Mfla015717.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malthinus flaveolus
Gene Symbol
-
Assembly
GCA_950108345.1
Location
OX467289.1:1493180-1496563[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.00037 0.025 15.2 2.0 1 23 10 32 10 32 0.99
2 21 0.0019 0.13 13.0 3.7 1 23 38 60 38 60 0.98
3 21 0.072 4.9 8.0 3.4 1 23 66 88 66 88 0.98
4 21 0.00028 0.019 15.6 0.5 1 23 94 116 94 116 0.97
5 21 0.0014 0.097 13.4 0.5 1 23 122 144 122 144 0.98
6 21 0.00074 0.05 14.3 2.8 1 21 200 220 200 221 0.95
7 21 0.096 6.5 7.6 1.3 1 23 252 274 252 274 0.98
8 21 0.02 1.4 9.8 0.4 1 23 280 302 280 302 0.97
9 21 0.00032 0.022 15.4 1.8 1 23 305 327 305 327 0.99
10 21 0.033 2.3 9.1 3.9 1 23 333 355 333 355 0.97
11 21 1.4e-05 0.00093 19.7 5.1 1 23 361 383 361 383 0.99
12 21 0.00041 0.028 15.1 0.7 1 23 389 411 389 411 0.99
13 21 5.5e-05 0.0037 17.8 1.3 1 23 417 439 417 439 0.98
14 21 0.0017 0.12 13.1 7.0 1 23 445 467 445 467 0.98
15 21 8.6e-05 0.0058 17.2 0.5 1 23 473 495 473 495 0.98
16 21 0.00019 0.013 16.1 2.9 1 23 501 523 501 523 0.98
17 21 0.021 1.4 9.7 0.8 1 23 529 551 529 551 0.95
18 21 0.0011 0.073 13.8 4.5 1 23 557 579 557 579 0.98
19 21 0.16 11 6.9 0.5 1 23 585 607 585 607 0.94
20 21 8.7e-05 0.0059 17.2 0.8 1 23 613 635 613 635 0.95
21 21 0.008 0.54 11.0 2.3 1 23 641 663 641 663 0.98

Sequence Information

Coding Sequence
ATGATGAAACACACCGGAGAAAGACCTTATCAATGTAGCTTGTGCGAATACAAAAGTATAAAGAAGCAATCTTTAAATGAACACATGAGGAAACACACCGGAGAAAAACTTCATCAATGTAACTTGTGTGAATACAAAAGCATAAAGAAGCAATCTCTAAACGAGCACATGAGGAAACACACCGGAGAAAAACCTTATCATTGTAACTTGTGTGAATTCAAAAGCGAAGTTAAGAGAACTTTCACAAGACACATGTTGGTACACACAGATGGTAAGCCTTATCAATGTGATATTTGTGAGTATAAAAGCTTGCAGAGGTCTAACTTGAAAATACACATGATGATACACACAGGTGTAAAACCTTATCAATGTACTCAATGTGAATATAGAAGTATACAAAAGGTAGATATAAAGAAACACATGGCGATACACACAGgttcaattaaaatagaagaatatAATTTGGTAGAATCAATTAAAGAAGAACAAGAAGAAGAATGCATGAAGAAAGAATGGGAAAACGTAGcattggaagaaaatttagaaatgagTCGAGAGTATGTCTTCATAAAACAATCAGATTCTGATGAAAAACGTTTTCAGTGCACCATGTGCCATCGTACGTTTTTTAATAGAGACTGTTTAGATGTTCATATGTTGATATGTACACGTACGGATGGCCAACTTGAAATTGAGAAATTAAtcgaaaaagaagaaaacttgGAGACTAGTACAGACACGTGTAATAAGCAGTATCGGTGTGATCAGTGTGAATTTAAAACTGCATGGAAGAGATCTTTAAATAAGCACGTCATGCGACATGTAGGTGAAAAACCATATAAATGTGACTTGTGTGAATTTAGAACTGCACGGATAGCTTCTTTTAATAACCACATCTCGGAACACTCGCCATATAAATGCGACGTATGCGAATACAGAAGTAGCAAGAAACAACGTTTAAAAGAACATATGAGAATACACACAGACAATAAGCCTTATCAGTGTAATAACTGTGAGTACAAGTGTTTGTCGCAAAGCAGATTAAACAAACACATGGTATCACATACAGGTGAAAGACCTTTTCAGTGTTCCATCTGTGAATACAAATGTTCGAGAAATACAACTTTAAAGAAACACATGATGACAcatactggtgaaaaaccGTACCAGTGTAACTTATGCGAGTACAGAAGTATACAAACCGCATCTTTAAAAGAGCACATGATGAAACACACCggtgagaaaccttttaaGTGCGACCTCTGCGACTATAAATGTTCTGTAAAAGGCAGTTTAAAGATTCATATGATTGTGCACACGGGCGAAAAGTCTTTTCATTGTACTTTTTGCGAATACAAATGTTCATCACAAGGAAGTTTAAAGACGCATATCAGACGACACACGGGTGAAAAACCTTATCGATGCACCATCTGCGAATACAAATCTTCATTACCGGcgaatttaaaaacgcacATGATTAAACACACAGGCGAGAAGCCGTATCGGTGCGGTAGTTGTGAATATAAATGTTCAAGAAAAGCAGACTTAAAGAGACACGTTTTGACGCACACTggcgaaaaactttttaaatgcaCGACTTGCGATTacaaaagtttgagaaaagcaGACTTAAAGATTCACGTCACCATACACACGGgcgaaaaacattttcagtGCGATGTGTGcgaatttaaatgtttgagaaaagcaaattttaacaGGCATATGAGAACGCACACTGGCGTCAATCTTTATCGATGCGATCTCTGTGAATACGAATGTTTAAGCCGAGCAAATTTAAAGATACATGCGGTTGTACACACGGGCGAAGAGCTTTTTGAGTGTTCCATTTGCGGATTTAAGTCTTTGAGGAAGGCTAGTTTAAGGAGGCACATGAGAATACACACGGGTGAAAAACTTTATCGGTGTGATTTATGTGATTTTAGGAGTGGACACAAGCAATCTGTAACGAGGCACATGAGCGTTCATGCTACAGAAGTGAAAAGGGCTATCGATGTGGgttatacagagtgtctctAA
Protein Sequence
MMKHTGERPYQCSLCEYKSIKKQSLNEHMRKHTGEKLHQCNLCEYKSIKKQSLNEHMRKHTGEKPYHCNLCEFKSEVKRTFTRHMLVHTDGKPYQCDICEYKSLQRSNLKIHMMIHTGVKPYQCTQCEYRSIQKVDIKKHMAIHTGSIKIEEYNLVESIKEEQEEECMKKEWENVALEENLEMSREYVFIKQSDSDEKRFQCTMCHRTFFNRDCLDVHMLICTRTDGQLEIEKLIEKEENLETSTDTCNKQYRCDQCEFKTAWKRSLNKHVMRHVGEKPYKCDLCEFRTARIASFNNHISEHSPYKCDVCEYRSSKKQRLKEHMRIHTDNKPYQCNNCEYKCLSQSRLNKHMVSHTGERPFQCSICEYKCSRNTTLKKHMMTHTGEKPYQCNLCEYRSIQTASLKEHMMKHTGEKPFKCDLCDYKCSVKGSLKIHMIVHTGEKSFHCTFCEYKCSSQGSLKTHIRRHTGEKPYRCTICEYKSSLPANLKTHMIKHTGEKPYRCGSCEYKCSRKADLKRHVLTHTGEKLFKCTTCDYKSLRKADLKIHVTIHTGEKHFQCDVCEFKCLRKANFNRHMRTHTGVNLYRCDLCEYECLSRANLKIHAVVHTGEELFECSICGFKSLRKASLRRHMRIHTGEKLYRCDLCDFRSGHKQSVTRHMSVHATEVKRAIDVGYTECL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-