Mfla001516.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malthinus flaveolus
Gene Symbol
-
Assembly
GCA_950108345.1
Location
OX467285.1:21822897-21826471[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0003 0.02 15.5 4.9 2 23 184 205 183 205 0.97
2 16 8.8e-06 0.0006 20.3 7.1 1 23 210 232 210 233 0.96
3 16 0.00011 0.0077 16.8 5.0 1 23 238 260 238 260 0.97
4 16 0.00012 0.008 16.8 1.1 1 22 266 287 266 287 0.95
5 16 1.4e-05 0.00097 19.7 2.1 1 23 294 316 294 316 0.96
6 16 0.00093 0.063 14.0 0.1 1 23 494 516 494 516 0.95
7 16 1.9e-06 0.00013 22.4 6.0 1 23 522 544 522 544 0.96
8 16 5.5e-06 0.00037 21.0 6.2 1 23 550 572 550 572 0.98
9 16 5.8e-05 0.0039 17.7 0.8 1 23 578 601 578 601 0.95
10 16 0.0078 0.53 11.0 0.9 1 23 613 635 613 635 0.97
11 16 0.00036 0.025 15.2 4.8 1 23 641 663 641 663 0.98
12 16 2e-06 0.00014 22.4 0.5 1 23 670 692 670 692 0.96
13 16 4.1e-06 0.00028 21.4 1.0 1 23 698 720 698 720 0.98
14 16 3.8e-07 2.6e-05 24.6 0.9 3 23 728 748 726 748 0.96
15 16 6.5e-05 0.0044 17.6 0.1 1 23 754 776 754 776 0.99
16 16 0.24 16 6.4 0.5 1 23 781 804 781 804 0.96

Sequence Information

Coding Sequence
ATGGATAATCAACAATACGATCTCACCAAAATCTGCAGGGTGTGTAAAAGTGAATCAGATCGCATGAGTTCAGTTTTTAAAGATGACCAACAGAATGCTAATGGTCCCCGCATTGACGAGATGCTAATGGCATGTACATCTGTTTTGGTGAATACAGAAGACGGTTTACCCAATTTAATATGTCAAATATGTACAGAACAATTAAACAgtgcttataactttaaacaGCAATGCGAAACTACAGATACTGTTTTAAGAGAATACTTAAAAAGCACAAAAGATGAAGATCAAGAACCGgttaaagaagaaaatgagAACGTACAACCTAACGAAGTTCTTGCGGAGTCTAACGAAGTTGTTGGCGAGTCTAACGATTCGACCGTTATTAACGAAGAACAAGATAACGATTGTATTAACTTGATGTCGCCCGAAGTTGATAACACGTTAATAAACATGAAAAGTGAACCGGATGAGCTATTGGATGCGGCCGTAGATGATGGTACAAATATTgattacattcaatttttagaaaacaatcAAATGCTACTAACCTGTCGAACGTGCTCGAAGTGTTTTACAACCTTAGAAGGTTTAAAGTCACATAAACGGACACATTATAAAGGTATATTTAAGTGTAAAGAATGTAACAAGCAATACACCAGACAAAGTCATCTGCAACGTCACGAGTTATCGCATCATCGTCGAAAAGTGCAcgtttgtaaaatttgcaataagaCCCTAACGAGATTTGAACATCTAAAACGGCATTTAGTCACACATTTAAAAGAGAAACCTTACGCGTGTACTACTTGTAATCGTGGATTCAATAGAGCCGAGCATTTTCAAAATCATATTAAACGTTGCAAAGGTGTTTTTATGCATATTTGCAATATTTGTAATAGAGGATTTAATAGACAAGATAGTTTGGAAGTACATATGCATTTACACGACAATAAATTGCCAGTTTTGCCTACTCTCGATAATTTGGACAACATCGAAGAGCACTATGTTCAGATTGAATTGGACGGTATCGATAATGTGCCTGGGTATTCAGAATCGGACAGTGAAGTTGAACCAGAAACGAACACTGGACACACTGATTGTTTAGAAGTAAGTCTGACCGAAGGTGGTGAAGATGTTAATACTGATAGTATTCCACTTTCTCCCGAAGataCGCTGATGGAAGACGATAATGGTATATACGACGATTTAGAATCATATGATAATATAGAGGAAGATAAATCGACGGTAACCAAAGAATTGTATGATGAACAAACTAGTGACCAGTTTGATCTCAAAGATGAAAGAGCCGATTCGGATAGTGGTCACTCAGAATATTTGCCGAGTAAATCGTTAAGGGTGAAACGTAAACGTGGACGTCCGAGAAAAAATAGCACTAATAGATTGCGAGGACGGCCTTCtatttcaaaagtaaaaagtgaACCCGAGGATGAAGATCCGAACGAAGCCGAGGGAGAGTTCGCTTGTCCCATGtgtaacataattttcaataaaatgagcTTACTCGAGAAACATGCAGCGTCTCACGATGGCTTGAAAGTGCACGCTTGTacaatttgtaacaaaaagttttcccGAAGTAATCATTTAAAGAGACACATGTTGTCGCACTCTACGATTAAACCATTTTCTTGCGATATTTGTACCAAGTGTTTTAATAGAAGGGACCATTTGATGCAGCACATGAAACTACATGCAAAAACTCAAGATTTTGAATGTGACATATGTAAGAGACCATTTGGACGTGCCGATCACTTGGCAAAACACAAAGCGTCGAAACATAACATTGGCGAAAAAACTATGggtgaaaagaaatttcaatgcACTGTGTGCCTTAAAGGATTTACCACCGAAAAATACCGGGATATACATATGAAGGGTCATAATGGCGAAAAAACATTCCAATGTAGAACGTGcgataaaacttttctttctaAATCTCATCTAACTGAAcatattaaatttcacaacgatcattccaaaaaatttttatgttcaGAGTGTGGACAGAGGTTTATTCGAAACGATTACTTGGTAATTCACATGCGTAGGCATCGTggcgaaaaacctttcaaatgtcAATATTGCGGTAAAGGTTTTCCTAGGACTACCGATTTAACGGTCCACGAAAGGTATCACACTGGAGAAAAAACTCACTTATGTACAATATGTGGAAGAGGTTTTGGAAGagCTTACAATCTCACAGTTCACATGCGAACTCACACTGGAGAAAAACCTTATCAATGTACTTACTGTGAAGCAGCATTTGCTCAAGGAAACGATTTAAAAGCTCACGTGCGTCGACACACTGGGGAAAGATTTCAATGTGAATTTTGTCCCGAGAATTTCTTAATGGGCTATTTGTTGACTCAACATAAAAGATCTGTTcatggTATGAACGTAATAAGTAATATACGAAGACTTCAGCCTGTGATGAAGAAAGATCCCCATCTAGATTTAGATGATCCACCAATAACTATTGCATTACCGGCTCCCACTATTCCTGTGTACAATGCTGAACTTCAAGCTCAGTTAGCGGTGCAACAATTACAGCAACAAATAAATAGGCAGTGA
Protein Sequence
MDNQQYDLTKICRVCKSESDRMSSVFKDDQQNANGPRIDEMLMACTSVLVNTEDGLPNLICQICTEQLNSAYNFKQQCETTDTVLREYLKSTKDEDQEPVKEENENVQPNEVLAESNEVVGESNDSTVINEEQDNDCINLMSPEVDNTLINMKSEPDELLDAAVDDGTNIDYIQFLENNQMLLTCRTCSKCFTTLEGLKSHKRTHYKGIFKCKECNKQYTRQSHLQRHELSHHRRKVHVCKICNKTLTRFEHLKRHLVTHLKEKPYACTTCNRGFNRAEHFQNHIKRCKGVFMHICNICNRGFNRQDSLEVHMHLHDNKLPVLPTLDNLDNIEEHYVQIELDGIDNVPGYSESDSEVEPETNTGHTDCLEVSLTEGGEDVNTDSIPLSPEDTLMEDDNGIYDDLESYDNIEEDKSTVTKELYDEQTSDQFDLKDERADSDSGHSEYLPSKSLRVKRKRGRPRKNSTNRLRGRPSISKVKSEPEDEDPNEAEGEFACPMCNIIFNKMSLLEKHAASHDGLKVHACTICNKKFSRSNHLKRHMLSHSTIKPFSCDICTKCFNRRDHLMQHMKLHAKTQDFECDICKRPFGRADHLAKHKASKHNIGEKTMGEKKFQCTVCLKGFTTEKYRDIHMKGHNGEKTFQCRTCDKTFLSKSHLTEHIKFHNDHSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCQYCGKGFPRTTDLTVHERYHTGEKTHLCTICGRGFGRAYNLTVHMRTHTGEKPYQCTYCEAAFAQGNDLKAHVRRHTGERFQCEFCPENFLMGYLLTQHKRSVHGMNVISNIRRLQPVMKKDPHLDLDDPPITIALPAPTIPVYNAELQAQLAVQQLQQQINRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00951122;
90% Identity
-
80% Identity
-