGGTCGAATTAACgccaaatttgagccaaatagACTTATCTCGTCTCACATTATGGAACATATACAACAATAACCAGTTACATCACGAGCCACAAAAGGAAGCTCTAAATCTCAATCTTTCTGAAACTCACATTCCATCACCTCATTCAATTAAACGTGAACCAGATTCCGAACTAAGTCCGCCTTCCAAAAAGACAAGAGATGAAGAACAAGCGAAAAATTCACCTCCCAGTAGTGCACATTTTAAAATCGACAGTAGAGGGGACTCTCGCAATGGAGACAATTCTATGGTCGTCAGTATGGAATTTAACGGCGTCACATATCAGGGGGTGCTTTTTCCACAAACGTCAACCAACGGAAGACCAGGAATAGCGTCTTAA
- Protein Sequence
- MAVDRSAFLPIYGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECAKRHLSTPSELQAAIDGNRREGRRSSYGQYDQRSPNGPPGPAISPHQLASHQQLAARINSVMSGAAGLQNGALHPSHQSPMGTPLNGCPVPGLSTGELEARMLEYMKLINKEMRNNGLAGTLQDNSSLPVELTPNLSQIDLSRLTLWNIYNNNQLHHEPQKEALNLNLSETHIPSPHSIKREPDSELSPPSKKTRDEEQAKNSPPSSAHFKIDSRGDSRNGDNSMVVSMEFNGVTYQGVLFPQTSTNGRPGIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00949583;
- 90% Identity
- iTF_00949583;
- 80% Identity
- -