Basic Information

Gene Symbol
gata4_1
Assembly
GCA_950108345.1
Location
OX467285.1:18414214-18446809[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.9e-18 1.5e-14 53.5 2.7 1 34 306 338 306 340 0.97
2 2 2.9e-18 7.4e-15 54.4 6.0 1 35 360 393 360 394 0.98

Sequence Information

Coding Sequence
ATGCACATGGTTATCATTAACATAACAGTTATGAAACGTGTCGATGGATACGTCGAGGAGGTTTCTCAGTACAGTCCCGCCTCTAGACACGAAGGGGCAGACCTTTCCCCCCATTCGAGAGCCACCACGCCTCTGGAATGTCTTCCGTACACTACAGACGCACAGCAGGACAATTACCCTCCGGCGATGCGCGCCGATGGAGAGTATGTACTCTTCAATCACCGGATCGACGAGGTACACTTAGAAGAACAGGGAGCTCAATATTTACAATTAGATTCGGTACAAGGTGTTAATTCACATTCGCCAAACGGTAGCAGTACGTCGAGTCCTGGATCGCCGAGAAGAGTAGCCTTCACACATCTAAATTCAATACCACCGAGTGAACAACAAGAAAATCTCGCTAGTCCTCAATTGACGCAGTTATCCAATCACATTTATTCCGGCACGATTGACTGCGCCACTTCGGGAAATATATCAAGTCCGTTGTATTCGTCACCCGTTGGTACTTACTCGAGCGGTGCCATGCCTTACTACAGCACCGGTTCTCCCGAAATGGTTCCTCAACCATCGCCCCAATTGTGGACCAATTCTGGGGTGAACACATCGGCAGGAATTCCTATTTCGGACGATTATCCAAAAGTTTCGTCATCGGGTTCGATGCTTCCTGGTTTTAGTAGACTTTCGACATTCCACTCTAGAACAGCAAATCATAGAACTTCACCTTACGTCGTACCTTCGAGAGCGGTCTATTCGGATTGGCAATATTCAGATCCACAGAGTGCCTTGCAGTACAACCTAATGTCTTCTCACAATAACAATCGGAATAGGCCACCAGCTGTTGGAGGATTATCGGCGGCAGCTTCATTATCTGCAATAGATCCTCGATCGGCTGAATATTTTACCGAGGGAAGAGAATGCGTTAATTGTGGTGCTATCGATACACCTCTCTGGAGACGTGATGGTACGGGACATTACCTCTGCAACGCTTGCGGTCTCTACCACAAGATGAATGGCATGAATAGACCACTCGTTAAACAGCCTCGTAGATTGTCTGCCTCACGTCGTGTTGGATTAACCTGCACTAATTGCCATACCAGTACCACATCATTATGGAGAAGAAATACTCTGGGGGAACCCGTATGTAACGCTTGTGGACTGTATTACAAACTTCATGGTGTTAATAGGCCAATGGCCATGAAAAAAGATAGCATTCAGACTAGGAAACGTAAACCAAAAGGCATGAAAGATTCAAATACCAACAATAATGGTATGTCAAATTCGATGCCACTACCGCCGTCAAACATCAAATTAGAATTACCTAATATTAAGCAAGAACACGGTTCATTAGGAGATACTTACGGAGATATGCGGACTATCACATCTATGAGCCATTTACAACACACTTCGAGTCCGAACAGTTACGTTTATAACGGATTAGTAACTCAAAGATTATCCCCTTACGAGTCTTCGCAAACGTCGCCTCAATTGGGTACTGGTACTTATTATGATATTTTACAACACCCGAGCACTCCCAGCCCACCAACAACAACCCCTAGTCCAAATGCACCACACATTGTTGTTAATACGGCAAATTCGTCGAAATTAATGATGAACGGAGACCAACACGTAGATAGACCTTCGGTGGTGTCTTCGTTGTCTTCCTAG
Protein Sequence
MHMVIINITVMKRVDGYVEEVSQYSPASRHEGADLSPHSRATTPLECLPYTTDAQQDNYPPAMRADGEYVLFNHRIDEVHLEEQGAQYLQLDSVQGVNSHSPNGSSTSSPGSPRRVAFTHLNSIPPSEQQENLASPQLTQLSNHIYSGTIDCATSGNISSPLYSSPVGTYSSGAMPYYSTGSPEMVPQPSPQLWTNSGVNTSAGIPISDDYPKVSSSGSMLPGFSRLSTFHSRTANHRTSPYVVPSRAVYSDWQYSDPQSALQYNLMSSHNNNRNRPPAVGGLSAAASLSAIDPRSAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLTCTNCHTSTTSLWRRNTLGEPVCNACGLYYKLHGVNRPMAMKKDSIQTRKRKPKGMKDSNTNNNGMSNSMPLPPSNIKLELPNIKQEHGSLGDTYGDMRTITSMSHLQHTSSPNSYVYNGLVTQRLSPYESSQTSPQLGTGTYYDILQHPSTPSPPTTTPSPNAPHIVVNTANSSKLMMNGDQHVDRPSVVSSLSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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