Mfla012505.1
Basic Information
- Insect
- Malthinus flaveolus
- Gene Symbol
- BUD13
- Assembly
- GCA_950108345.1
- Location
- OX467287.1:27835068-27841028[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00048 0.033 14.8 0.1 1 23 882 904 882 904 0.95 2 12 6.3e-05 0.0043 17.6 1.6 1 23 912 934 912 934 0.99 3 12 0.002 0.14 12.9 1.0 3 23 943 963 943 963 0.99 4 12 2.4e-05 0.0017 18.9 3.0 1 23 969 991 969 991 0.98 5 12 0.00052 0.036 14.7 3.8 1 23 998 1020 998 1020 0.98 6 12 0.0016 0.11 13.2 0.7 1 23 1026 1048 1026 1048 0.96 7 12 4.6e-06 0.00031 21.2 0.3 1 23 1054 1076 1054 1076 0.98 8 12 6.8e-07 4.6e-05 23.8 0.8 1 23 1082 1105 1082 1105 0.96 9 12 1.7e-05 0.0011 19.5 0.6 1 23 1111 1134 1111 1134 0.96 10 12 1.9e-05 0.0013 19.3 1.6 1 23 1140 1162 1140 1162 0.99 11 12 0.00043 0.029 15.0 0.7 1 23 1168 1190 1168 1190 0.94 12 12 0.0056 0.38 11.5 0.1 1 21 1196 1216 1196 1220 0.92
Sequence Information
- Coding Sequence
- ATGGCTCAAATAGATAAAAAAGAGTACTTGAAGAAGTACTTATCTAGTGATTCTAAAAAtgagaagaaaaagaaacgtAAAAAGAAACCGGTAGCTGGTGCAagTGTTACGATAATCGACGACGATGTAGACTTATCCCACATAACTTCTCTTCAAGAAGCTGCTAGTTTAATGGAAGCCAACGAAGATGCTCCACAAGTAGTTGGTGTTATCGATGAGCGTCCTATGCATCTTAGAATATCTGATTACCAAACGAACCAGTGGAAGCCACTTGGGGCTGCCGAAGAGAACGAAAATGACCCTAATCAAGATGAAGAATTGACTCCTAAAGAGTTAGtatcgttaaaattaaaaaccaacagCTTTAGAATTAAAGATTACGATAGTAATAGTCACAAGAGTAATTTAGAAGGTATTACAAAAGTGAAAAGTTTAGATTCTAATACAAAAAGAACAAAAGATGATTACAGTCCTCCTAGAAGACGTGTGAAAGGTTCAGACTCGGACGCTAGTCCGACCCGTAAAAGGAGAGTTTCAAAAAGTCCCGATAATAGTCCTCcaagaaaaagagaaaaaagttcaGTGAGAGAAGGGAGTGTTGTTAACAGCCCATCTAGAACAGAAAGCTGCGACAACAGTCCTCCTCGACGACGTAGACCAAACACTGATAATAGCCCACCGAGAAGAAAGTCACCTACCGAATTTACAAGGAATTTAAGTAGGAGTTCATCACGAAAACTTGAGAGAAATGACTCGAGTCCTCCTAGAAGACAGAGAAGAGATACAGATAACAGTCCGCCTAGGAGGAAATCTCCAAGTCAATTTAGGAGAAATGTGGATAGAAGTCCGTCTCGAAGAAGTGAGAGAGATAGAGACACGAGCCCTTTTAGGAGGCCTAGTAAAGTTCTCGATGGTCCTTCTAAACTCAGTAAATCAAGTCCGCCAAGAAAAACTAGGTTTGATCAACCACACGAAAGAAAATCAAGTGAGGTCGAATCCAATAGTCAAAAATTAGATACTCCTCAAAGGAAACTATTACCTGGAAATTCCAAAGGGAAATACTTGATACCGGCAAAAcgtaatattgaaaaaatgacaaaaactCTCGATGGTAAAAGCGCTGGTTTGCAAAGTGCCAAAGATTTGGTACTAGAAACTCAGTTATTTCGTCAACGTGAAGATGAGATGTTTAAATCTATGTCAAATGAGGTTTCCGGATTTAATGCTGCCCCCGTATTTCGTGATCATAAAACCGGTAAAAAGCGCGATTTGGCAAAAGAAGCAGAAGAACGcagagaaaaagaaaaagtagaacaagaaaataaagaaaaatattcgCGTTGGGGACGAGGACTAAAACAAGTGCAGGATCAAGAAGATAAATTAGTGCAAGATTTACACGAGATGAATAAGCCGTTGGCTAGATATGCGGATGATGAGGATCTCGAAAATTATCTTAAATCTCAAGTTCGTGAAGGAGATCCTATGTTGGCTttcataaagaataaaaatccGCCTATACCTGGGACAGTTTTGAAACAACAAAGTGGTTATGATTTTATGCCAAACCGATTTGGTATTGCACCTGGGCCCAAATGGGATGGTGTGAATCGTTCTAATGGGTACGAAACCAAGTGGATACAAGGgcaaaatgaaaaactaacTTCTCAAGAAGAGTCTTATAAATGGAGCACCGAAGATatTATGTCGACAAGTGCAAAAGACAATATGCATTGCTTGATATGCAATGCAAGAGTTGGTGTTTCCACACGAACTtctatgcaaatttttggGAAAGAAaGTCTCACGTGTACAGACAAACCTTTGAGTCACGTAATATCGCAAGTTATAGAAGAGAAAATTTCGGAAGAGAGTGTACACTCTTTACTTGTGtgtaaaaagtgttttaaattaatagacgAGCTCGAAGAGCTAGAGCAACGTGCGGACGAAATTAAAGACGAGATAGCCGATAATTATCAGAGAACTATCGATAGTATTAAGAATGGTGGTGAAGAAGGGGACGATAATGACAAGAGTGTAAGTAGGGATATCTCTAAAGAAAATTCGGTTcctaagaaaattttagaaattcctTCATCGGATGATGAAGAGAGAGAGGAAACTTCTGCAACAAATTCTAAAGGTGCATTTGAAACGATGGAAGCAATCGAGATGCAACTCGTAAAAATCCACGGTGAAGAGAAATCGAGTACTGGAAATGTAAAAGTGCTAAATACCATGGATATAAATAGTAGAGAATTTCAAGAGTTCCACGAAAATATAATGGATGCAGGTGCTGTTCACAATTCGTCTGACTCTGACTACGAACCTCCTGGAGACAATACAGATGCTCTTTTACAGGCGGCTGCTATTGCCGAAAAGAATTTAGAAagagtaaatattaaattggaaATGGATGTGGAACAGGCTGTGAAACCAAATATACTAAGAAAGAAAGATACAACGGAAGATAAGAAATTTCCCAAttcaattaagaaaattaaggaGGAATTACTTGCACCTaTTGTAAGCAGAGATGGGGCGACTTATACTTGTTTACTTTGTGAAGGTGACCAGACCGTATGTGGCGAAGCCAAAGGAATAATTATACATATTAAACAAGCACACGACGAACGTCTTTACATTTGTGATGTTTGTGGACAAGATTTTAGAAAACGTAATGAGCTCTCGGCTCATTTGGACGAGCATGTTGCTACCGAAGAGGGAGATTTCCAATGTGAAGTGTGTAATCgaatttttagcaatttaaGATTGTTTAGAATACACAAACGTATGCATTATCCCCAAAATAAGGCGTGGGGGTGTGAAATATGTAGTAAAAAATACAGttcaaaaaatCTTTTGGACGAACATTACAATACTCACACCGGTGTCAGGCCGTACATTTGCCACACTTGTGGCAAAGATTTTGCCTCGAAATATACATTTAAAGCGCACGAGAAAACTCATGAAGTGAGACCGAGGCCCTTTCAATGTCATAGTTGCAACaagtcatttttaagtcaacAAAACTTGACTCAACACGAGCGAATCCATTCAGGTATTAAAGAGTTTTCTTGTCAATTATGTTCCAAACAATTTGGGTCGGCACACAATTTAGAAGTTCATTCTATAGTTCATACTGGTTATAAGCCGTTTTCTTGTAAAGAATGTGGTAAAGCTTTTGCTCGTAAAGCCGAAATACGAGATCACGAACGAACACACACTGGTGAAAGGCCTTATCAATGTGAAATGTGTGGGGCAACGTTTAGTCAACGTTCCAATTTGCAGTCGCACAAACGAGCAACACATTACGACGATAAGCGATACAAGTGTCAGGAATGCGGAAAAGGATTTAAAAGGAGAAGgcTGCTCGATTACCATATTAAAGCCGCCCATACGGGAGAAAGACCATATAAATGTGCAGTGTGTGATGCGACTTTTGTTTATCCGGAACATTTCAAAAAGCACAGACGTATTcatactggtgaaaaaccatttttatgTGAAGTTTGTGGTAAAGCTTTCAACAGCCGCGATAACAGAAACTCGCATCGATTTGTTCATTCTGACAAAAAACCTTACGAATGTTTGGGTTGTGGAGCAGGTTTTATGCGTAAGCCTTTGCTTTACCAACATATGCAAGCACAAGGACACCTAAACGatacaattgttttaaatcaaCCTCGATTGATGTCCGACGATGACCAAGTTATTACGgtaAATGCTAACGGTGAAATGGAATTTGTGGAAGGTGACGCCCTTACAACCTTAGAGAGTATCGAAATGCACGACGAGGACGTTACCGAAGATTCAAAACTGTACATTGCTGAACATATGTTGGTCGAAGGCGGCGAAATGTTtgaagataccaaaaatttcgtGAGTCTCGACCAAGAACAATTGAACGAGAATGAAGCTATAGAACATATTATAATTGATGGACAGCAAATACAATTTGCCGAAGAAGGCGAAGAATTGGAAGACGACGAAGAGCAGCATGTCGATGGGCAAGAAATATTAGGCGACAGTGGAGATTTTGAAGAAATACTAAGTGAAGATAAGCTTATTAATGGAACGTCTCAAGTTGTACAAAGGCCAGATGGTCCTATAAGATTTGTTAAAGTTCAGTTACAGAATGAAAGTGGTGGACAAGAAGCATGGATAGAATTTGTGAGAAAGTAA
- Protein Sequence
- MAQIDKKEYLKKYLSSDSKNEKKKKRKKKPVAGASVTIIDDDVDLSHITSLQEAASLMEANEDAPQVVGVIDERPMHLRISDYQTNQWKPLGAAEENENDPNQDEELTPKELVSLKLKTNSFRIKDYDSNSHKSNLEGITKVKSLDSNTKRTKDDYSPPRRRVKGSDSDASPTRKRRVSKSPDNSPPRKREKSSVREGSVVNSPSRTESCDNSPPRRRRPNTDNSPPRRKSPTEFTRNLSRSSSRKLERNDSSPPRRQRRDTDNSPPRRKSPSQFRRNVDRSPSRRSERDRDTSPFRRPSKVLDGPSKLSKSSPPRKTRFDQPHERKSSEVESNSQKLDTPQRKLLPGNSKGKYLIPAKRNIEKMTKTLDGKSAGLQSAKDLVLETQLFRQREDEMFKSMSNEVSGFNAAPVFRDHKTGKKRDLAKEAEERREKEKVEQENKEKYSRWGRGLKQVQDQEDKLVQDLHEMNKPLARYADDEDLENYLKSQVREGDPMLAFIKNKNPPIPGTVLKQQSGYDFMPNRFGIAPGPKWDGVNRSNGYETKWIQGQNEKLTSQEESYKWSTEDIMSTSAKDNMHCLICNARVGVSTRTSMQIFGKESLTCTDKPLSHVISQVIEEKISEESVHSLLVCKKCFKLIDELEELEQRADEIKDEIADNYQRTIDSIKNGGEEGDDNDKSVSRDISKENSVPKKILEIPSSDDEEREETSATNSKGAFETMEAIEMQLVKIHGEEKSSTGNVKVLNTMDINSREFQEFHENIMDAGAVHNSSDSDYEPPGDNTDALLQAAAIAEKNLERVNIKLEMDVEQAVKPNILRKKDTTEDKKFPNSIKKIKEELLAPIVSRDGATYTCLLCEGDQTVCGEAKGIIIHIKQAHDERLYICDVCGQDFRKRNELSAHLDEHVATEEGDFQCEVCNRIFSNLRLFRIHKRMHYPQNKAWGCEICSKKYSSKNLLDEHYNTHTGVRPYICHTCGKDFASKYTFKAHEKTHEVRPRPFQCHSCNKSFLSQQNLTQHERIHSGIKEFSCQLCSKQFGSAHNLEVHSIVHTGYKPFSCKECGKAFARKAEIRDHERTHTGERPYQCEMCGATFSQRSNLQSHKRATHYDDKRYKCQECGKGFKRRRLLDYHIKAAHTGERPYKCAVCDATFVYPEHFKKHRRIHTGEKPFLCEVCGKAFNSRDNRNSHRFVHSDKKPYECLGCGAGFMRKPLLYQHMQAQGHLNDTIVLNQPRLMSDDDQVITVNANGEMEFVEGDALTTLESIEMHDEDVTEDSKLYIAEHMLVEGGEMFEDTKNFVSLDQEQLNENEAIEHIIIDGQQIQFAEEGEELEDDEEQHVDGQEILGDSGDFEEILSEDKLINGTSQVVQRPDGPIRFVKVQLQNESGGQEAWIEFVRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -