Mfla013650.1
Basic Information
- Insect
- Malthinus flaveolus
- Gene Symbol
- -
- Assembly
- GCA_950108345.1
- Location
- OX467288.1:7826110-7830282[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 6.9 4.7e+02 1.8 0.0 3 23 251 272 250 272 0.89 2 16 0.00071 0.049 14.3 0.1 1 23 321 344 321 344 0.96 3 16 9.3 6.3e+02 1.4 0.1 2 20 351 369 350 370 0.91 4 16 5 3.4e+02 2.2 0.7 3 23 437 459 435 459 0.86 5 16 0.0006 0.041 14.5 4.6 1 23 462 485 462 485 0.96 6 16 0.05 3.4 8.5 4.3 2 23 492 514 491 514 0.95 7 16 0.02 1.4 9.7 4.1 1 21 632 652 632 653 0.95 8 16 0.00063 0.043 14.5 2.2 2 23 665 687 664 687 0.94 9 16 0.087 5.9 7.7 0.6 1 23 690 713 690 713 0.95 10 16 6.5 4.4e+02 1.9 1.1 5 23 721 739 715 739 0.86 11 16 0.15 9.9 7.0 0.2 1 23 743 766 743 766 0.96 12 16 0.39 27 5.7 0.1 2 23 773 795 772 795 0.94 13 16 0.14 9.6 7.1 0.4 2 23 804 826 803 826 0.95 14 16 0.081 5.5 7.8 0.1 3 23 833 854 832 854 0.91 15 16 2.1 1.4e+02 3.4 0.3 2 23 1039 1061 1038 1061 0.91 16 16 0.24 16 6.4 0.9 1 23 1074 1096 1074 1096 0.96
Sequence Information
- Coding Sequence
- ATGGATACGAAACTTTGTAGAATTTGTGGAAAGTTAAGCGAAAATTACGTGCATATATTTAAGATTGAAGGACTAAAAAATAAGATCGAAACATGTCTCCCAATTATCgtgTCTCCCCATTGTTTACTACCAGATACGATATGTTCAGAATGCTTGGAAAACGTAGACAATTTTTACAGcttcataaaaaattgtttgcaaAATATAATCGTTTTAGAGGCACAGTACGATATCATGGAATCGTGTTTAAAGACGAAACGAAAACACGAAAAAGGCTGTTTTGTagattttagtattttgaaaTACGATAAAAATGTGCAAACGGACGAAGACGATTTTTATCTTAACTCTAATACTGTGTTAGACTGTGCAGAGCTCGAAAAACTTACAAACGCTTTGAATAATGCCGATCAGATTTTAAACAGCATCACTAAACCCACGACTTCTAGTTTAGTAAATTACGACGAATCAGAAAACGAAGATGTCGAAGTTGAAAAGCGAGAAAACAATTGGGTGGAAGATATCGGAGAAAGAAGAGGCGTAAAACGACGTAGCGATACTATACAACCAAATccgactaaaatttttaaaatggatagTTGTAATAAACGTAAAAACAGGCGACCCATGAAAGTGGCAGCGAGTCTTACATTTAATAACTTAGAAGAAATTTATAGTCATAGTTCAACGTTTAACGATTACTTAAaggaaaataaagaaactAGTGAAGCCATTATATTACCACAAATTTGCTTAATATGTGAAGCTCAGCTGTCTAGTCCTGTGGCGCTTGCAGCGCACGTTTATGAAATACACGGAATCGATATGGCACAAATTACTTCTTCCGAACCCGTAATGGAacgtaagaaaaaaattcctaatttaGTCAAAATTGCAGACCTCAAAACAAAAGattGTACAAGAGAGACGTTTGAGGAACCTCCCACCCTTCAGCCAACATTTGTGTGTCCAATTTGTCCCGCAGTTTTAACGAATCGAAACGATCTTTTCGTTCATTTGAAGAATAAACATTCGAAGCAAGCGTCTTTGATGTGTGGACTTTGTTTATTCGTCTCAGATTCGTactctaatctttcaaatcaTGTAACTGCTTGTAAGCAACAACATCctataatttaccaaaatatttgtaaaatttgttccTACAACGACgacagtttaaaaataatcgaaaatcaTGTTGCTGTACACGATTTCATATTGGATTTCTGCAAGAAACAATTACGAATGTTTGATCCGTGCGATTACATCGAATTCAATCCAAATTCGGatatgaaattgttaaattgcaACGAATGCGAGGTTGGCGGTTTTACGACATTTAAAGAGTTTAGCACTCATCGACGTAGTCAGCACCAAAGATTTCATTGtgatttatgtaataaattttacggtAGAAACTCGCACTTATGGAAACACGTAAATCGATTACATAAAGGCCATCCCAGTATTACTTGTTTATTGTGCCATAAAACGAGCGCTTCGAAGTACCACTTGTCTCaacactttaacaaaattcattGCACTAAACCTCCTAAATCCAAGCAAAGCGAAAATCACACCACCAACTTTATGCAACAAAAATTTCGTGGCTTCGACTTCCAGTCTGTACGTCAAAGTTTCTTAAAACAAGAATTATTACAACGAGAAGAACTGAAGGTGAGCACCGGAAGCGACGACGGCAATTCTGACATGGACGACGTTGCCAATGTCGACGATGTTGTCAACGCCGACGACGTGGATTTTTCTGAAAGTAACACCAACGATGTGGACGAAACGCAAACGAAATCGCCGCCCAAAGAAATAGATTCGTCGAGTAACTTATATACTaatattataacaaattatacTCCGCCACAAAACGAAGGGACTTTTAAGTGTCCGACGTGTTTCAAAGGGTTTCACAAGAAAATGCTATtgaaaaaacacaaaaagaaTTGTAGACCTCGTCTACAAAAAGATTTGTTGACACGTTGTAAGACTTGTTcgagaatttttaaagatcGGCAAAGCTTGACAAAACATCTGATTAATTATCATTCTGAGTATATTTGCGAAATTTGCGGACAAAAAGTACAAAGCAAATGTGAGATCGTATCTCACATACGCTTTTTACATCCTAACTGTCGTTTGTTTTGCGACTGCGGTAATATTTTACGTAGCCAAGTTGATTTGTTCGAACACAATCGCGATCACAGAAATTCCTTTGTTTGCCAATTTTGTGGAGACATGTTACcgactaaaattaaactaaagaTGCACATTTTAAGTCTGCACAGAAAAATTCTTAGTTTAAGTTGTGGTATTTGTCTCAAGTTATTCGAAACACAATACATTTTACGTGATCACGTTCGTTTAGTTCACAAAGACGAACTTTCGCCTATGACGTCTTGCGTTATATGTGGTAAGAATTACGGTTCCAAGTGGAAGACTTACGACCACATCAATAAATCGCACGGACGCATATTCAAAGCTTGCAAAAtttgtttggaaattttcGATACCGAAGAACAATTGACGGTTCATTTCGAAAATACGCACATTAATTCTAGTCAAAGTAAAGTTTCTGTTCAAGTTAAAAAAGATACTTTAGAAAGCGAAGGCGAGTTGAACGATAAAATGTCATCTAGCGAACTGTCGAATGATGCTATGAACAATTTTGGACCGTTAGAACAGACATTAAGCGAAAGCGAGCGCTCAAAAATAGATTCTGAAATTTTAGCGCGTGAAACTAAGATTTCTTTGTTGGAGAAACGTTTGCTCGGCGTGAAAAAGTCCACTGTTGATCAAGAAACTTATACCCCATCGGAAAAGCCGAAGAAGGAACAACCGGTCATTCTTAAGccTCCAAAAGTTGAATTGCATGAGCCTTCTTCGTCCAAGCTCACAAAGAGTAAGAAAACAAAGTCTCACGAGTTGGATCTGGAGATCGAACAGAACTACAATCAAAATCCTTTGCAAAACAGCTCTAAAcgtactgtctatgtaaatagTAACGATCCGTCTCTATGTGAAATTTGTCTAAAAACGTGGCCCGCTAAAAAACATCTATGGCAACATTATATTAGGTGTCATAAAACAGTCGCTGCAACAGTTTGTGGAATTTGCCTAAAAACTAACGTTAGTTACAAGTCGCTGCAAACTCATCTACTAGAAAACCACCCCAATTTACTTCACGGTCGAGGATTTGGCTCAAACTTCATATGCAGAATTTGTGGTCGTTACCATAATGCTAGCTCTAAACTCAAGCTACATATGGCAATACACGAAAACTTCGATTGGAGCATCTTGGAAAATTGTTCCGACTTAGAAAAAGCCAAAGGACCCACCACTAATGGATATCTTAGCAGCGAAAAACACATAAACTTCGAAAGTTTAATCGAACAAGTTGAATGTTCGTCAAACTCTGACGATTCCGACGCCGAAGTTAAAGAAGAAGGAGCAAACACTTCGTCGGATGACGAAAGCAATAACGAATCTGATTCGGAAGACTCTTTAGAACCGCCCACACTCGATCATTTTAAtcctacagaaaatttacaaaaagaaactgaaagttttattaaacaagaaattaaaattgagtaTTCTAGTTCCGAGAGTAGTTCGGAGACTAATCAAAGCGTATCGGACTCTGAAGGAGAAGCGGAACCGTACGAATTTTCGGTACGAGCTAAAAGCAGCTCTGAAGATAGTTcgaactttattaaaaacgaaaattgtgTAATCGAGAATGGATTAGAGAATGTAAACATGTTTTTAAGAAAACCCGAAGAATTGGATTTTGCCATACGCTCTATAAGCTACGAAGAAGCTGTAGACGTAGACGAACAAATTCGTGACGATATTTGTGAAATTCAATCTCATAGTCTAAATCCGCACGAGCTGCAGTCGGCCGTCGATAgtatattgtaa
- Protein Sequence
- MDTKLCRICGKLSENYVHIFKIEGLKNKIETCLPIIVSPHCLLPDTICSECLENVDNFYSFIKNCLQNIIVLEAQYDIMESCLKTKRKHEKGCFVDFSILKYDKNVQTDEDDFYLNSNTVLDCAELEKLTNALNNADQILNSITKPTTSSLVNYDESENEDVEVEKRENNWVEDIGERRGVKRRSDTIQPNPTKIFKMDSCNKRKNRRPMKVAASLTFNNLEEIYSHSSTFNDYLKENKETSEAIILPQICLICEAQLSSPVALAAHVYEIHGIDMAQITSSEPVMERKKKIPNLVKIADLKTKDCTRETFEEPPTLQPTFVCPICPAVLTNRNDLFVHLKNKHSKQASLMCGLCLFVSDSYSNLSNHVTACKQQHPIIYQNICKICSYNDDSLKIIENHVAVHDFILDFCKKQLRMFDPCDYIEFNPNSDMKLLNCNECEVGGFTTFKEFSTHRRSQHQRFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCLLCHKTSASKYHLSQHFNKIHCTKPPKSKQSENHTTNFMQQKFRGFDFQSVRQSFLKQELLQREELKVSTGSDDGNSDMDDVANVDDVVNADDVDFSESNTNDVDETQTKSPPKEIDSSSNLYTNIITNYTPPQNEGTFKCPTCFKGFHKKMLLKKHKKNCRPRLQKDLLTRCKTCSRIFKDRQSLTKHLINYHSEYICEICGQKVQSKCEIVSHIRFLHPNCRLFCDCGNILRSQVDLFEHNRDHRNSFVCQFCGDMLPTKIKLKMHILSLHRKILSLSCGICLKLFETQYILRDHVRLVHKDELSPMTSCVICGKNYGSKWKTYDHINKSHGRIFKACKICLEIFDTEEQLTVHFENTHINSSQSKVSVQVKKDTLESEGELNDKMSSSELSNDAMNNFGPLEQTLSESERSKIDSEILARETKISLLEKRLLGVKKSTVDQETYTPSEKPKKEQPVILKPPKVELHEPSSSKLTKSKKTKSHELDLEIEQNYNQNPLQNSSKRTVYVNSNDPSLCEICLKTWPAKKHLWQHYIRCHKTVAATVCGICLKTNVSYKSLQTHLLENHPNLLHGRGFGSNFICRICGRYHNASSKLKLHMAIHENFDWSILENCSDLEKAKGPTTNGYLSSEKHINFESLIEQVECSSNSDDSDAEVKEEGANTSSDDESNNESDSEDSLEPPTLDHFNPTENLQKETESFIKQEIKIEYSSSESSSETNQSVSDSEGEAEPYEFSVRAKSSSEDSSNFIKNENCVIENGLENVNMFLRKPEELDFAIRSISYEEAVDVDEQIRDDICEIQSHSLNPHELQSAVDSIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00951405;
- 90% Identity
- -
- 80% Identity
- -