Basic Information

Insect: Malthinus flaveolus
Gene Symbol: Sall1
Assembly: GCA_950108345.1
Location: OX467286.1:17024203-17027404[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.8 1.9e+02 3.0 0.1 2 23 7 28 6 28 0.94

2 15 0.012 0.84 10.4 0.8 1 23 494 517 494 517 0.91

3 15 0.079 5.4 7.9 1.1 2 23 605 627 604 627 0.92

4 15 0.62 42 5.1 0.2 1 23 633 655 633 655 0.91

5 15 6.7e-05 0.0046 17.5 1.4 2 23 658 679 657 679 0.97

6 15 0.18 12 6.8 6.2 1 23 685 707 685 707 0.98

7 15 1.6e-05 0.0011 19.5 5.2 2 23 714 735 713 736 0.95

8 15 5.1 3.5e+02 2.2 0.8 5 23 749 767 748 767 0.95

9 15 5.4e-05 0.0036 17.9 1.3 3 23 774 795 773 795 0.97

10 15 0.13 8.7 7.2 0.0 2 23 811 831 810 831 0.96

11 15 4.6e-05 0.0031 18.1 1.1 1 20 837 856 837 859 0.94

12 15 0.00068 0.047 14.4 0.1 1 23 867 889 867 889 0.99

13 15 0.00088 0.06 14.0 3.7 1 23 895 917 895 917 0.98

14 15 3.8e-07 2.6e-05 24.6 2.2 1 23 923 945 923 945 0.98

15 15 0.0015 0.099 13.3 6.9 1 23 951 973 951 974 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.8	1.9e+02	3.0	0.1	2	23	7	28	6	28	0.94
2	15	0.012	0.84	10.4	0.8	1	23	494	517	494	517	0.91
3	15	0.079	5.4	7.9	1.1	2	23	605	627	604	627	0.92
4	15	0.62	42	5.1	0.2	1	23	633	655	633	655	0.91
5	15	6.7e-05	0.0046	17.5	1.4	2	23	658	679	657	679	0.97
6	15	0.18	12	6.8	6.2	1	23	685	707	685	707	0.98
7	15	1.6e-05	0.0011	19.5	5.2	2	23	714	735	713	736	0.95
8	15	5.1	3.5e+02	2.2	0.8	5	23	749	767	748	767	0.95
9	15	5.4e-05	0.0036	17.9	1.3	3	23	774	795	773	795	0.97
10	15	0.13	8.7	7.2	0.0	2	23	811	831	810	831	0.96
11	15	4.6e-05	0.0031	18.1	1.1	1	20	837	856	837	859	0.94
12	15	0.00068	0.047	14.4	0.1	1	23	867	889	867	889	0.99
13	15	0.00088	0.06	14.0	3.7	1	23	895	917	895	917	0.98
14	15	3.8e-07	2.6e-05	24.6	2.2	1	23	923	945	923	945	0.98
15	15	0.0015	0.099	13.3	6.9	1	23	951	973	951	974	0.96

Sequence Information

Coding Sequence: ATGGATTCGAATAACACGGTGTGCCCGGTGTGTACGCTGTTTCTGCGACCTGGAATTACTTTGACATCGCATTTATCGAGTCATCCGAAACAAAAAGTAATCGAAGCTCTCGTGACATTGGCTGCTAGTTCGAAAAATGACGTAAAAGATTTAGCCATAATAAACCCACCTGCCAACGAAGTTCCGAGCGTTCCAGTCGTAAATAATCCAGTATGGCCTCAACCAGTTAATGGCTTCACACAAATACCGACAAATCATTCGTTTATTTATCAGCAGTTTATGAGTACAACCAGTCAACCACCTACTACACCTGTTAACGTAAATCCTTTAAGTCAGCAATACGTATCGATTCCTACAGTGTTCAACCCACAGTTAATATGTCAGCCTTACATGTATCAACAACAACAATTTATAATGTCGGCTGGTTCGGCCGTCCATCCTTTACCATCACCTGGACGAAAACCGCAAATTATCGATTTATCCAGCGATTTGGAACCTGTGCAGTCGACAGAAATAACTTACGAACCCGAGAAAGAAGAAGTTAAGGATGATtctaaagaagaagaagaaactaTCGTCATCGACGACGAAGAGGCATCTAATAAAGTCGAAGAAGCGATCGAGTTGACGGAGGAATTAATGTTGGACAAGGACGAAAAAGATGAAGACGACATTCAGCTTAACGAAGATAAAGATCTGGAAGATTATGATGACGACTATGAGAACGTCAATTCGCCCACTTCTAGTGTCGAGTCAGATTATCTACGTGTTAGAACTGATTTAAATAAAGCGTGTCAAACCCAACAAATAGCACACATTGATATCGACGAAGATTCTGAAGCCGGTGAAATTATTACTCCCGATTTTTTCCATCTCACCACCGAGAGTGTGGTTGCCTCGAGTGTCGAACCGTCGCAAGCAGAAAAATCTGTCAAGTTTCAAGGCGAAAATGTAAACGTCGTTCAGCCTAAAGATCAAGTTATCGATATGGATGGTATGCAATTAGTGCTTTGCAGCGACTTTATGGGAAGCCAATTAATATCACAAGTCGAGGATTTTGAGTGTATAACGAACCGAAGTGAAAGGCCAATTTTGATGAACATCGGAGGAATGGACGGTGGTTCTAACGAATTTGAGCAATCGAACGTCAACTTAGATCAGTTGGCAGAAGAAAGCGTTTCTCGCGAAAGTACAAATATGAGCATTCGTGCCGACGAACATATGCCACCCAGGGGCGAACTATCGGGACAGgAAAGCAACGGAGCTGCAAGCGATGTAACATGGAGTAGAAGTCATTACGAAAGCAACTCGGCAACGTCGACTTCTTACGATTTGCTTGCACGTGAATCTTGGGAAGGTTCAGATTGTTCCGATTCAGAAGTACCTCCCCTTCAAAGTCGTATTCCTCCACGAACTGATTACAATCCCGATTTAGACGACACACCTACGATAGTAAGCATAACGGAACCACCTTTAAACTTCAAGTGTCCCATATGTGGAGAAGGTTTTAAGTGCCCTAAAGAACGTCGAGTACACCAAAGCGAAGTACATGATGAGAAAATGGACGAAAAACCTTCGCCTTGTaaagtaacaaataatataatcgGTTCTAGAATTAGTAAGAAACCCGTcaagaaattgcaaataaaGCCTAAAGCCACACCCGaaatcaaaaaagaaaataatttcgatAACGTCTTTACTAACATACTCAATGCCGAACCGAACGAAGCCGAAAGTGTGTTGATCGACGATATAAAAACGTCCTTAGGCGATCCCGATGTTGCCGACAAAAAGGACGTTAAATGCTTGCCTTGTCATCTATGCAGCTCAGTGTTTGCAAGTTATAAAGGTTTGAAAACACATAAAAGTCAAGTTCACAGTAGTGGGGCAAAGTATAAGTGCGATACTTGTGGCGAAGATTTACTtaccgaaattaaatttaacgaacaCTTAAAAATTCATCCGCTGGAGTGTCGTATATgcggaaaatatttttatagacGTCAAAACATACAACTGCACATGAAAAGACATCTTGGAATCAAACCTTATACCTGCCAGTTTTGCCAAAAGTGTTTcttaacgaaacaaaaattagacgAACATAAAAACACACACACGGGAGAGGCACCTATTAAGTGCAACATGTGCGACGAATCGTTTAGAAGACATTCAAACTTAGTACAACATAGGAATCGGCACCATTTCAacataaaaaagaaagttaaagATTACATTTGTTATTGTGGCGAAATTTTAcattcaaaaaagaaattggcgTGGCATAAAGAAATTCACGATGTAAAACCAAAAGCGTGTACTCAGTGTAACGAAAAATTTGTGCACGTCGCCAGTTTAACTAGGCACATGCGAAGAGCACATAACGAACGGTTCGTTCCGACAGAAGAAAGAAATACCGAAAATGTCGAGTGTCCAATCTGTAAAGGCGTTTACTTACGGTCGTCGTTAGAAGTTCATGTACGTAATCATAGTGGTACTAGGCCCTTTACTTGTTCGATTTGCAACAAAGATTTCACCACAAAGTGGAATTTAAAGTTACACAAGTGGATTCATGCGGGTCGTGCTTCGAAACCTTTCAAATGTGATCAGTGTAAAGGCGCTTTTATAAGAGAAGCCGATTATGTAGCTCATATGAACTCGCACAAAAGTATTAGGCCTTATACTTGCAATTATTGCGGCGCTcaatttatacgaaaatacaACTGCCAAAGACACGTTAAAGAGCACGAGAAAGATAAAACTTATGCGTGTCCCGTTTGTAACAAGAGCTTTCACAGATCTTATTATCTCAAGGATCACATGCGTGTTCATAGCGGAATTAGGCCTTACACTTGTCACGTATGTGGCAAAACGTCGACTACCAAATCTAATCATAATAAGCACGTGATGATTCATCACGCTAAAGAACCCATAAGTACAGAAAATTGA
Protein Sequence: MDSNNTVCPVCTLFLRPGITLTSHLSSHPKQKVIEALVTLAASSKNDVKDLAIINPPANEVPSVPVVNNPVWPQPVNGFTQIPTNHSFIYQQFMSTTSQPPTTPVNVNPLSQQYVSIPTVFNPQLICQPYMYQQQQFIMSAGSAVHPLPSPGRKPQIIDLSSDLEPVQSTEITYEPEKEEVKDDSKEEEETIVIDDEEASNKVEEAIELTEELMLDKDEKDEDDIQLNEDKDLEDYDDDYENVNSPTSSVESDYLRVRTDLNKACQTQQIAHIDIDEDSEAGEIITPDFFHLTTESVVASSVEPSQAEKSVKFQGENVNVVQPKDQVIDMDGMQLVLCSDFMGSQLISQVEDFECITNRSERPILMNIGGMDGGSNEFEQSNVNLDQLAEESVSRESTNMSIRADEHMPPRGELSGQESNGAASDVTWSRSHYESNSATSTSYDLLARESWEGSDCSDSEVPPLQSRIPPRTDYNPDLDDTPTIVSITEPPLNFKCPICGEGFKCPKERRVHQSEVHDEKMDEKPSPCKVTNNIIGSRISKKPVKKLQIKPKATPEIKKENNFDNVFTNILNAEPNEAESVLIDDIKTSLGDPDVADKKDVKCLPCHLCSSVFASYKGLKTHKSQVHSSGAKYKCDTCGEDLLTEIKFNEHLKIHPLECRICGKYFYRRQNIQLHMKRHLGIKPYTCQFCQKCFLTKQKLDEHKNTHTGEAPIKCNMCDESFRRHSNLVQHRNRHHFNIKKKVKDYICYCGEILHSKKKLAWHKEIHDVKPKACTQCNEKFVHVASLTRHMRRAHNERFVPTEERNTENVECPICKGVYLRSSLEVHVRNHSGTRPFTCSICNKDFTTKWNLKLHKWIHAGRASKPFKCDQCKGAFIREADYVAHMNSHKSIRPYTCNYCGAQFIRKYNCQRHVKEHEKDKTYACPVCNKSFHRSYYLKDHMRVHSGIRPYTCHVCGKTSTTKSNHNKHVMIHHAKEPISTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00951224;
90% Identity: -
80% Identity: -