Mfla000520.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malthinus flaveolus
Gene Symbol
-
Assembly
GCA_950108345.1
Location
OX467285.1:8096446-8098246[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00024 0.017 15.8 1.4 1 23 79 101 79 101 0.98
2 16 0.44 30 5.5 0.1 5 23 131 150 130 150 0.89
3 16 0.0017 0.12 13.1 5.4 1 23 156 178 156 178 0.99
4 16 0.023 1.6 9.5 7.0 1 23 184 206 184 206 0.98
5 16 6.7e-05 0.0046 17.5 2.8 1 23 212 234 212 234 0.98
6 16 0.012 0.82 10.5 2.8 1 23 240 262 240 262 0.92
7 16 0.00017 0.012 16.3 1.0 1 23 268 290 268 290 0.98
8 16 0.014 0.92 10.3 4.1 1 23 296 318 296 318 0.97
9 16 0.00017 0.012 16.3 3.0 1 23 325 347 325 347 0.97
10 16 1.8e-05 0.0012 19.3 1.9 1 23 353 375 353 375 0.98
11 16 0.00027 0.018 15.7 1.3 1 23 381 403 381 403 0.95
12 16 1.8e-05 0.0012 19.3 1.3 1 23 409 431 409 431 0.98
13 16 0.0014 0.092 13.4 5.5 1 23 439 461 439 461 0.98
14 16 0.0076 0.51 11.1 4.5 1 23 467 489 467 489 0.98
15 16 0.00025 0.017 15.8 0.5 1 23 495 517 495 517 0.98
16 16 6.4e-05 0.0044 17.6 2.7 2 23 524 545 523 545 0.97

Sequence Information

Coding Sequence
ATGGAATTAACAATGAAAAAGGAACAAGTTCAACATCCTACTTTTGAGTTCTGCGATACCTCTAACAGTTTTGgCGTTGCAGATAAAGCTGTTAAACAAGAACCTTGTTACGATAACTTTTACCAAGTTGGCTCTATCAAATTAGAAGATTATGAGTTGGAGGAACCTGCTCAGGAATTTGTTAACATagaaaaaaacgaagaaaatagTCTAGAAGTCATCAAAGACGAAGTATACTACTGTTATAATTGCGATTTTACGAGTTCTCAAAAATCGAGTTTAATTGTTCATGTGCAGAAGCATACAGATCTAAATGAGCATTTGTTTAATACAACTAAGTCGCAACAGAAAAATGATAGTAATTCAAGTGAAATACCTTTCTATTCTACAATTTGCGAGTATACGTCTGCCGACAAGTCAAATTTAAACGGACACAACATGTTGActcacacaggtgaaaaactatttcaatGTAATATGTGTGAATATAAATCTACCCATAAGCCGCATGTAAGTCGACACATGATGACTCACACACGTGAGAAACCTTTCCATTGTACATTTTGTCAATACAAATCATCTAGAAAGTGTGCATTAAACTTGCACATGTTGActcatacaggtgaaaaatcCTTTAACTGTACTATTTGTGAATATAAATCTGTCAACAAGTCTCATTTAAGTCAACACATGTTGACTCACAACGGTGAGAAACCTTTCCATTGTACAATTTGTGAATACAAATCTTCCAGAAAGTTTGGATTAACGTCGCACATGTGGActcacacaggtgaaaaacccTTTAATTGTACTATTTGTGATTATAAATCAGTCAACAAGTCGCGTTTAAGTGAACACATGCTGACTCACATAGATGAGAAACCTTTCCATTGTACAATTTGCGAATACAAATCCTCGAGTAAGTGTGGATTAAGCTCCCACATGTTGATTCACACAGGTGAAAGAAAATGTTTCCCTTGTTCAATTTGCGAATTCAAATGCTACAAAGCCTCGAATTTAAAGAGACACATGTTTGTTCACACAGGAGAAAAACCTTTCATATGTACCATTTGTGGACGCAAATACGCGAATAATTGCAGTTTAAAGAACCACGTCTTGACGCATATTAATGAAAAACCTTTCCTTTGTACAATTTGCCAGTATAAGTGTATCGATAAGGCAGATTTAAACAGTCATATGTCGATTCATAAAGGCGATAAACTTTTCCAGTGTCTTATTTGTGATTACAAATCCGACGATAAGTCGAATTACAAGAGACACATGTCGATTCACACGGGTGAGAGTGAGAAACGTTTTCATTGTACAATTTGTACACGCAAATACTTTTCGAAGTACAGATTAAAGGTACACATGTTGACGCATACGGATGAAAAGCGTTTCCATTGTACcatttgcaattataaaactgctGAAAAGGCGTGTTTAAAACGTCACGTGTTGACTCATTcgagagaaaataattttcagtgTCTTAGTTGTGGATATAATTCGCCCGATAGGTCGAATTTCAACAGACACTTGTTGATTCACACAAGTGAAAAACTTTTGCGTTGTACAATTTGCAAATACAAATCTACCAAGAAGTATCTTCTCACTAGACACATGTTGActcacacaggtgaaaaacctaaACAAATTGTggataaaattgaagtttccGAATAG
Protein Sequence
MELTMKKEQVQHPTFEFCDTSNSFGVADKAVKQEPCYDNFYQVGSIKLEDYELEEPAQEFVNIEKNEENSLEVIKDEVYYCYNCDFTSSQKSSLIVHVQKHTDLNEHLFNTTKSQQKNDSNSSEIPFYSTICEYTSADKSNLNGHNMLTHTGEKLFQCNMCEYKSTHKPHVSRHMMTHTREKPFHCTFCQYKSSRKCALNLHMLTHTGEKSFNCTICEYKSVNKSHLSQHMLTHNGEKPFHCTICEYKSSRKFGLTSHMWTHTGEKPFNCTICDYKSVNKSRLSEHMLTHIDEKPFHCTICEYKSSSKCGLSSHMLIHTGERKCFPCSICEFKCYKASNLKRHMFVHTGEKPFICTICGRKYANNCSLKNHVLTHINEKPFLCTICQYKCIDKADLNSHMSIHKGDKLFQCLICDYKSDDKSNYKRHMSIHTGESEKRFHCTICTRKYFSKYRLKVHMLTHTDEKRFHCTICNYKTAEKACLKRHVLTHSRENNFQCLSCGYNSPDRSNFNRHLLIHTSEKLLRCTICKYKSTKKYLLTRHMLTHTGEKPKQIVDKIEVSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-