Mfla000434.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malthinus flaveolus
Gene Symbol
-
Assembly
GCA_950108345.1
Location
OX467285.1:7022289-7023992[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.01 0.71 10.7 5.4 1 23 82 104 82 104 0.99
2 16 3.7e-05 0.0025 18.4 1.6 2 23 125 146 125 146 0.97
3 16 4.5e-05 0.003 18.1 0.5 1 23 152 174 152 174 0.95
4 16 2.6e-07 1.8e-05 25.1 1.9 1 23 180 202 180 202 0.98
5 16 0.00025 0.017 15.8 2.8 1 23 208 230 208 230 0.98
6 16 4.7e-07 3.2e-05 24.3 3.6 1 23 236 258 236 258 0.99
7 16 0.0029 0.2 12.4 1.5 1 23 264 286 264 286 0.98
8 16 0.0005 0.034 14.8 4.9 1 23 292 314 292 314 0.98
9 16 0.00062 0.042 14.5 2.7 1 23 320 342 320 342 0.98
10 16 0.1 6.9 7.5 0.9 1 23 348 370 348 370 0.97
11 16 4.9e-06 0.00033 21.1 5.0 1 23 376 398 376 398 0.98
12 16 0.0042 0.29 11.9 5.6 1 23 404 426 404 426 0.98
13 16 1.3e-08 8.7e-07 29.2 0.4 1 23 432 454 432 454 0.98
14 16 1.2e-05 0.00082 19.9 0.2 1 23 460 482 460 482 0.99
15 16 3.1e-06 0.00021 21.7 1.0 1 23 488 510 488 510 0.99
16 16 0.0026 0.18 12.5 5.5 1 23 516 538 516 538 0.98

Sequence Information

Coding Sequence
ATGGAAATAACAATCAAAGAAGAACAAATTGAAGATGCTACGTTGGAGTATTCCAAtagttacaattttagttttaattgtaaGGAAGATACGACAGATGAAGCTATTAAAGACGAACCTTGTTACGATATTGGTCtgattaaaatagaagaatcCGATCTAAAGGAATTTATTCGAGAAAGtgttaaaatcgaaaaattagaAGTAATTCAAGAAAACGGTGCAGAAACTAGTGAAGTATTATACTATTGTCATAATTGCGATTTTAACTGTTCTGAAAGACCAAATTTTATTACCCATCTACAGACTCACGTGCATGAAAATGTAACTAAGTCTCGACTGAATAACGATAAGAAACAGAAGAAAGCAAATTACTGCTCTATGTGCGAACACGAGTTTACcaatagagaaaatttaaaagaacacATGCTAATtcataaaagtgaaaaaccttttttatgtGTAATTTGCGGATACAGATCTTCACAAAAGTCTAGACTAAATGCACACATGTTGACTCACACGGGTGAAAAACCTTACCGATGTACCATTTGTGAATACAGCTTTAAGactaaaggaaatttaaaaaagcacacGTTAGTTCATACCGGTGAGAAACGCTTCCAATGTCCTTGTTGCGAAAAtcgattttctcaaaagtcCGGTTTGAAGTTGCACATGTTGACCCACACGGGTGAAAAACCTTATCAGTGTACAATCTGCAACCACAAGTTTTCCCAGAAGTCAAGTTTAAACTCGCACATATTGACTCACACAGGAGAAAAACGTTTCCACTGTACAATCTGCGAATTTAAATCTGCGCAGAAGTCTGGTTTAGATGCACACATGTTTACTCATACTGGTGAAAAACGTTTTCATTGTACAATTTGCAAATACAAGTCTTCTAATAAGTCGAGATTAAACTCTCACATGTTGACCCACTCGGGTGAAAAACGTTTTCAATGTACAATTTGtgaatacaaaagtaaacagAGGCAAACTATGAGGAAACACATGGTGACTCAtgcaggtgaaaaacctttccAATGTGCAAATTGCGAATACAAAAGTTGGGAAAAGTCGAAACTAAAATCACACATGGTCACccacacaggtgaaaaacctcaTCAGTGCACAATTTgccaacaaaaattttctcaaaggTCGAGTTTACGAAGTCACATGTTTACTCATACAGGCGAAAAGCGTTTCCATTGTACTTTGTGCGAATACAAGTCTTCACATAAGTCGAGCTTAAACACACACGTGCTGACTCACACACGCGAAAAACCGTTTCAGTGCACTATATGTGGATATACGTTCATAGACAAAAGCAACTTGCAGAGACATTTGGCAGTTCACACTGGTGTAAAACCTTACGAATGTAACATTTGCGAATACAAAGCCTCGCAAAAGTCTGGTTTAAACGTACACATGTTGACTCACACGGGTGAAAAGCGTTATCAATGCGATTTGTGCGAATCTAAATTTGCtcaaaaatcaactttaaccAAACATATGGCGACACATACAGGAAATAAGCCTTTTCAGTGTACGATATGTAAATATAAATCTTCGCGAAAATCGACTTTAAAGTGCCACATGCAGATTCATAAAGTTGTGCTGAACGCTACGAAATAG
Protein Sequence
MEITIKEEQIEDATLEYSNSYNFSFNCKEDTTDEAIKDEPCYDIGLIKIEESDLKEFIRESVKIEKLEVIQENGAETSEVLYYCHNCDFNCSERPNFITHLQTHVHENVTKSRLNNDKKQKKANYCSMCEHEFTNRENLKEHMLIHKSEKPFLCVICGYRSSQKSRLNAHMLTHTGEKPYRCTICEYSFKTKGNLKKHTLVHTGEKRFQCPCCENRFSQKSGLKLHMLTHTGEKPYQCTICNHKFSQKSSLNSHILTHTGEKRFHCTICEFKSAQKSGLDAHMFTHTGEKRFHCTICKYKSSNKSRLNSHMLTHSGEKRFQCTICEYKSKQRQTMRKHMVTHAGEKPFQCANCEYKSWEKSKLKSHMVTHTGEKPHQCTICQQKFSQRSSLRSHMFTHTGEKRFHCTLCEYKSSHKSSLNTHVLTHTREKPFQCTICGYTFIDKSNLQRHLAVHTGVKPYECNICEYKASQKSGLNVHMLTHTGEKRYQCDLCESKFAQKSTLTKHMATHTGNKPFQCTICKYKSSRKSTLKCHMQIHKVVLNATK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-