Basic Information

Insect: Malthinus flaveolus
Gene Symbol: -
Assembly: GCA_950108345.1
Location: OX467287.1:7222348-7227979[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 8.2e-05 0.0056 17.3 2.2 2 23 152 173 151 173 0.97

2 24 0.096 6.5 7.6 1.9 1 23 177 199 177 199 0.97

3 24 3.3 2.2e+02 2.8 0.1 1 23 205 228 205 228 0.92

4 24 0.0043 0.29 11.9 1.8 1 19 234 252 234 256 0.92

5 24 0.033 2.2 9.1 3.8 1 23 262 285 262 285 0.98

6 24 0.0011 0.076 13.7 4.9 1 23 296 318 296 318 0.97

7 24 0.00023 0.016 15.8 0.6 2 23 324 345 324 345 0.97

8 24 4.4e-05 0.003 18.1 2.7 1 23 351 373 351 373 0.98

9 24 3e-06 0.0002 21.8 0.9 1 23 379 401 379 401 0.98

10 24 1.6 1.1e+02 3.8 0.1 1 10 407 416 407 420 0.89

11 24 5.3 3.6e+02 2.1 0.9 2 12 459 469 458 474 0.85

12 24 0.055 3.7 8.4 1.4 1 23 481 503 481 503 0.96

13 24 0.0052 0.35 11.6 0.1 1 23 508 530 508 530 0.97

14 24 0.00029 0.02 15.5 2.3 2 23 568 589 567 589 0.97

15 24 0.012 0.81 10.5 0.5 1 23 609 631 609 631 0.98

16 24 3 2e+02 2.9 4.0 1 23 635 657 635 657 0.82

17 24 0.042 2.9 8.7 2.0 1 23 663 686 663 686 0.98

18 24 0.0033 0.22 12.2 1.5 1 23 692 714 692 714 0.97

19 24 0.00015 0.01 16.5 1.0 1 23 720 743 720 743 0.97

20 24 2.2e-05 0.0015 19.1 1.3 2 23 755 776 754 776 0.97

21 24 1.9e-05 0.0013 19.2 0.8 3 23 791 811 789 811 0.96

22 24 9.8e-06 0.00067 20.2 1.4 1 23 817 839 817 839 0.98

23 24 7.4e-06 0.0005 20.6 1.1 1 23 845 867 845 867 0.98

24 24 0.28 19 6.1 0.3 1 21 873 893 873 894 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	8.2e-05	0.0056	17.3	2.2	2	23	152	173	151	173	0.97
2	24	0.096	6.5	7.6	1.9	1	23	177	199	177	199	0.97
3	24	3.3	2.2e+02	2.8	0.1	1	23	205	228	205	228	0.92
4	24	0.0043	0.29	11.9	1.8	1	19	234	252	234	256	0.92
5	24	0.033	2.2	9.1	3.8	1	23	262	285	262	285	0.98
6	24	0.0011	0.076	13.7	4.9	1	23	296	318	296	318	0.97
7	24	0.00023	0.016	15.8	0.6	2	23	324	345	324	345	0.97
8	24	4.4e-05	0.003	18.1	2.7	1	23	351	373	351	373	0.98
9	24	3e-06	0.0002	21.8	0.9	1	23	379	401	379	401	0.98
10	24	1.6	1.1e+02	3.8	0.1	1	10	407	416	407	420	0.89
11	24	5.3	3.6e+02	2.1	0.9	2	12	459	469	458	474	0.85
12	24	0.055	3.7	8.4	1.4	1	23	481	503	481	503	0.96
13	24	0.0052	0.35	11.6	0.1	1	23	508	530	508	530	0.97
14	24	0.00029	0.02	15.5	2.3	2	23	568	589	567	589	0.97
15	24	0.012	0.81	10.5	0.5	1	23	609	631	609	631	0.98
16	24	3	2e+02	2.9	4.0	1	23	635	657	635	657	0.82
17	24	0.042	2.9	8.7	2.0	1	23	663	686	663	686	0.98
18	24	0.0033	0.22	12.2	1.5	1	23	692	714	692	714	0.97
19	24	0.00015	0.01	16.5	1.0	1	23	720	743	720	743	0.97
20	24	2.2e-05	0.0015	19.1	1.3	2	23	755	776	754	776	0.97
21	24	1.9e-05	0.0013	19.2	0.8	3	23	791	811	789	811	0.96
22	24	9.8e-06	0.00067	20.2	1.4	1	23	817	839	817	839	0.98
23	24	7.4e-06	0.0005	20.6	1.1	1	23	845	867	845	867	0.98
24	24	0.28	19	6.1	0.3	1	21	873	893	873	894	0.92

Sequence Information

Coding Sequence: ATGTTACTGAGTTTATTGTTTTATGCAAGGTGttccaaaattgataaatattcGGAATGCGGGCACTTGACTAATGTTGGgTTTAATTTCAATCATTTGGCACCAATTATAACAATTAGAGAAATTAGTtcgttaaaaagtaaaagaggTCGTCCAAAGAAAACCAAAACTAACAATACCACTTCCTCGACCAAAAAAGTGCGAACAAAAAAGTCTCCACCCAAGCCCAGTTTGAGTAAACCTGTTTTGCACGAAGTTAGAATTAAACAAGAACCCATTTCGGACGAATACGAAAGCGAATCGTTGCCAAACAGCCACgaacttaaatttttcgtcTGTCACGTTTGTAAAGATGAAGTGAAAATGACCGAAAAAGAACTACGTCGACATTTTAAGGACGAGCATCAAGGTAAAAGGTTGAGGAGTTTGAAATTACATTCTGGAAATCCGGTGTCGTGTGACGTGTGTCACAAGCAATTTCGCTCTTCAAAAAGTTGGAAGGAACACATGGAAACTCACAGCAATGTGTTTAACTGCGAGACGtgtaattttcagtttaaaaaaatcttggACTATACTCTTCATTTACGTTTACACGATCCGGAAGACGTATTTAGATGCGTGTTATGCGACTTCGTGACCGACTCGATTAACGAAATAACGGAACACGTGAACAATACTCACAATCAAAACTTTAAGTATAAATGCAAGATTTGCGGAAAGGGATTTCACGTGCTCTCTTGGTTTCAAGAACACGATAATTACCACAGCGGATTGAAACCGTTTAAATGCGAGTTTTGCGACCAGCACTTTTTGTATTCGCGTTATTTGACTGCACATAAAAATACCGTTCATAAGGAGGAATTGACCGACGTTCCGAGTACTCACGAAtgcgttatttgtaaaaagaaataCCAGcataaaaacagtttaaaactTCACATGAACGTTCATACGGGAAACGTCGCCGTTTGCGACGTATGTGGAAAATCTCTTTCtagtaaagaaaaattaaagtttcacaTGCGTATTCATACCGGTTACAAGCCGTTTAGTTGCAGTTTTTGTGGAAAATGTTTTACTAAAAAGCCTACTTTGGTGGAGCACGAGCGAATTcatactggtgaaaagccGTACACTTGCGAATATTGTTCTAGACGTTTTTCACAAAGATCTAGTTTAGTTATTCACGTACGTGGACATACGGGGGAAAAACCGTATGCTTGTCATATCTGTAGTAGAAGTTATGTTGCCAGAGCCATGTCCGGTTTTAGAAGTTTTGGTCACTTGGCGATTTATTCGCGCGACAATAATGCAAAACGCGAAGATCCTTTAAAAGCAAGAAATTTAAACGGAAAAACGAACGACGGTTGTATATGCCCTTACTGTGGGGTATCTGTGAAACGTATAAAGAAACATATCGCAAATGTTCACGGCAATTTTAGTTGTAACGTTTGTTTGGAGACATTCTTAAACCAAGAAAGCCTGAACGAGCATAGAGAACATCATGAAAACAACCCTTTTCCTTGTGCCGAGTGTAATCTGAGCTTTAAAAAACCAATAGATTGGGCCCTACACTCTCGCAGTCATTGTTCTTTGAGCAGTTACCAgacgttaaataaagtaaaaagagAAGTACTCGATAATTTTGAAGGAATACTTTCGTTTAGTGCAAAACGAAAAAGAGAAAAGCACATGTGGACTTGCCGAAAATGCGACGCATCTTTTAGTACCTCGAGAAGATTACGCGACCATCGAAAAACCCATAGAAAAGAAGAAAGCGACGCTCAATACGAATATAAATATGACGAACACAAAGACAATTACGTTTGCTTTACTTGCGATGTGGAGTGTTCGACAAAAAAGGAAATCGAAGACCACATTTTGGTCCATgcagaaaagtttaaatgcgAAGTTTGtgataagtattttttaaagccgTACGAATATTCGTGCCATATGTATAACCACGATAAGTCCAAAGGCTTTCAGTGCCCGTTTTGTAAGCACGAAACTAACAGAAGAACCGCCATATCGATTCACATCAACACGTATCACTTAAGAAAGTTCATTTACACGTGCGAATTGTGCGGAAAAGGTTTTAACGATTGTCTACTGTACAAAGAACACAACAACATTCACGAAGGCATTAAGCCATTTCAGTGCGTAGTTTGTTCGAAGGATTTTGCTTTTTCTAGCTATTTAACGACGCACCAAATTCGTAACCATCGTGTTATGATCGAAGGGGTGATCGGGACAAATCAGTGCTATGTTTGTTATAGGAGTTTCACTCGTGCCAACACTTTGGAAAAGCACATGCTACGACACCAAAATTTTGGCGAGAAGAGGGTGCACGAGAAAAAACATTTGTGCGATATTTGTGGAAAGGGTTTTGCTCGAACTGAAAAGCTTCGTATACACTATAGGGTTCATACGGGAGTGAAACCGTATACTTGTTCGTATTGCGCAaagagttttacaaaaaaggaTTATTTGATAATGCACGAACGAGTTCACAGTGGGGAAAAGCCGTATTCTTGCGAATATTgtggaaaatgttttaatcAGGGTGCGCCCTTAAGGTTGCATATTAGAAGTCATACGGGAGAAAGGCCCTATATTTGTCATTTGTGTAATTCTGGCTTTATTTCCAGAGGCGTActgaatttacattttaaaagctGTCCCGGCAGtccaatttaa
Protein Sequence: MLLSLLFYARCSKIDKYSECGHLTNVGFNFNHLAPIITIREISSLKSKRGRPKKTKTNNTTSSTKKVRTKKSPPKPSLSKPVLHEVRIKQEPISDEYESESLPNSHELKFFVCHVCKDEVKMTEKELRRHFKDEHQGKRLRSLKLHSGNPVSCDVCHKQFRSSKSWKEHMETHSNVFNCETCNFQFKKILDYTLHLRLHDPEDVFRCVLCDFVTDSINEITEHVNNTHNQNFKYKCKICGKGFHVLSWFQEHDNYHSGLKPFKCEFCDQHFLYSRYLTAHKNTVHKEELTDVPSTHECVICKKKYQHKNSLKLHMNVHTGNVAVCDVCGKSLSSKEKLKFHMRIHTGYKPFSCSFCGKCFTKKPTLVEHERIHTGEKPYTCEYCSRRFSQRSSLVIHVRGHTGEKPYACHICSRSYVARAMSGFRSFGHLAIYSRDNNAKREDPLKARNLNGKTNDGCICPYCGVSVKRIKKHIANVHGNFSCNVCLETFLNQESLNEHREHHENNPFPCAECNLSFKKPIDWALHSRSHCSLSSYQTLNKVKREVLDNFEGILSFSAKRKREKHMWTCRKCDASFSTSRRLRDHRKTHRKEESDAQYEYKYDEHKDNYVCFTCDVECSTKKEIEDHILVHAEKFKCEVCDKYFLKPYEYSCHMYNHDKSKGFQCPFCKHETNRRTAISIHINTYHLRKFIYTCELCGKGFNDCLLYKEHNNIHEGIKPFQCVVCSKDFAFSSYLTTHQIRNHRVMIEGVIGTNQCYVCYRSFTRANTLEKHMLRHQNFGEKRVHEKKHLCDICGKGFARTEKLRIHYRVHTGVKPYTCSYCAKSFTKKDYLIMHERVHSGEKPYSCEYCGKCFNQGAPLRLHIRSHTGERPYICHLCNSGFISRGVLNLHFKSCPGSPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -