Basic Information

Insect: Malthinus flaveolus
Gene Symbol: -
Assembly: GCA_950108345.1
Location: OX467285.1:8524693-8547804[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.12 8.4 7.3 4.2 1 23 220 242 220 242 0.97

2 20 0.014 0.96 10.2 0.5 1 23 248 270 248 270 0.96

3 20 3.3e-05 0.0023 18.5 0.8 1 23 279 302 279 302 0.96

4 20 0.0081 0.55 11.0 5.4 1 23 308 331 308 331 0.95

5 20 0.017 1.1 10.0 2.7 1 23 337 359 337 359 0.96

6 20 0.0002 0.014 16.0 1.1 1 23 365 387 365 387 0.98

7 20 0.058 3.9 8.3 4.8 1 21 533 553 533 561 0.97

8 20 0.15 10 7.0 6.0 1 23 565 587 565 587 0.97

9 20 0.015 0.99 10.2 1.9 1 23 593 615 593 615 0.98

10 20 0.0052 0.35 11.6 1.1 1 23 621 644 621 644 0.97

11 20 0.0037 0.25 12.1 2.6 1 23 839 861 839 861 0.98

12 20 0.004 0.27 12.0 1.0 1 23 867 889 867 889 0.96

13 20 0.018 1.2 9.9 2.2 2 23 896 917 895 917 0.96

14 20 0.042 2.9 8.7 3.1 1 23 923 945 923 945 0.95

15 20 1.9e-06 0.00013 22.4 0.5 2 23 952 974 951 974 0.94

16 20 0.32 22 6.0 1.5 1 23 980 1003 980 1003 0.97

17 20 0.31 21 6.0 3.0 1 23 1009 1031 1009 1031 0.97

18 20 0.0027 0.18 12.5 1.9 1 23 1037 1059 1037 1059 0.99

19 20 0.038 2.6 8.9 0.1 1 23 1065 1088 1065 1088 0.97

20 20 0.074 5 8.0 2.3 1 23 1094 1117 1094 1117 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.12	8.4	7.3	4.2	1	23	220	242	220	242	0.97
2	20	0.014	0.96	10.2	0.5	1	23	248	270	248	270	0.96
3	20	3.3e-05	0.0023	18.5	0.8	1	23	279	302	279	302	0.96
4	20	0.0081	0.55	11.0	5.4	1	23	308	331	308	331	0.95
5	20	0.017	1.1	10.0	2.7	1	23	337	359	337	359	0.96
6	20	0.0002	0.014	16.0	1.1	1	23	365	387	365	387	0.98
7	20	0.058	3.9	8.3	4.8	1	21	533	553	533	561	0.97
8	20	0.15	10	7.0	6.0	1	23	565	587	565	587	0.97
9	20	0.015	0.99	10.2	1.9	1	23	593	615	593	615	0.98
10	20	0.0052	0.35	11.6	1.1	1	23	621	644	621	644	0.97
11	20	0.0037	0.25	12.1	2.6	1	23	839	861	839	861	0.98
12	20	0.004	0.27	12.0	1.0	1	23	867	889	867	889	0.96
13	20	0.018	1.2	9.9	2.2	2	23	896	917	895	917	0.96
14	20	0.042	2.9	8.7	3.1	1	23	923	945	923	945	0.95
15	20	1.9e-06	0.00013	22.4	0.5	2	23	952	974	951	974	0.94
16	20	0.32	22	6.0	1.5	1	23	980	1003	980	1003	0.97
17	20	0.31	21	6.0	3.0	1	23	1009	1031	1009	1031	0.97
18	20	0.0027	0.18	12.5	1.9	1	23	1037	1059	1037	1059	0.99
19	20	0.038	2.6	8.9	0.1	1	23	1065	1088	1065	1088	0.97
20	20	0.074	5	8.0	2.3	1	23	1094	1117	1094	1117	0.96

