Mfla016520.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malthinus flaveolus
Gene Symbol
-
Assembly
GCA_950108345.1
Location
OX467289.1:12974696-12977281[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 5.8 4e+02 2.0 0.0 10 21 104 115 103 116 0.90
2 21 0.13 8.6 7.2 1.5 1 23 123 145 123 145 0.97
3 21 1.6e-05 0.0011 19.5 1.5 1 23 151 173 151 173 0.98
4 21 5.9e-06 0.0004 20.9 1.4 1 23 179 201 179 201 0.99
5 21 9.1e-05 0.0062 17.1 0.2 2 23 273 294 272 294 0.96
6 21 0.4 27 5.7 1.5 1 23 320 342 320 342 0.96
7 21 0.0085 0.58 10.9 2.9 1 23 344 366 344 366 0.97
8 21 0.00013 0.0088 16.6 0.3 1 23 372 394 372 394 0.98
9 21 3.5e-06 0.00024 21.6 1.6 3 23 402 422 401 422 0.99
10 21 0.00011 0.0073 16.9 1.9 1 23 437 459 437 459 0.99
11 21 0.0016 0.11 13.2 0.4 1 23 509 531 509 531 0.98
12 21 0.0013 0.092 13.4 1.7 1 23 537 559 537 559 0.99
13 21 9.9e-06 0.00067 20.2 1.4 1 23 565 587 565 587 0.99
14 21 0.00041 0.028 15.1 1.5 1 23 593 615 593 615 0.98
15 21 0.38 26 5.7 6.3 3 23 635 655 633 655 0.95
16 21 0.0019 0.13 13.0 0.8 1 23 661 683 661 683 0.98
17 21 8.4e-05 0.0057 17.2 0.4 1 23 689 711 689 711 0.98
18 21 0.0032 0.22 12.3 0.2 1 23 717 739 717 739 0.98
19 21 9.9e-05 0.0068 17.0 2.3 1 23 745 767 745 767 0.99
20 21 0.0034 0.23 12.2 2.0 1 23 773 795 773 795 0.98
21 21 0.00046 0.031 14.9 1.0 1 23 801 823 801 823 0.98

Sequence Information

Coding Sequence
ATGGATTCATCTGGACGAAAAGTCGTTTCTGTGTATTATTCACCACCAACAGATTCGAGTatggatttaaatttaaaacaggAACCCGAAGAGcttgaagaaaatttggatTATAAAGCGTGTGTTTTCGATTTGGgGCTTTGTAAAGATGAGGAATTGATAAGTGAAGAAAAACATATTATAGATGTACTGAAAGTCGATAACTTCAACAATGGCAGTCGAGAACCTGCAAGTTTCTTCAACAAACGGCTTTTAACAATCGAAACGGATGTGCATACTGGAAAAAATATTACGATTGGCAATGACGGCTTTATTAGTCAAAGTAAACTGACTATTCACAGGAGAATACAAACTAGAGAAAAACCATTCAAATGCATTGTTTGTAAACAAGGCTGTATTAGTCAAAGCGCACTAACATTTCACATGCGAATACATGCTGCAGAGATGCCGTATAATTGTGCGACTTGTAATGAAGCTTTTAGAAGTCAAGATAGGTTGAAAAATCATATGAAAAAACATAAGCGTGAAAGGATATTTAAATGCGATGTTTGTAATCAACGGTTTGCTAAACAAAAACAGCTACAGATTCATACAAGAGTTCATACTGGCAAAACAACATTTATAAGTGATATTTGTAGTGGAGGTCTTGACTCCCAAATTCCATTAAAAATGCACACCGGTGCTCATACTGGAGAAGAACCCTTGAAACGTGATgaattaaatcaattaaatcaAGGACAGAAACTAACAAGTACTCTCAAGTGTCTTAAAACTGGACCTATTTCTGAAACAGAGCCCACTAAAGAGAAGTCGTTGGTATGCAATGTTTGTAATACAGGTTTCCGCAACaaagaacttttagaaatgcatacGAATGTGCatactgaaaaaaatattacagtCGGTAATAACCGCGAACTAACTATTCGCAAAAGAATGCAAACTAGAGAAAAACCATTCAAATGCATTGTTTGTAATAAAGGCTGTATTAGTCAACGTGCACTAACATTCCACATGAGCATACATACATTTATGTGTCCCGTTTGTAAAAAGTCTATAAAATGTCAACAGAAGTTGAAAAAACATATGGAAGTACATTTTGGAGACAAGCCATTTGTATGTACTGTTTGTGATAGACGCTATGATCGTTCAAGGTCTCTAGCAATTCACGCAAGTACACATAttagaaaaaagaaagttttatgCACTGTGTgtaagaaaaagtttaataatgaAAGTGAACTAAAACTTCACATGAGAATGCATGTTATAAAAGTTACCAAGAGAATACCTTTTAGAAGGAAGATATTTAGGTGCAGAGTTTGTAAAATGTATTTGAAAACTCAAGGTGAATTAACAACACATATGAGAACACATACTGATGAAGAATTTGCACTAGCTCTAGCATTACGCACTACAAAGCATcctaaacaaaagaaatttatgtGCCCTGCTTGTAAGAAAAGACATATTATAAAATCGCCATTAATAAGCACCgaaccaaaaacttttaaggAAATGCAATTTAACTGTAGTATTTGTAAAAAGCGTTGGTATTATAAAGAAGCATTAGCAATTCATATGAGAATCCATACTGGAGAGAAACCGTTCAAATGCGTGGTTTGTAATGAAGCTTTTAGATGTCAAGTTGCATTAAGAAACCATATTAAAAAGCATAAGGGTGAAAAGATATTTAAATGCGgtgtttgtaataaaagttttgcttTACAACGACAGCTACAAATTCATAAGAAAACTCATACTGGGGAGAAGCCATTTACATGCGATATTTGTAATAGAGGTCTTTGCACTCGAAAGTCATTAGTAATGCacattaaaatacataacGGAGAGCAACCATTTAAACGGGATGAATTAAATCTTCCGGAAAAACGACACTTGTGCGAAGTGTGTGGTTATAACACTTTTAGTACTCATCACTTTAAAATCCACACTCGTATACATACCAATGAGAGACCATTTCCTTGTGAGCTCTGCGACTATAAGGCCGGATATAAAAGAAGGCTGCAGCAACACATGCGAACACATACAAATGAAAAGAAGTTTAAATGCGAAATTTGTTCCGCTACATTTGCACAAAATAATCGTTTGCGTTCTCACATGGATATACATACAGATACAAAAAGGTTCAGTTGTTCTCTTTGTGACGCCAAGTTTCGTATAAAGCCGTCACTAGTGTCGCACTTATTAGTGCATTCTGGAGAAAAGCCATTTAAATGCGATGTTTGTAATAATACTTTTGCTAAACGAAATACTTTAAAAGCTCATAAAAAGACGCACACGGGAGAGAAACCATTTAAATGCTATAATTGTGATTATAATTGTGCGTCTAAAATTCTCCTAATACAGCATATGGGACGACATACGGGTTTAAGACGATTTAAGTGTAACTTATGCGATTACAGCGCCGCATATTCTAGTAGTTTGTCAGCACATAAGAAAAAGCattcttctaaaatttaa
Protein Sequence
MDSSGRKVVSVYYSPPTDSSMDLNLKQEPEELEENLDYKACVFDLGLCKDEELISEEKHIIDVLKVDNFNNGSREPASFFNKRLLTIETDVHTGKNITIGNDGFISQSKLTIHRRIQTREKPFKCIVCKQGCISQSALTFHMRIHAAEMPYNCATCNEAFRSQDRLKNHMKKHKRERIFKCDVCNQRFAKQKQLQIHTRVHTGKTTFISDICSGGLDSQIPLKMHTGAHTGEEPLKRDELNQLNQGQKLTSTLKCLKTGPISETEPTKEKSLVCNVCNTGFRNKELLEMHTNVHTEKNITVGNNRELTIRKRMQTREKPFKCIVCNKGCISQRALTFHMSIHTFMCPVCKKSIKCQQKLKKHMEVHFGDKPFVCTVCDRRYDRSRSLAIHASTHIRKKKVLCTVCKKKFNNESELKLHMRMHVIKVTKRIPFRRKIFRCRVCKMYLKTQGELTTHMRTHTDEEFALALALRTTKHPKQKKFMCPACKKRHIIKSPLISTEPKTFKEMQFNCSICKKRWYYKEALAIHMRIHTGEKPFKCVVCNEAFRCQVALRNHIKKHKGEKIFKCGVCNKSFALQRQLQIHKKTHTGEKPFTCDICNRGLCTRKSLVMHIKIHNGEQPFKRDELNLPEKRHLCEVCGYNTFSTHHFKIHTRIHTNERPFPCELCDYKAGYKRRLQQHMRTHTNEKKFKCEICSATFAQNNRLRSHMDIHTDTKRFSCSLCDAKFRIKPSLVSHLLVHSGEKPFKCDVCNNTFAKRNTLKAHKKTHTGEKPFKCYNCDYNCASKILLIQHMGRHTGLRRFKCNLCDYSAAYSSSLSAHKKKHSSKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-