Basic Information

Insect: Malthinus flaveolus
Gene Symbol: -
Assembly: GCA_950108345.1
Location: OX467289.1:18463920-18465971[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.2e-07 8.3e-06 26.2 1.3 1 23 269 291 269 291 0.98

2 12 9.1e-06 0.00062 20.3 7.1 1 23 297 319 297 319 0.98

3 12 3.9e-06 0.00027 21.4 0.8 1 23 325 347 325 347 0.99

4 12 0.034 2.3 9.0 3.2 1 23 353 375 353 375 0.95

5 12 0.002 0.14 12.9 3.1 1 23 381 403 381 403 0.97

6 12 2.9e-08 2e-06 28.1 4.1 1 23 409 431 409 431 0.99

7 12 2.9e-06 0.0002 21.8 1.8 3 23 438 458 436 458 0.96

8 12 1.4e-06 9.3e-05 22.9 2.8 1 23 464 486 464 486 0.99

9 12 2e-06 0.00014 22.3 1.2 1 23 491 513 491 513 0.98

10 12 1.8e-06 0.00012 22.5 4.1 2 23 520 541 519 541 0.98

11 12 1.3e-07 8.7e-06 26.1 1.5 1 23 547 569 547 569 0.98

12 12 9.6e-06 0.00065 20.2 3.3 1 23 575 597 575 597 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.2e-07	8.3e-06	26.2	1.3	1	23	269	291	269	291	0.98
2	12	9.1e-06	0.00062	20.3	7.1	1	23	297	319	297	319	0.98
3	12	3.9e-06	0.00027	21.4	0.8	1	23	325	347	325	347	0.99
4	12	0.034	2.3	9.0	3.2	1	23	353	375	353	375	0.95
5	12	0.002	0.14	12.9	3.1	1	23	381	403	381	403	0.97
6	12	2.9e-08	2e-06	28.1	4.1	1	23	409	431	409	431	0.99
7	12	2.9e-06	0.0002	21.8	1.8	3	23	438	458	436	458	0.96
8	12	1.4e-06	9.3e-05	22.9	2.8	1	23	464	486	464	486	0.99
9	12	2e-06	0.00014	22.3	1.2	1	23	491	513	491	513	0.98
10	12	1.8e-06	0.00012	22.5	4.1	2	23	520	541	519	541	0.98
11	12	1.3e-07	8.7e-06	26.1	1.5	1	23	547	569	547	569	0.98
12	12	9.6e-06	0.00065	20.2	3.3	1	23	575	597	575	597	0.98

