Basic Information

Insect: Malthinus flaveolus
Gene Symbol: -
Assembly: GCA_950108345.1
Location: OX467287.1:7243834-7249847[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.75 51 4.8 5.8 1 23 315 337 315 337 0.90

2 9 0.0005 0.034 14.8 3.7 1 23 343 365 343 365 0.98

3 9 0.0046 0.32 11.8 1.1 2 23 372 394 371 394 0.95

4 9 2.9e-05 0.0019 18.7 5.1 1 23 399 421 399 421 0.98

5 9 4.4e-05 0.003 18.1 1.5 1 23 430 452 430 452 0.99

6 9 2.9e-06 0.0002 21.8 0.7 1 23 457 479 457 479 0.97

7 9 2.2e-06 0.00015 22.2 2.1 1 23 485 507 485 507 0.98

8 9 8.9e-09 6e-07 29.7 2.2 1 23 513 535 513 535 0.99

9 9 2.2e-05 0.0015 19.1 2.1 1 23 541 563 541 563 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.75	51	4.8	5.8	1	23	315	337	315	337	0.90
2	9	0.0005	0.034	14.8	3.7	1	23	343	365	343	365	0.98
3	9	0.0046	0.32	11.8	1.1	2	23	372	394	371	394	0.95
4	9	2.9e-05	0.0019	18.7	5.1	1	23	399	421	399	421	0.98
5	9	4.4e-05	0.003	18.1	1.5	1	23	430	452	430	452	0.99
6	9	2.9e-06	0.0002	21.8	0.7	1	23	457	479	457	479	0.97
7	9	2.2e-06	0.00015	22.2	2.1	1	23	485	507	485	507	0.98
8	9	8.9e-09	6e-07	29.7	2.2	1	23	513	535	513	535	0.99
9	9	2.2e-05	0.0015	19.1	2.1	1	23	541	563	541	563	0.98

Sequence Information

Coding Sequence: ATGGCTagtgaaaatgaaattttgcaattatgCCGTTTGTGTTTAGTTAAAGAACAAGTGAATGTACCAATATTTGACGAACAAAGTGATATAagacaaattttcttaaaaatatctGCCTGTCTACCGGTCAAAgTTTCTAGAGAAGATAACTTaccaaaaaaaatatgtgacGATTgttcctacaaattagaaGTTGTGtatcaattttggaatacATCGGCAAGTTCAGAAAAGCAGTTAATAAAATGGTTAAATCAAATAGGTGCTGTTAATAGAACATCGGATAAGTCTTCAAACTCACATTCCTTATCGACCGATCCCATTGTAAACTTAAAACAAGAAGTAGTTGAACTTAACGATAATCAAGACCACGATAACTTAACTTCTGAAGACTTGGATCAATCTAACGAAAGTTACATTTTACAACAGCAGCAGCAGCTTCCTTATCAACAAGTCGATTTTCCATTTCAAGATGGGTTTGGGGATGATGATaCGCCGGCTAGTTCATCGGCAGTTATTAGCGAGACCGTTAGTAGCCGGCCGAAACGTAAGCGACGTGCTGCGGCAATGAAAGCACTTCCTCCTCAGTTAGATAGTGATGATGACGACGACGAAGATGATATGCTGGCAGGGAAAATTGCTAAGACTGAAGAACAGAGTGATGATAGTGGCGAAGATCCAGAaccaacaacttttgttggcTTACCTTCCACTAGTACAGATGACCAACCCGGACCTTCTGGTATTGGCAAGGGGAACTCGGAAGCACCATTCAAGAGATCGTTAAGTAAAGCTGTAAATAATCGGCGAGCGAAAAAAGTGAAACGAGGCACCCAACGAAACGAtccaactaaaaatataaataaattaaatagttgtaAAAATCCTTTCACAAGAACCAACTTGTCAAAGAATAAAGATATCCAGGATGACAAAATTTTCGAATGTTGGaagtgtaataaaaaatttgagcacttttttgaaatcaaagtGCATTGTGAGACTCATAAAAACAAGAGAACTTTCGAGTGTCAACTTTGTGGCAAAGTATTTCACAAAAAGCAGTTATTTCAATACCACCAAGCACGccattctaaaaattataaagttaaatgTGATAAATGTGAAAAGGGTTTTTACACCATGTTGGATTACAAAAGACACTACTCGGTTCGCCATAAGGGCGTGAGATTTGTTTGTAATCATTGTAATAAGTCATTTCTAgaccaaaataattataaacgaCACCTTAAAACTCACCAAAGTGGGTACGTTAAAGAAGAGTACAAGTGCAAGATATGCGATAAGATTTATCATGCGAAGGGTAGTTTGAACGTCCATTTGAAGATGCATAAAGACGTTTCGTACATTTGCGACGTATGTGGAAAATCGGTGACATCGAAAACTAGTTTAAATCATCACATTATGTTACATACTGGAGAGAAGCCATTTGTTTGTGAAGTTTGCGGGAAGtgttttaataagaaaatgttgCTGAGAATTCACACGAGAATCCACACAAACGTAAAACCTTACACTTGCACAATATGTGATAAAACTTTTAGTCAAAGGAGTACACTTACAGTTCATATGCGTTATCATACAGGAGATCGACCTTTTCGTTGCAATATTTGTGAAAAAGAGTTTGTTACGAAAACGTTTCTTAAAGTACACTCGAAAACCCACGGAACTGCTTTAGTagatgtttaa
Protein Sequence: MASENEILQLCRLCLVKEQVNVPIFDEQSDIRQIFLKISACLPVKVSREDNLPKKICDDCSYKLEVVYQFWNTSASSEKQLIKWLNQIGAVNRTSDKSSNSHSLSTDPIVNLKQEVVELNDNQDHDNLTSEDLDQSNESYILQQQQQLPYQQVDFPFQDGFGDDDTPASSSAVISETVSSRPKRKRRAAAMKALPPQLDSDDDDDEDDMLAGKIAKTEEQSDDSGEDPEPTTFVGLPSTSTDDQPGPSGIGKGNSEAPFKRSLSKAVNNRRAKKVKRGTQRNDPTKNINKLNSCKNPFTRTNLSKNKDIQDDKIFECWKCNKKFEHFFEIKVHCETHKNKRTFECQLCGKVFHKKQLFQYHQARHSKNYKVKCDKCEKGFYTMLDYKRHYSVRHKGVRFVCNHCNKSFLDQNNYKRHLKTHQSGYVKEEYKCKICDKIYHAKGSLNVHLKMHKDVSYICDVCGKSVTSKTSLNHHIMLHTGEKPFVCEVCGKCFNKKMLLRIHTRIHTNVKPYTCTICDKTFSQRSTLTVHMRYHTGDRPFRCNICEKEFVTKTFLKVHSKTHGTALVDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -