Mfla016490.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malthinus flaveolus
Gene Symbol
-
Assembly
GCA_950108345.1
Location
OX467289.1:12576129-12581674[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 9.6 6.5e+02 1.3 2.8 1 23 103 125 103 125 0.95
2 22 4.8e-08 3.3e-06 27.4 0.7 2 23 132 153 131 153 0.97
3 22 0.054 3.7 8.4 0.2 5 23 163 181 162 181 0.95
4 22 0.14 9.4 7.1 0.0 2 23 222 244 221 244 0.92
5 22 3 2e+02 2.9 0.0 9 22 255 268 253 268 0.87
6 22 9.7 6.6e+02 1.3 0.1 14 23 296 305 295 305 0.88
7 22 0.005 0.34 11.7 0.8 1 23 311 333 311 333 0.98
8 22 4.5e-06 0.0003 21.2 1.9 1 23 339 361 339 361 0.99
9 22 0.004 0.27 12.0 2.2 1 23 367 389 367 389 0.98
10 22 0.055 3.7 8.4 4.4 1 23 407 429 407 429 0.96
11 22 0.0019 0.13 13.0 0.8 1 23 435 457 435 457 0.98
12 22 0.0011 0.074 13.7 1.3 1 23 463 485 463 485 0.98
13 22 3.1e-05 0.0021 18.6 1.1 1 23 491 513 491 513 0.98
14 22 0.01 0.68 10.7 3.7 1 23 519 541 519 541 0.98
15 22 0.023 1.6 9.6 1.0 1 23 547 570 547 570 0.93
16 22 9.8e-05 0.0067 17.0 2.5 1 23 597 619 597 619 0.98
17 22 1.2 81 4.2 0.0 5 21 675 691 673 692 0.91
18 22 4.9e-05 0.0033 18.0 1.2 1 23 699 721 699 721 0.99
19 22 0.15 10 7.0 7.2 1 23 727 749 727 749 0.98
20 22 0.011 0.75 10.6 4.1 1 23 754 776 754 776 0.99
21 22 0.21 14 6.6 0.3 1 23 782 804 782 804 0.98
22 22 0.0028 0.19 12.5 7.0 1 23 810 833 810 833 0.96

Sequence Information

Coding Sequence
ATGGATATGAATATAAAAGAGGAACCCGAGGAGactgaagaaaatttgaatttgaaaagatGTGTTTTCGATTTAGaaCTTTGTAAAGATGAGGAATTGATAAGTGAAGAAAAGCATCTTATAGATGTACTCCAAGACGATAACTTCAACAACAGCAACCTAGAATCCACAGGTTTCGTCAACAAACGGCTTTTAGAAACTGATACGAATGTTCGTACTGGAAAAAATATTACGGTGGGTAAAGAAGACTTTATTAGTGAAGGTAAACTAACTATTCACAGGACAATGCAAACTAGAGAAAAACCATTCAAATGCATTGTTTGTAATCAAGGCTGTATTAGTCAACGTGCACTAACGTTTCACACGAAAAAACATAACGGTGAAAAGATACTTAAATGcaatatttgtaataaaagttttgctaCACAACAACAGCTACAAATTCATATGAGAGTTcatactggtgaaaaaccatcGACAAGCGACGTTTGTAATAGAAGTCTTAGCTCTCGAATTGCATTAAAAAGGCACACGGGGACACATACTGAAGAAGAACAATCGAAACGCGATGAATTAAATCAAGAACAAAAACTAACGACTACTTTAGAGTCTTGTAAAACTAAACCTACTCCAGAAAGCGAACCTACTGAAGAAAAGCCGCTTGTATGCAATGTTTGTAGTGCAGGTTTTGTCAACGAGGGATTTTTAGAAATTCATAAGGATGTTGTGCAtactagaaaaaatataacgGGTGATGACGAAGACTTTATTAGTCAAGGAGAACTAACTAATCACAGAAGAATGCAAACTGTAGAAAAACCATTCAAatgcattgttttaaataaaggaGATGATGATCGAAATGCGCTAGCAGTTCACGCGAAAGAAGCATTAACAATTCATATCAGAATACATACTGGAGAGAAACCGTTTAAATGCGTGGCTTGTAATGAAGCTTTTCCATGTCAAGATGCGTTAAAAAGTCATATTAGAAAACATAAGGGTGAAAAGATATTTAAATGTGatgtttgtaataaaagttttgcttTACAACGACAGTTACAGCTTCATAAAAGAACTCATACTGGagaaaaaccatttacatgCTATCTTTGCAATAGAGGCCTTTGCACTCGAATTTCGTTAATAATGCACATTAAAACACATAGTGGAGAGCAACCGTTTAAACGCGATGAATTAAATCCTCCGGAAAAACGATACTTGTGCGAAATATGTGGTTATAACTCTTTTAGTACTCATCACTTTAAAATCCACACTCGTATACATACCAAGGAGAGGCCATTTCCTTGTGAACTCTGCGACTATAAGGCTGGATATAAAAGAAGGCTGCAGCAACACATGCGAACacatacaaaagaaaaaaagtttcaatgcGAAATTTGTTCCGCTTCATTTGCACAAAGTAATAGTTTGCGTTGTCACATGGATATGCATACGGGTACAAAAAGGTTTAGTTGTTCTGTTTGTAACGCTAAGTTTCGTCAGAAGACTTCACTAACATcgcatttattagtacattcTGGAGAGAAGGATTATAAATGCGATATTTGTAATAATACATTTGCTAGACTAAACACTTTAAAATGTCATAGAAAGATACACACTGgagaaaaaccatttaaatgcAATGTTTGTAATAATGCCTTTAGAACTAAGAAAGTGATGGACGATCATGTTACGACTCAACATACTCTAGAAAAGATGAAACGTGCCGGAGACACAACTAAGCGTACTGGAGAAAAGACTAAACATACTGGAGAAAAGCCATTTAAATGCAAGGAGTGTGATTATAGTTGTGTGTCGAAAATTCTTCTAACACAGCATATGGGACGACATACAGATAAAGAGGAGTTAATAAGTGAAGAAAAGCATATTATAGATGTAATTGAAGATGATAACAGGAACGATTTCGATGACAGCAAAAGTGATCATCGTCTCAGTAAGGAAACTGCTGTTGATAACTCGACGAATTCAGTAACTGATACTACTAAGAGTAATTGCGTGTGTAGCATATCCTATGCAACTAAACCGGCGTTACGCACTCACTTATTAATACAGTCCGGAGAAAAAGCATATAAATGCACTATTTGTGATTATAGTAGTACGTTAAAACCTTCCCTAAAACAACACATGTTACGACATACTGGTCAAAAGCCATTTAAGTGTAACTTATGCAATTATAGTACTGCACATCGTTATCGTTTACACTATCATCGAAAAATACACACCAATGAAGAATTCAAATGTGACAAATGCTATTATAAGTGCATAAGCAAAAATAGCATGGTGCGTCATGTGCGAGTTCATTTTGGTGATAAACCGTATCAGTGTAGATCGTGTTGGGCTAAATTTGCTGAAATGGGCACTTTAGAAATTCACAAGAGTAAACACACTGGCGAAAAGCCGTTTCATTGTACGTTGTGCGATTATAAGTGCACCAGGAAACGATATTTAGAAAGGCATCAATTGGTGAAACATTCTGTTAGTAAGGAATAA
Protein Sequence
MDMNIKEEPEETEENLNLKRCVFDLELCKDEELISEEKHLIDVLQDDNFNNSNLESTGFVNKRLLETDTNVRTGKNITVGKEDFISEGKLTIHRTMQTREKPFKCIVCNQGCISQRALTFHTKKHNGEKILKCNICNKSFATQQQLQIHMRVHTGEKPSTSDVCNRSLSSRIALKRHTGTHTEEEQSKRDELNQEQKLTTTLESCKTKPTPESEPTEEKPLVCNVCSAGFVNEGFLEIHKDVVHTRKNITGDDEDFISQGELTNHRRMQTVEKPFKCIVLNKGDDDRNALAVHAKEALTIHIRIHTGEKPFKCVACNEAFPCQDALKSHIRKHKGEKIFKCDVCNKSFALQRQLQLHKRTHTGEKPFTCYLCNRGLCTRISLIMHIKTHSGEQPFKRDELNPPEKRYLCEICGYNSFSTHHFKIHTRIHTKERPFPCELCDYKAGYKRRLQQHMRTHTKEKKFQCEICSASFAQSNSLRCHMDMHTGTKRFSCSVCNAKFRQKTSLTSHLLVHSGEKDYKCDICNNTFARLNTLKCHRKIHTGEKPFKCNVCNNAFRTKKVMDDHVTTQHTLEKMKRAGDTTKRTGEKTKHTGEKPFKCKECDYSCVSKILLTQHMGRHTDKEELISEEKHIIDVIEDDNRNDFDDSKSDHRLSKETAVDNSTNSVTDTTKSNCVCSISYATKPALRTHLLIQSGEKAYKCTICDYSSTLKPSLKQHMLRHTGQKPFKCNLCNYSTAHRYRLHYHRKIHTNEEFKCDKCYYKCISKNSMVRHVRVHFGDKPYQCRSCWAKFAEMGTLEIHKSKHTGEKPFHCTLCDYKCTRKRYLERHQLVKHSVSKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-