Sequence Information

Coding Sequence: ATGTCATCACAATTAGTTTATCAAGAAAGCAGTCCCAACAATGGACTTTCAATTGATAATATATTTCACGTCGCCGATTGCTGTAGAGCTTGCTTACGAATTGAATGTTCCTTAACAGCTACAACAACACAAGACAATgattctattaaattttcggATAAATTAATTGCTTGTGTTTCGGAAGTGATATGGATGAAAGAAGGTCTTCCTTCGTTAATATGTACAACTTGTATAGACCGTTTAAGGGTGGCCTACGACTTTCGATCAATTTGTCTACAATCGGACAACACTCTACAACGTTACGTTAGTCACTTACAAGATGAGGCGAAACAAACATTAAATGGACAACGACCCCTCACGACACCTACCAAATTCGACTTCACTTTTCCGACACAAACGAATTACGAAGAAAACATACCATGCATAATCGAAGAGCCACAGAATGCCGAATATTTAcacctaaaacattttttggataaCGACGAAGTGTTAACAAAATCCGAACATCTAGTCGAAGTCACGACTTCTCGCGATGCAAGTCCTGACTCTGCTTCGATTGCAGTTAGTTTTATGACGGCCCATACTCAAGTTGATCCCTTGCAACTTTCACGACATCCACCCCaacaacaaaatcaaaatcagtACATTAAAACGGAAATCCATCAAATTCAACCGATACACCGAGACGAACAACAAACATTAGACTTTAAACCACCTAGACAAGTTATTAAACGTACGACCGGCATTCAGGTGCGTCCACCCACTCCATCCTCGACTCAAAGCGACGGAACCGAGTTGAAACCGTTCAACTGCACCGTGTGCGGTAAAAATTACCGCAAAAATGCCAATTTACGCATACACATGCGGACACACACTGGCGAAAAGCCGTTTGAATGCCGATACTGCGAAAAGAGGTTTTACCATTCGTCCCATTTGAGAGAACACATAAGAAGACACACCGGCGAGAAACCGTTCCAATGTGCCGTGTGCAACAAACGATTCACAATAAAAGGCGAGCTCACCATGCATATGAAATCGCACACCGGCGAGAAACCCTACGCGTGTACGTGCTGCGACAGGCGTTGTTTAACTGCGGCCGACTTGAAAGTGCACATGAGAACGCACACGGGAGAAAAGCCATTTTGCTGCCTTACTTGCGGCAAGAAGTTCGCCAGCACTTACATATTAAACTCGCACATTAAAACGCACACGGGCGAACGACCCTATTCATGCAACGTTTGCCAAAAGACCTTTACCCAATCGTCCCACCTAAATGTGCACATGCGCAAACACACTGGAGAAAAAGTCAACTGCAAAATGTGCGACGCCAAATTTACACACTCGTCCCAACTAACTGTCCACATGCGCGAACACACCGGAAAACAACCTTACAAGTGCACAATGTGCGACAAGGTTTGCAATTACGCCTCCGAATTGCAAACTCACATGATGAAACATACCGGCGAGAAATTTTCTTGCGTAACGtgcgataaaaaatttaccacGGCCGCTTATTTGCAAGAACACACGCGCACTCACACTGGTGAAAATTTATCGACTTGTACTATTTGTGATAGACAATTTACGCGACatcaatatttagaaaaacacATGCGGACTCACACCGGTGAAAAGCCTTATTCGTGTTACGTGTGCGGTAAGAAGTTTACTCAATCGTCGTCGTTGAAAGTTCACACGAGAATTCACACCGGTGAAAAACCTTATCATTGTCAAATTTGTGATCGTAGGTTTACGACTTCGTCCGATTTATCGGCGCATAATAAGAAGCATAAAaagtatattaatttgtaa
Protein Sequence: MSSQLVYQESSPNNGLSIDNIFHVADCCRACLRIECSLTATTTQDNDSIKFSDKLIACVSEVIWMKEGLPSLICTTCIDRLRVAYDFRSICLQSDNTLQRYVSHLQDEAKQTLNGQRPLTTPTKFDFTFPTQTNYEENIPCIIEEPQNAEYLHLKHFLDNDEVLTKSEHLVEVTTSRDASPDSASIAVSFMTAHTQVDPLQLSRHPPQQQNQNQYIKTEIHQIQPIHRDEQQTLDFKPPRQVIKRTTGIQVRPPTPSSTQSDGTELKPFNCTVCGKNYRKNANLRIHMRTHTGEKPFECRYCEKRFYHSSHLREHIRRHTGEKPFQCAVCNKRFTIKGELTMHMKSHTGEKPYACTCCDRRCLTAADLKVHMRTHTGEKPFCCLTCGKKFASTYILNSHIKTHTGERPYSCNVCQKTFTQSSHLNVHMRKHTGEKVNCKMCDAKFTHSSQLTVHMREHTGKQPYKCTMCDKVCNYASELQTHMMKHTGEKFSCVTCDKKFTTAAYLQEHTRTHTGENLSTCTICDRQFTRHQYLEKHMRTHTGEKPYSCYVCGKKFTQSSSLKVHTRIHTGEKPYHCQICDRRFTTSSDLSAHNKKHKKYINL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00854342; iTF_00951127;
90% Identity: iTF_00951127;
80% Identity: -