Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963924605.1
Location
OZ004600.1:104184866-104191028[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-26 4.5e-23 81.9 0.2 1 89 296 381 296 381 0.94
2 2 9.1 2.1e+04 -3.5 0.0 8 39 837 870 835 879 0.71

Sequence Information

Coding Sequence
atgcAAGGAGACGATCCCCCATATCTTCCCGTAGGTACTGCCGTCAGTGCTAAATATAAAGGAGCTTTCTGCGAAGCTAAAGTTTCAAAAGTTGTTCATGTTGTCAAGTGCAAAGTAACGTATAAAATGGGCTTAGGAACCGCTACCATCAGTGACGAACATGTAAAAGGAGTTTTACGTGTTGGACAATTAGTTCAAGCTAAACATATGGAAAAGAAAGAGTATGTAGATGCCACTATTAGTAAAATACAAGATTGCAGTCAATATACAGTTGtttttgacgATGGAGATATAACAACTCTAAGAAGAACTGCCCTTTGTTTGAAAAGTGGGAGACATTTCAATGAAAGTGAAACGTTGGATCAACTACCTCTTACCCATCCAGAACATTTTGGTAACCCTGTTGTTGGTGGTCGACGAGGAAGAAGAAGTAGGCAAGCAAAggaAGATAGTAGTGAAGGAGAAGCTGAAGAAGAAAATGAACCAGATCTGGAAGTTTATACTATGGAAGTAGGCCGAGTTGTGTGTGTTGAAGCTAGCGACAAAAAGAGAAGTAAAGATAACTGGTTTCCAGGGCTGGTTGTTATGCCTTCAGCTCAACCTACAGTTCGTATTAATGTGAAAGATGAATTCCTAGTGAGATCATTCAAAGATGGACGAtaTTATACTGTACCTCAGAAAGAAGTTACTGAATTCAGCCGGGATATGGTTGCCAAATGTGAGAGCACTTTAGCCGAAGCAGTTGAAAAAGCGGTAAGGTATTTGGATAGTGACGAGCTTCCTGTTCATTGGGAACGtgctttattatttaacaacTTGATACAAGTTGCGACATCAGAATCTGATGATCGTTGTACTGATAGTTCAGAAGATGAAACTCCAGAAGAAAAAGATCATTTTGTAGCACAACTCTACAAATTTATGGATGATAGTAATACTCCACTGAATAAAAGTCCTATGATTGGAAATAAAGATGTCGATCTTCATAGATTGTTTAGAGTAGTTCGAAAGTTAGGTGGTTATAACAGAGtcacgaataaaaataaatggcgTTCTGTTACTCTAAGGCTCAAGCTAACAAATAATCCTAGTAACCATAATCAAGTTAAGTTagtttataagaaatttttattaagcttTGAGGCGTTCCATCGTACTTTGGGAGTAACTATGCTCAGTCATCCAAGAAACGCTAAAAAGAGTCGAGGACGAAGTTTGATTCGTGACAAAGACCGAAGTACTCCGGTCAATAGCCCTAAACCAGAAAAAGAAGAAGACATCTTTGTAGAGAAAAAGGAAGAAGAAAAGGTtgaagaaaaaccaaaaattgttaaaaaaccTGAAGTGAAAcctaaagaagaagaaaaaatcaaaCCAAAAGAAGTAAATGAAATTAGTGACACCAACAGCAGTGATACGCCAGATTTTTCAGAATTACCATCAACTTCTACTGCTAAACCAAAACGAACAGAAACTAAAACTAGTAGAGAACGTAAAGTTAAACCACCCACAGGAGAAAAAGTTAAAGCAATGGTTGAGAAATTAGAAGAACAAGTTAAAatcgaagaaaaagaagaagataaagTAATTCAGCAAACAAGATCGAAGAGTCAAATTccaaaagtaaaagaaaaagaacAACCCCCTGAGAAAAAGGTGAGAGACACTAAAACGCCGCTTCCTGAAATTCCTTCTGTTAGTAAAATTACACCAacaaaagtaatcaaaaaaCCTGAAGATGAAAAGAAAAGAGGGCGTAAACGATTCAATgcagaagaaaaagaaaaaacttccaATTCAGATGGTAGTACTACAGATTCGTCTTCCGCTGTACCTGCGGTCAATATTGGAGATAAACTTAAAGTGTATTATGGACCTACACATGAATCAAAAGTCACTTATGAAgctaaaattatagaaattgacaAAGAAGGAACTGCAAATCCTATGTACTTGGTTCATTATACTGGATGGAATACACGTTATGATGAATGGATAATGCCAGCACGTATCGCCGAAAACCTAAGTGCCACAACCAaagccaaaaaattaaaacaaagtaCAACTACAAATAAGGCAGCTACTATGAAATCGATGAGTAAAAGAGGACGCAGAATGTCGATAACCGGCAGGAGTACAATTCAAGACACTCCACGGTCTACAACGCCTTCTTCTGTTACTTCCACTTCAAGTAGAACGAAAAGCCCTGGTACACCAGTTACCAGGGCGTTTCGTTCAACTCGTCAGGGTGAAGTTAATAGAAGAATGCGTCGTGCATCTGCTCAAACTGACATGTCAATACATTCTGAATCAGATTCGATGGGAACTGAAAGTGATTCAGAAGTTATTAAAACAAGAAGTGGTGTAAAATCAGAAGATGGAAATGAACCTACcactaaaaagaaattaaaacattCTTCAAGGGATAAGCGTGTCTTAAAAGATGATGACGAAACTGAAAAAGAAGACGAAGTAGGTACAGTTGAAATTAAACCCAAGCGTACAAGAAAACTTCGCAAGGTCATAGAGTCCAAATCCACTGAAAGTGATGAAGACAGTGGCAGTCCTCCAAAAGGACGTGATTTTGATTTGATTCAAATACGATCAGAGTTAAAAGGATTCGTTAAAGCAGCTAATCTCGCTAATGCAAATTCATCCGAAAAAGACGCCGTTTCTTCGGATGAATCAAATAATACTTCAGATAATAAACTGGTTTCTTCTGAAACAGAAGAAACTAATATGAAGAGTACAATTTCAAAATCATTAAGCTCTGAAgatatttatgaatttaaagAACCAGAACCATTTGAATTTGAAACTAGAACAAAGTTGGTAGATGAGAAAAAGAAACGATTGGTGCCAAGAATTTTTGAAGATGTTGAGAAAATacctaaaaagaaaaaatctgTTAGTCCTACTAAAGCTGAGACTAAGGAAGAACAGGATACTGATAGAAAACGTATAAAACAGGTACCGGTAAAGAAACCGGAACCTTTAGATGATGATGAAACAAGCAATGACTCTATAAGCAGGCTACAGGTTGAAGATCCATTTGATAAATTAGTAGAATCGCCTTCTTTCCTTAGTGGTAAGGAAAAACCTCTCGGTTTTGGAGAACATAAATCCAAAGTAGTTAAAGCACTAAATTTAGATGAACCTTTAAGTTTATTTCATGACCTGTCAGAAACAGCAGAAGATGATAGTGGAGATCATCTCGACATTTCAGATACTGAAGAGTCACAAAATGAGCCTTTATTCACACATAAAGAACAGTTATTTTCAGAGTCTACATTTAGTAAAGCTATCCCCGACCGGCCAAGCTTAGATCCCATCTTTAGAGGTtttgttccaaaaatggatagaAAACAGAAAGATAGTGATGATGATGACTGCATTCGAGCTTCAATACAAAGTGTTATTAACCAGTCCTCTTCAACTGATGATGATAGCAATGATCTTTTATCTGTAAATttaccattttcaaattttcccgATAAATTGGAAAAGCCAAAAACACCAACTATAATATTGAGCAATATTGATTctgaagaaaatataaaaatttcagaaCAAGATACACAAAAGCCTGATGAAAAAgataaagaaacaaatttgcCTTTAAAAGACATATCTCCAGCTTTGCAAGAAACTGATAGTACATTACTTGAATCAATATGTACACAAAgcgaaatattaacaaaattagaTGATGCtaaagaaattaatattaaaaccgGAACAAAAATCGCTGACTCGTTGCTACAAAAGTTAAGTATGATTGAAAGTATAGTGGAGAAAGTTGCGACCGAAGCTTCAGATAGCGAAGAAGACGACAAACCGATCATCGCCATTAAAGCCGAAATAAAGCAAGAATCGATTGCAATGCTGAAAGAGGAACCAAAAGTAAAATTGGAAGTTCCGATAAAACTTCAAGAAACAAAATTAGAAACTAAACCAAAAATAGaaagtaaaataaaaccaaaacttCTGGAAACAAAATATAAAGCAGTCGAAAATAAAAAGCCTGttgaaacaaaaacaaaaccTGAAGCACCCATTCCTGAAGTTAAAAAACGCGCTCGTAAAATTGTGAGCCGTGAATTTATAGAAGAGACTGATTCAGATTCTGACAGTACTGATTCTGATGAGCGTTTAGTAATAGCGCGATCGGATGAAGAATCTCAAACTAACTCATCTTTTGATATTAAATTGGATTCAAAAGAAGCGACTAGTGAACCAGTAAACGTTGAAAATGTTCAAGCTTCCTCAGACTCCAGTTTTAAATTTAGTACCATCAAAAAGGATGTTGAACCAAAAGTGGTAAAACCTGAAGTAGACGCAAATAAGGAAGAAGAGCCCGATTCTCATTTACACTCTCTTCTATTGTGTGAAGAAACAATTCCTGGAAGCCCTGCACCGGCACCTGAAGGTCCATTAGTAACAGAAACTAAAACAAAGACCAAATCAATTTTAGAAATGCCGTTTGCTAGTGCACCTGGTACAAGCAATAAAGTAGAATTGGCTAGAGAAAGTAAATGTGTGCCTAAAGAACGAGTGCGTCCTCTTCCGCTGGCTTTGCCATTAGATAATAGAGAAAAAGATGTTCAAGAAGCATCTACCGTGTTAGACAACACTCCTCCTATGACACCTGAAAGCACAATTAGCAACTTATCACCTCGAGGtgATTTATCACCAAATACAGCAGATGACAGTTGTAAATCGGGAGAAGGAGATGGTGATTATGGAATGCAACGAAGAGgttcttcaaataaaatatcataCAGTGAAGATGGAAGTTTAGACAATTTACTTAATATTGATAGCAATacgtcaaataaaaaattattagacgGTGCCACAGCATCAACTTGCAGAAAAAGACGTAAATCGTGCAAAACAACTGATGAAGTTCCTACAAAACGTGGTAGAAAACCTCTAAATCGTTCGAGACACACAAGCGATAGTGATGATAATACATTCGATGTACCTGAGCAATCAATAATGTGCAATTCATCTTTGAATTCTGGTCCAAGTTTAGAAAGTCGATTAACGCGTTCTCCAAAACCTTCCaagtacaatttttatattgaattagATCCAAGTTTGGATAGTGCTCAACGAATAGCAGTATTGCAACAAAAGTTGCAAGATATAAGAAAGACTTATGCTGATGTTAAAGCAGAATTGGCAGCTGTTGAaaggagaagaaaaaaattaagaagacGAGAAAGAGAAGcCAAAATGTCCGCCAAACAAGAATCCGTAGCTACTTGA
Protein Sequence
MQGDDPPYLPVGTAVSAKYKGAFCEAKVSKVVHVVKCKVTYKMGLGTATISDEHVKGVLRVGQLVQAKHMEKKEYVDATISKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRSRQAKEDSSEGEAEEENEPDLEVYTMEVGRVVCVEASDKKRSKDNWFPGLVVMPSAQPTVRINVKDEFLVRSFKDGRYYTVPQKEVTEFSRDMVAKCESTLAEAVEKAVRYLDSDELPVHWERALLFNNLIQVATSESDDRCTDSSEDETPEEKDHFVAQLYKFMDDSNTPLNKSPMIGNKDVDLHRLFRVVRKLGGYNRVTNKNKWRSVTLRLKLTNNPSNHNQVKLVYKKFLLSFEAFHRTLGVTMLSHPRNAKKSRGRSLIRDKDRSTPVNSPKPEKEEDIFVEKKEEEKVEEKPKIVKKPEVKPKEEEKIKPKEVNEISDTNSSDTPDFSELPSTSTAKPKRTETKTSRERKVKPPTGEKVKAMVEKLEEQVKIEEKEEDKVIQQTRSKSQIPKVKEKEQPPEKKVRDTKTPLPEIPSVSKITPTKVIKKPEDEKKRGRKRFNAEEKEKTSNSDGSTTDSSSAVPAVNIGDKLKVYYGPTHESKVTYEAKIIEIDKEGTANPMYLVHYTGWNTRYDEWIMPARIAENLSATTKAKKLKQSTTTNKAATMKSMSKRGRRMSITGRSTIQDTPRSTTPSSVTSTSSRTKSPGTPVTRAFRSTRQGEVNRRMRRASAQTDMSIHSESDSMGTESDSEVIKTRSGVKSEDGNEPTTKKKLKHSSRDKRVLKDDDETEKEDEVGTVEIKPKRTRKLRKVIESKSTESDEDSGSPPKGRDFDLIQIRSELKGFVKAANLANANSSEKDAVSSDESNNTSDNKLVSSETEETNMKSTISKSLSSEDIYEFKEPEPFEFETRTKLVDEKKKRLVPRIFEDVEKIPKKKKSVSPTKAETKEEQDTDRKRIKQVPVKKPEPLDDDETSNDSISRLQVEDPFDKLVESPSFLSGKEKPLGFGEHKSKVVKALNLDEPLSLFHDLSETAEDDSGDHLDISDTEESQNEPLFTHKEQLFSESTFSKAIPDRPSLDPIFRGFVPKMDRKQKDSDDDDCIRASIQSVINQSSSTDDDSNDLLSVNLPFSNFPDKLEKPKTPTIILSNIDSEENIKISEQDTQKPDEKDKETNLPLKDISPALQETDSTLLESICTQSEILTKLDDAKEINIKTGTKIADSLLQKLSMIESIVEKVATEASDSEEDDKPIIAIKAEIKQESIAMLKEEPKVKLEVPIKLQETKLETKPKIESKIKPKLLETKYKAVENKKPVETKTKPEAPIPEVKKRARKIVSREFIEETDSDSDSTDSDERLVIARSDEESQTNSSFDIKLDSKEATSEPVNVENVQASSDSSFKFSTIKKDVEPKVVKPEVDANKEEEPDSHLHSLLLCEETIPGSPAPAPEGPLVTETKTKTKSILEMPFASAPGTSNKVELARESKCVPKERVRPLPLALPLDNREKDVQEASTVLDNTPPMTPESTISNLSPRGDLSPNTADDSCKSGEGDGDYGMQRRGSSNKISYSEDGSLDNLLNIDSNTSNKKLLDGATASTCRKRRKSCKTTDEVPTKRGRKPLNRSRHTSDSDDNTFDVPEQSIMCNSSLNSGPSLESRLTRSPKPSKYNFYIELDPSLDSAQRIAVLQQKLQDIRKTYADVKAELAAVERRRKKLRRREREAKMSAKQESVAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00949577;
90% Identity
iTF_00949577;
80% Identity
-