Mfla015797.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malthinus flaveolus
Gene Symbol
-
Assembly
GCA_950108345.1
Location
OX467289.1:2716092-2728758[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.00076 0.052 14.2 4.6 1 23 627 649 627 649 0.99
2 15 0.00045 0.031 14.9 3.7 1 23 655 677 655 677 0.99
3 15 0.00063 0.043 14.5 3.8 1 23 683 705 683 705 0.99
4 15 0.0014 0.095 13.4 3.7 1 23 711 733 711 733 0.99
5 15 0.00017 0.012 16.3 2.7 1 23 739 761 739 761 0.99
6 15 0.0087 0.59 10.9 2.4 1 23 767 789 767 789 0.98
7 15 0.026 1.8 9.4 9.5 1 23 795 817 795 817 0.98
8 15 0.0023 0.16 12.7 1.3 1 23 823 845 823 845 0.98
9 15 0.0026 0.18 12.5 2.9 1 23 851 873 851 873 0.99
10 15 0.0017 0.11 13.1 2.2 1 23 879 901 879 901 0.99
11 15 0.01 0.68 10.7 2.2 1 23 907 929 907 929 0.98
12 15 0.00074 0.05 14.3 4.1 1 23 935 957 935 957 0.99
13 15 0.00083 0.057 14.1 0.8 1 23 963 985 963 985 0.98
14 15 0.0044 0.3 11.8 1.6 1 23 991 1013 991 1013 0.97
15 15 0.49 33 5.4 4.7 1 23 1052 1074 1052 1074 0.96

Sequence Information

Coding Sequence
ATGAAGACCATCCCTCTGATTGGTATTCTAGTGTGCGTTGTAGCAGCTGTGTCGGTTACCAAGGCCGCGTATATTCGGTCTGCGCGATCTCCGGTAAATAAACATCCAGACATAAGTAAATCTGCTACGACTTCTCAGTCTCCAGGGACGACCCAGTCTGCTCCGACTTCTCAGTCTCCAGAAACTAGCTCATCATCTACGATTTCTAGTCCTCGCAAGATTCGCCAGGCTGCTTCCACTTCTCAGTCTCCAGAAACAAGCCAGGCTGCTTCCACTACTCAGTCTCCAGGGACTACCCAGTCTGCTACGACTACTCAGTCTCCAGGGACAAGCCAGGCTGCTACAACTTCTAATTCTCGTAAGATTCGCCATGTTGCTTCCACTACTCAGTCTCCAGGGACTACCCAGTCTGCTACGACTACTCAGTCTCCAGGGACAAGCCAGGCTGCTTCCACTACTCAGTCTTCAGGGACTACCCAGTCTGCTACGACTACTCAGTCTCCAGGGACAAGCCAGGCTGCTACAACTTCTAATTCTCGTAAGATTCGCCAGGCTGCTTCCACTACTCAGTCTCCAGGGACTACCCAGTCTGCTACGACTACTCAGTCTCCAGGGACAAGCCAGGCTGCTACAACTTCTAATTCTCGTAAGATTCGCCATGTTGCTTCCACTACTCAGTCTCCAGGGACTACCCAGTCTGCTACGACTACTCAGTCTCCAGGGACAAGCCAGGCTGCTTCCACTACTCAGTCTTCAGGGACTACCCAGTCTGCTACGACTACTCAGTCTCCAGGGACAAGCCAGGCTGCTACAACTTCTAATTCTCGTAAGATTCGCCAGGCTGCTTCCACTACTCAGTCTCCAGGGACTACCCAGTCTGCTACGACTACTCAGTCTCCAGGGACAAGCCAGGCTGCTACAACTTCTAATTCTCGTAAGATTCGCCATGTTGCTTCCACTACTCAGTCTCCAGGGACTACCCAGTCTGCTACGACTACTCAGTCTCCAGGGACAAGCCAGGCTGCTACAACTTCTAATTCTCGTAAGATTCGCCAGGCTGCTTCCACTACTCTGTCTCCAGGGACTACCCAGTCTGCTACAACTACTCAGTCTCCAGGGACAAGCCAGTCTGCTACGAGTTCTAAGTCTCGCCTAATTCGCCAGGCTGCTTCCACTACTCAGTCTCCAGGGACTACCCAGTCTGCTACGACTACCCAGTCTCCAGAGACAAGCCAGTCTGCTACGAGTTCTAAGTTTCGCCTAATTCGCCAGGCTGCTTCCACTACTCAGTCTCCAGGGACTACCCAGTCTGCTACGACTACTCAGTCTCCAGGGACAAGCCAGGCTGCTACGATTTCTAATTCTCCCAAGATTCGCCAGGCCGCTTCCACTACTCAGTCTCCAGGGACTACCCAGTCTGCTACGACTACTCAGTCTCCAGGGACTACCCAGTCTGCTACGACTACTCAGTCTTCAGGGACAAGCCAGGCTGCTACGATTTCTAATTCTCCCAAGATTCGACAGGCTGCTTCCACTACTCTGCCTCCAGGGACTACTCAGTCTGCTACGACTACTCAGTCTCCAGGGACAAGCCAGGCTGCTACGATTTCTAATTCTCCCAAGATTCGCCAGGCCGCTTCCACTTCACAGTCTCCAGGGACTAGCCAGTCCGCTTCAACTTCTCAATCTCCAGGGACTAGCCAATCTGCTACGACTTCTAACCAGTTGGGTAGGATTGATCAGCACTCTGAGAATATTCAGCCTCTGAAGTCTGCATCGATCCAGCACGGAGGTCTAATTAAAACGGAAGAACAAGTAGGCAGTTGTATGAAGAAAGAAGTCGATTGTAAAGTGGTTCAAGATTCAAGTGAAAAGCCATTTCAATGTAATACTTGCGAATACCAATGTTCGGTGAAAGAAAGTTTGAAGACTCATATGAAGAGgcacacaggtgaaaagccTTACAAGTGTAGTATATGCCAGTATAGAAGTATCCATAAGATATCTTTGAAAAATCACATGATGAagcatacaggtgaaaaaccttataAGTGTAGTATATGCCAATATAGGAGCATACATAAGATATCTTTAAAAACACACATGATGAAACACACTGGTAAGACGCCGTTTAAGTGCGATACATGTGAATATAGTAGCATACATAAACTATCTTTAACGAAGCATATGATGAAacacaccggtgaaaaacCTTATCAATGCAACGTATGTCAATATGGAACAACACATAAGCTATCTTTAAAGAAACACATGATGATACACACAGGCGAAAAACCTCACAAATGTAGCCTATGCGAGTATAGAAGTATACAGAAGAAAGATGTAAAACAACATATGATGATACACACGGGAGAAAAGCCATATCATTGCAACTTATGCGATTACAAGACCACACATCAGCAATGCTTGAAGAAACACATAATGAAACATACTGGTGAGAAGCCTTTTAGTTGTAATATATGCGAGTACAAAACCGTGTACAAGTTGgctttaaaaaagcatttgaTGAAACATACAGGTGAGAAGCCTTATAAGTGCGATATGTGCGACTACAGAAGTATACAGAAAAAACATATAGACCAACACATGATGACGCACACGGGTGAGAAGCCCTATCAATGTACCTTATGCGAATACGGAAGCATACACAAGATATCTTTAAAAACACACATGATGaaacacacaggtgaaaaacccTATCAGTGTAAAATATGCGAATACAAAAGCATACACGAGTTGGCATTTAAAAAGCACATGATGTTACACACAGGCGAAAAACCttacaaatgtaatttttgcGATTACAGAAGCATACATAAGGCGTCCTTAAAGAAACACGTTATGAAGCACACAGGAGAAAAGCCTTATGAATGTTACCTATGCGAATACAAGAGCATACGTAAGGCGTCTTTAACCAACCACATGATCAAACACACTGGAGAGAATTCTTACGATTGCAACTTATGCGGATACAGAtgttttaatagaaatagCGTGAACGTTCACATGTTGATTCACACTGGTGATAAATCAGAGTGTAAGGAATTGGTTCGAGAACAAATAACGGATGGAAGTATAAAGAAAGAGTGTGAAGACTTTATTTTGAAGGACGACTTCTTAGTTAACAGGgagtttttttgttacaattgtgATTATAAATGCCTTAAGAAACGAAGCTTAATAAATCATATGCGCGGtcatagaaataaaaaatcgtttaagtGA
Protein Sequence
MKTIPLIGILVCVVAAVSVTKAAYIRSARSPVNKHPDISKSATTSQSPGTTQSAPTSQSPETSSSSTISSPRKIRQAASTSQSPETSQAASTTQSPGTTQSATTTQSPGTSQAATTSNSRKIRHVASTTQSPGTTQSATTTQSPGTSQAASTTQSSGTTQSATTTQSPGTSQAATTSNSRKIRQAASTTQSPGTTQSATTTQSPGTSQAATTSNSRKIRHVASTTQSPGTTQSATTTQSPGTSQAASTTQSSGTTQSATTTQSPGTSQAATTSNSRKIRQAASTTQSPGTTQSATTTQSPGTSQAATTSNSRKIRHVASTTQSPGTTQSATTTQSPGTSQAATTSNSRKIRQAASTTLSPGTTQSATTTQSPGTSQSATSSKSRLIRQAASTTQSPGTTQSATTTQSPETSQSATSSKFRLIRQAASTTQSPGTTQSATTTQSPGTSQAATISNSPKIRQAASTTQSPGTTQSATTTQSPGTTQSATTTQSSGTSQAATISNSPKIRQAASTTLPPGTTQSATTTQSPGTSQAATISNSPKIRQAASTSQSPGTSQSASTSQSPGTSQSATTSNQLGRIDQHSENIQPLKSASIQHGGLIKTEEQVGSCMKKEVDCKVVQDSSEKPFQCNTCEYQCSVKESLKTHMKRHTGEKPYKCSICQYRSIHKISLKNHMMKHTGEKPYKCSICQYRSIHKISLKTHMMKHTGKTPFKCDTCEYSSIHKLSLTKHMMKHTGEKPYQCNVCQYGTTHKLSLKKHMMIHTGEKPHKCSLCEYRSIQKKDVKQHMMIHTGEKPYHCNLCDYKTTHQQCLKKHIMKHTGEKPFSCNICEYKTVYKLALKKHLMKHTGEKPYKCDMCDYRSIQKKHIDQHMMTHTGEKPYQCTLCEYGSIHKISLKTHMMKHTGEKPYQCKICEYKSIHELAFKKHMMLHTGEKPYKCNFCDYRSIHKASLKKHVMKHTGEKPYECYLCEYKSIRKASLTNHMIKHTGENSYDCNLCGYRCFNRNSVNVHMLIHTGDKSECKELVREQITDGSIKKECEDFILKDDFLVNREFFCYNCDYKCLKKRSLINHMRGHRNKKSFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-