Mfla012982.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malthinus flaveolus
Gene Symbol
-
Assembly
GCA_950108345.1
Location
OX467288.1:1667361-1669394[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.15 9.9 7.0 5.4 1 23 68 90 68 90 0.97
2 20 0.00083 0.056 14.1 4.7 1 23 122 144 122 144 0.98
3 20 1.3e-07 9.1e-06 26.0 1.9 1 23 150 172 150 172 0.98
4 20 0.00057 0.039 14.6 3.7 1 23 178 200 178 200 0.98
5 20 0.00064 0.044 14.5 1.8 1 23 206 228 206 228 0.99
6 20 0.00013 0.0085 16.7 3.5 1 23 234 256 234 256 0.98
7 20 0.00052 0.035 14.8 4.3 1 23 262 284 262 284 0.97
8 20 5.9e-05 0.0041 17.7 1.5 1 23 290 312 290 312 0.98
9 20 3.2e-05 0.0022 18.6 1.6 1 23 318 340 318 340 0.99
10 20 0.0015 0.1 13.3 4.6 1 23 346 368 346 368 0.98
11 20 0.00037 0.025 15.2 2.6 2 23 375 396 374 396 0.98
12 20 6e-06 0.00041 20.8 2.1 1 23 402 424 402 424 0.98
13 20 0.46 31 5.5 1.7 3 23 432 452 432 452 0.95
14 20 0.00016 0.011 16.4 4.2 1 23 458 480 458 480 0.98
15 20 0.0028 0.19 12.5 0.4 1 23 486 509 486 509 0.95
16 20 0.00041 0.028 15.1 3.3 2 23 517 538 516 538 0.98
17 20 0.0011 0.075 13.7 2.6 1 23 547 569 547 569 0.97
18 20 0.00014 0.0094 16.6 0.6 2 23 576 597 576 597 0.97
19 20 0.0078 0.53 11.0 3.5 2 23 604 625 603 625 0.96
20 20 0.00015 0.01 16.4 4.8 1 23 631 653 631 653 0.99

Sequence Information

Coding Sequence
ATGATCAAAGAAGAACAGACTGAAGATGTTTATGTAAAGTACTTGGATAACTTGAACCATTTTAGGATTGCAGACGAAGCAGTTAAAGAAAAACCTTGTTGCAACACCTCAAATAAAGTAGAGAAAGATGATCTGGAGGAACCGATTCAAGAAAccattaaaatggaaattctAGAGAATAGCTTTGAAATTAACAAGGTATACTGCTGTTCCAGTTGCGATTTTAAGTGTTCTAAAAAACCTAGTTTAACTACCCATGCTCAAATTCAcacaaatgaaaatataagtTCGTCTTGTACGAGTGCGACACGAGTCCAATATAAATTTCTCAAGTGTGAATTAACTCTGGTTGCTGATAAGCCTTACCATTGTTCTACTtgtgaaaacaaatttaagacAAAAGGAGGTTTAAAACGACACTTGTTCACACATACGGGTCGAAAACCTTTCGAGTGCGATTTATGTGGGCGTAACTTTTCGCGCAATTCGCATTTAGGAAGACACATGTTGACTCACACGGGCGATAAACATTATCAGTGTTATATATGTCAATACAAATGTTACcaaaaagaaagtttaaaaagtcaCATGGTGGTTCAtacaggtgagaaaccttttCAGTGTAACTTATGTGAGTATAAGGGTTCATTCAAGTCGGCTTTACACGTACACATGTTAACTCACACTGGTTATAAAAGTTACGAATGTTCTGTTTGTGACTACAAATGTACGCGAAGCGGAAGTTTAAGATATCACATGTTTAgtcacactggtgaaaagcgtTTTGAATGTTCTTTGTGTGAATATAAGTGTTCTTTGAAGTCACATTTAAACAGACACATGGTAATTCACACGGATAGTAAACCTTATGAGTGTTATGTGTGTGGATACAAATGCAATCGAAAAGGAAATTTACAAGATCACGTCGTGACTCATAGaagtgaaaaaccttttcagtGTAAATTATGTGAACTTAAGTTTTCTCTCAAAccgtatttaaataaacacatGTTAACTCACATGGCTGATAAGCGTCATAAGTGTTTTCTTTGTGGATACAAATGTATTCGTAAAGGAGTTTTAACACAACACATGTTAACTCACACAAGTGATAAACCGAACCAGTGTTCTATTTGTACATACAAGTGTATCTATAAGGGGGATTTGAAAAGACACTTGTTAACTCACACCCGCGATAGACCGTACGAGTGTTCTCTTTGTGATTACAAATGTATTCAAAaaggaaatttgaaaaaacacaTGTTGATTCATACAGATGAAAAGCGTCTTGGGTGTAATCTATGCGAGTATAAGTGTTGGCTCCAGTCGACTTTACAGAGACACATGGTAATTCACACGGATGATAAACTTTATCACTGTTATGTTTGTGGATACAAATGCAATCAAAAAGGAAACCTACGCGATCACATGTCGATTCACACAAATCAAAAACCCTTTCAGTGCAGTTTGTGCGCAGATAAGTTTTCTCTCAAGTCCCAATTAACAACGCACATGTTAGCAGCTCACACACCCGATGataaacttaataaatgtTCTGTTTGTGAGtacaaatgtaaaaaaagGGGAAATTTGAGACAACACATGTTGATTCACAACAACTATAAACGTGAAAAATCTTTTCAGTGTGTTGTATGTGAACAACAGTTTTATCTCAAGTCTCATTTAAAGAGACACTCGTTAATTCACACAGCTGTTCAACTCAACGAGTGTTCTTTTTGTGATTACAAGTCTGTTCAAAAGGGAAATTTGAAACAACACATGTTGATTCATACAGATGAAAAGCGTCTAAGTTGTAGTTTATGTAAGTATAAGTGTTGGCGCAAGTCCACTTTACAGAGGCACATGTTAATTCACACGAACGAACACCCTTTTCAGTGTTCTTTTTGTGAATACAAATGTAAACAAAAGGGAAATTTAACGCAACACTTATTGACTCACGTGGATGTTAAACCTATGCTCTAA
Protein Sequence
MIKEEQTEDVYVKYLDNLNHFRIADEAVKEKPCCNTSNKVEKDDLEEPIQETIKMEILENSFEINKVYCCSSCDFKCSKKPSLTTHAQIHTNENISSSCTSATRVQYKFLKCELTLVADKPYHCSTCENKFKTKGGLKRHLFTHTGRKPFECDLCGRNFSRNSHLGRHMLTHTGDKHYQCYICQYKCYQKESLKSHMVVHTGEKPFQCNLCEYKGSFKSALHVHMLTHTGYKSYECSVCDYKCTRSGSLRYHMFSHTGEKRFECSLCEYKCSLKSHLNRHMVIHTDSKPYECYVCGYKCNRKGNLQDHVVTHRSEKPFQCKLCELKFSLKPYLNKHMLTHMADKRHKCFLCGYKCIRKGVLTQHMLTHTSDKPNQCSICTYKCIYKGDLKRHLLTHTRDRPYECSLCDYKCIQKGNLKKHMLIHTDEKRLGCNLCEYKCWLQSTLQRHMVIHTDDKLYHCYVCGYKCNQKGNLRDHMSIHTNQKPFQCSLCADKFSLKSQLTTHMLAAHTPDDKLNKCSVCEYKCKKRGNLRQHMLIHNNYKREKSFQCVVCEQQFYLKSHLKRHSLIHTAVQLNECSFCDYKSVQKGNLKQHMLIHTDEKRLSCSLCKYKCWRKSTLQRHMLIHTNEHPFQCSFCEYKCKQKGNLTQHLLTHVDVKPML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-