Basic Information

Gene Symbol
Gata5
Assembly
GCA_950108345.1
Location
OX467285.1:18396416-18402216[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-17 4.9e-14 51.8 2.4 1 35 329 362 329 363 0.97
2 2 5.3e-19 1.4e-15 56.8 6.2 1 35 385 418 385 419 0.98

Sequence Information

Coding Sequence
ATGGACGAACAACCCAAAGTGACAATTTACAACAGCATGAAAATTAAGTCGGAAGACAATCGTGGAACGAGTCCAACCGAACAGGAGCAAAATATGTCTGTTATAATTAGAAGGCAAGTTATCACAACAGCTGGTACAATTGAACAACCAACGGAAGAACCAAAAATCGAACAAGTTGTAGCTGAAGAAATCGTAAAGACGTCGGCATCGACGCCTCTATCTGGTAGTCCACAAGCACCTTCGTCTGTTGCTTCTCAAGAGCTTCAACAGTACGAAGAATCTACAACGCAGCCAGAAGTTCAATATGAAGTTGAACAACAACACTTTTCAGATCAAAACGTTGTTTCATCAGAACAATATCCAGTGACCACACAAGAATACACACAAGAGCAGCCAATCGAATATACCACCACTGTAGAAGCCGGGAGTATACCAGGTGGAGTTCCTCACATACAAATCGAAGGTGTACAGTTTACAGAATCGCCAGAAGATGTCAAAGTAGGAGTCGAATATACAAATTTAGATTCGGTCGCATCTGCTGCACAATACCAAACGGCTCATTTTGCCAATGATGGAACTCAATACCTGCATCCGCAGCAGTaccaacaatttcaaaactttaatattGCGCGAGGATCAGACGATAGTCCACCGAACTCGGTACTGTACAAAAATGATCCAAATTTGGGCTCGTCTAGAATTTATCAGagttacgaaattcaaaattcacaAGCGTCAAACAATCAAGTGACTTTAATAGGACATAGTGGAAATAGTTACCAATATTCCGTGTCGACGAATCCGTCGTGGACGCCAACAAGTGTAAATTCGTCCGAATATTCAACTTATCCTTCGACCAGCTCTATAAATTTACATCCGGGCTCGGAAAATATTGCTTACCAAAATTTTCCTGGAAATGCTGCTACGTGGGCTCAGTTGGAAGACGGGTACGAGGCACCAATGCAAGATGTCGATATAAAAGAGTGTGTTAATTGTGGTGCAAGTATTACACCGTTGTGGCGAAGAGATGGCACGGGACATTATTTATGTAATGCTTGTGGATTGTATAACAGAATAAATGGAGTTAATCGACCTCCTGTTCGTACTACGAAGAAGCCTCCTACgAATGGAAATCGCAGGAGTGGTGTATTGTGCGCAAACTGTCGAACCACCACAACAACTTTATGGCGAAGAAATAATCAAGGAGAGCCCGTGTGTAACGCTTGCggattatattttaaattacacggggTTAATAGACCACTAACTATGAAAAAAGAAGGCATACAAACACGTAAAAGAAAACCAAAAAGTGGGGGCCCAATGTCATCGGGCGCGGGATTAGGAATTCCACAAAGAGCCATGATGATCCATAATACTATGTACCAAAATAGTATACCGGGAGAATTAGCAGCACCAACCGATCAATATCAATTTCCACTTAGTATTAGTCAAACTAATCCCACCATTAGATTGCCAAGTGCTGATCACCTTAATCGTCAAACCATATCTAATTTGCCACCTTTAGAACCTGTGATGATACCACGCACTGTCGACGAACAAGCAACTGTTATAACTTCAACATCTGCAGCAAATGACTTACAAAGAGCATAA
Protein Sequence
MDEQPKVTIYNSMKIKSEDNRGTSPTEQEQNMSVIIRRQVITTAGTIEQPTEEPKIEQVVAEEIVKTSASTPLSGSPQAPSSVASQELQQYEESTTQPEVQYEVEQQHFSDQNVVSSEQYPVTTQEYTQEQPIEYTTTVEAGSIPGGVPHIQIEGVQFTESPEDVKVGVEYTNLDSVASAAQYQTAHFANDGTQYLHPQQYQQFQNFNIARGSDDSPPNSVLYKNDPNLGSSRIYQSYEIQNSQASNNQVTLIGHSGNSYQYSVSTNPSWTPTSVNSSEYSTYPSTSSINLHPGSENIAYQNFPGNAATWAQLEDGYEAPMQDVDIKECVNCGASITPLWRRDGTGHYLCNACGLYNRINGVNRPPVRTTKKPPTNGNRRSGVLCANCRTTTTTLWRRNNQGEPVCNACGLYFKLHGVNRPLTMKKEGIQTRKRKPKSGGPMSSGAGLGIPQRAMMIHNTMYQNSIPGELAAPTDQYQFPLSISQTNPTIRLPSADHLNRQTISNLPPLEPVMIPRTVDEQATVITSTSAANDLQRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00951456;
90% Identity
iTF_00951456;
80% Identity
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