Sequence Information

Coding Sequence: ATGGAGTTTCGACTCGATGTTATCGAACACGAACTATTACAACTTCAAAAGATCGAGTTAGTATGGTTTATAATAAGTAGAAAATTACCCGAAAGGCTACAAAATAACAGAGGGATCGTCGACTTCTTATTAGCAAACGAATCTAGATGTTGTTGTCGATGTTCAAATGGTCACGTTGTtccaataacattttattcttCAATAGCCGAAGGATATTGTCAGAATTTTATTGAAACTCAGTACGACAATAAAACACAAATGGGATTTCTAATCAATTCCGAATCTACAATTAACGAAAATAGTTGTACGTGGGCTACATCAACAAACGAGCCTGAAGTtcattgtaatttaaatgtaaatgcaACTGATGGAGCGAACGAATATAGTTATACACCACCTGCACCTACAAACGAGGCTACACCATTTGAACCTATTTTTATATCCACCGGTCCAACGAATAATgttcAAGATATTCAATTCGAAGAAGGAATTGTAGGAGAAGGTTCAAATTCAGAAACTACAAGTATTAAAATAGAGTATCCCGAATTAAATGAGGAGAAATGTGGAACATCGTTCGATGAATGTGattcttttattgaaaatggaCAGTTGAACAGTGTAGACGATGTGAAAACCATCTCTGATGAAAAAGAAATGTATCAGTGTGAAATGTGTAACTACAAAACGCATATAAAGAGATACCTAACTAAACATCAAGTATCTCATTCTGAAGAAAGGCCATATTCTTGCAATTCTTGTAGTTACAGAGCTAAATCAAGACGAAGTTTGAAGGCGCATATTGCTGGTCAtgCTCATACGAAAACACACGAGACATTCCAGTGTGAAATATGTGGAAGTGTCTTTAAAAACGTAGCTCATTTGAGAACTCACATTCTGCAATATCATACCAGTGACAAGCCATTTAAGTGTGATAGTTGTGATTATACGTGTGTTAGTAGACATTATTTAAAGCGACACAATCGAGCTGTCCATTTACTCGAAAAGAACTTCACTTGTGAATTTTGTGATTATAAGTCTTTCACTAAAAATAGACTTGCTATACATCGTAGAACTCATACAGGAGAGAAGCCTTTCGAATGCAGTCGATGCAATTACAAATCGACAGTTAAAGGTCAACTTATACTTCATATGCGAACTcatactggtgaaaagccaTTTGCTTGTCAGTTTTGCGGGTATAGAACTGCTTTTAAGCCAAACGTGCAAGATATTCAATTCGAAGAAGGAATTGTAGAAGaaagttcaaatttagaaacaaCAAGTATTAAAATAGAGTATCCCGAATTAAAAGAGGAGAAATGTGGCGCATCGCTCGAGGAATGTGATTCTCTTATTGAAAATGGACAGTTGAAAAATGTAGGTGATAAAAAAGCCACATCTGGTGAAAAGgtgCAAGATATTCAATTTGAAGAAGGAATTGTAGAAGAAAGTTCGAATTCAGAAAGTACAAGTATTAAAGTAGAGTATACCGAATTAGATGAGGAGAAATATGGAGCAACGCTAGATGAATGTGATCCTCTTATTGAAAATGTAGACGATACGAAACCCATatctggaaaaaaaattaaaaaaatacatcagTGTGAAATGTGTAGTTACAAAACGTCTACTAAAATGTGCCTAATTAAACATCAAcGACATAATCTCAGTGTTCATTTACGCGAGAAAAAATTCAGTTGTGAGTTTTGTGATCATAAATGTTTTTCAAGAACTTTGCTATCTGTGCATCGTAGGATTCATACTGGGGAGAAACCTTTTGAATGCACACAATGTAATTACAAATCGACACTTAAAACTATACTAAGAGTTCACATGCGAACTcatactggtgaaaagccaTTTTCATGTGACTTGTGTGAAtataaaactacttttaaGCCAAATGTAAAACGTCATATACAGCGCGTGCATTTTGGCGAAATGCCTTTTAGTTGTAAGATGTGTGATTTTAAAGtgGTCATCGACTTCTTATTAGCAAACGACTCTAGGTGTTACAACTGTTCAAATGGTCAGGTTGTTCCcataacattttattcttCAGAAAAAGCGGGAGAAGATAGTCagattttaattgaaactgaATATAATGCTAGAAAACCAACTCGTGTATGGATCAATCCAGAATCTACAAGTACCGACACTAGTTACGTATCGACTCCACTAAAAAACGAATCAAGTCTAtcagaatttaatttgaatttaactaCAACAGATAACGAATCCAGTTTTAATTCACCTGTACCAACAAATGAGGCTACAGACTCTAAAGTTAGTTTCCAACCAACTGATATAATCAAtgtACAAGATATTAATTCAGAAAAGGTAGTTGCAGAAGAGCATTCAGATTCGGAAACCGCAAGTATTAAAATAGAATATCCCGAATTAAATGATGAGACATTTGGCACATCCCTTGATGAATGTAAACCTCTTATTGAAAATGGACAATTAGAAAACACAGACAATAAAGAAGCCAAATATGGGTATATAGAAATATTTCAGTGTGAAATGTGTAGTTACAAAACAGATTATAAGAAGTACCTAACTAAACACCTGATCAGTCACTCTGAAGCAAGACCATTTGCttgtaaattatgtaattacaaAGCTAAAACCAAAGAACAATTGAAACTACATGTTGAAAGGCATagtggttttaaaaaactttcgtgTAATTTGTGCGATTTTAAATGTTCTTCAAAGTACGTTTTAAAAGGTCACATGGAAAGTCATACTCAAGAAGTTGAATTTAATTGTActttatgtgattataaaaCTTTCCAAAAACGGTTGTTTAAATCTCACATGGACCTGCATAATAAGACTGCATCATTACAGTGTGAAATATGTGGAAATGTCTTTAAagacaaaacaaatttaaaaaggcatATTTTACAATATCATGCCAAGGAAAAACCGTTTAAATGTGACAGTTGTGATTATACTTGTGTTggcgaaaatattttaaaccgACACAAACGAGTTCTTCATTTACACGAAACAAAGTACAATTGCGAATTTTGTGAGTATAAGTGTTTCGCAAAAACTGGACTAACTGAACATCGTAGAATTCATACTGGGGAAAAACCGTTCAAATGTAATCAGTGTAGTTATAAATCGGCGCTTAGAAGTCGGCTTAGAGTTCATATCCGAACTcatactggtgaaaaaccatttTCTTGTGAGTTTTGTGGGTATAGAGCTGCCTTCAAACCAAACGTAAAAGTTCATATCCTACGTGTGCATCCTAATGAAATGCCGTTCAGTTGTAAAATGtgtgattttaaaagtaaataccACATACCTCTAAAAAGGCACATTGAATCTGTCCACAAAAATCTACAAGAAAACTAA
Protein Sequence: MEFRLDVIEHELLQLQKIELVWFIISRKLPERLQNNRGIVDFLLANESRCCCRCSNGHVVPITFYSSIAEGYCQNFIETQYDNKTQMGFLINSESTINENSCTWATSTNEPEVHCNLNVNATDGANEYSYTPPAPTNEATPFEPIFISTGPTNNVQDIQFEEGIVGEGSNSETTSIKIEYPELNEEKCGTSFDECDSFIENGQLNSVDDVKTISDEKEMYQCEMCNYKTHIKRYLTKHQVSHSEERPYSCNSCSYRAKSRRSLKAHIAGHAHTKTHETFQCEICGSVFKNVAHLRTHILQYHTSDKPFKCDSCDYTCVSRHYLKRHNRAVHLLEKNFTCEFCDYKSFTKNRLAIHRRTHTGEKPFECSRCNYKSTVKGQLILHMRTHTGEKPFACQFCGYRTAFKPNVQDIQFEEGIVEESSNLETTSIKIEYPELKEEKCGASLEECDSLIENGQLKNVGDKKATSGEKVQDIQFEEGIVEESSNSESTSIKVEYTELDEEKYGATLDECDPLIENVDDTKPISGKKIKKIHQCEMCSYKTSTKMCLIKHQRHNLSVHLREKKFSCEFCDHKCFSRTLLSVHRRIHTGEKPFECTQCNYKSTLKTILRVHMRTHTGEKPFSCDLCEYKTTFKPNVKRHIQRVHFGEMPFSCKMCDFKVVIDFLLANDSRCYNCSNGQVVPITFYSSEKAGEDSQILIETEYNARKPTRVWINPESTSTDTSYVSTPLKNESSLSEFNLNLTTTDNESSFNSPVPTNEATDSKVSFQPTDIINVQDINSEKVVAEEHSDSETASIKIEYPELNDETFGTSLDECKPLIENGQLENTDNKEAKYGYIEIFQCEMCSYKTDYKKYLTKHLISHSEARPFACKLCNYKAKTKEQLKLHVERHSGFKKLSCNLCDFKCSSKYVLKGHMESHTQEVEFNCTLCDYKTFQKRLFKSHMDLHNKTASLQCEICGNVFKDKTNLKRHILQYHAKEKPFKCDSCDYTCVGENILNRHKRVLHLHETKYNCEFCEYKCFAKTGLTEHRRIHTGEKPFKCNQCSYKSALRSRLRVHIRTHTGEKPFSCEFCGYRAAFKPNVKVHILRVHPNEMPFSCKMCDFKSKYHIPLKRHIESVHKNLQEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -