Basic Information

Insect: Malthinus flaveolus
Gene Symbol: -
Assembly: GCA_950108345.1
Location: OX467288.1:718429-729966[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0063 0.43 11.3 2.0 1 23 92 114 92 114 0.99

2 23 0.00024 0.016 15.8 1.2 1 23 128 151 128 151 0.96

3 23 4.9e-06 0.00033 21.1 1.3 1 23 157 179 157 179 0.99

4 23 0.011 0.73 10.6 4.8 1 23 185 207 185 207 0.97

5 23 0.00029 0.02 15.6 7.5 1 23 213 235 213 235 0.98

6 23 0.00027 0.018 15.7 1.1 1 23 241 263 241 263 0.98

7 23 7.8e-05 0.0053 17.3 1.3 1 23 269 291 269 291 0.99

8 23 1.6e-06 0.00011 22.7 2.1 1 23 297 319 297 319 0.98

9 23 1.4e-05 0.00098 19.6 1.3 1 23 325 347 325 347 0.99

10 23 0.00012 0.0081 16.8 1.2 1 23 353 375 353 375 0.98

11 23 0.00015 0.01 16.4 1.6 2 23 382 403 381 403 0.97

12 23 0.0014 0.093 13.4 5.0 1 23 409 431 409 431 0.98

13 23 0.0025 0.17 12.6 5.6 1 23 437 459 437 459 0.98

14 23 6.8e-05 0.0046 17.5 1.0 1 23 465 487 465 487 0.98

15 23 0.0011 0.073 13.8 3.7 1 23 493 515 493 515 0.98

16 23 0.015 1 10.2 2.2 1 23 614 636 614 636 0.96

17 23 4e-06 0.00027 21.4 3.8 1 23 663 685 663 685 0.99

18 23 0.0085 0.58 10.9 4.2 1 23 691 713 691 713 0.98

19 23 0.0071 0.48 11.2 5.9 1 23 719 741 719 741 0.98

20 23 0.019 1.3 9.8 3.0 1 23 747 769 747 769 0.96

21 23 3.1e-05 0.0021 18.6 2.9 1 23 775 797 775 797 0.99

22 23 0.00016 0.011 16.3 3.9 1 23 803 825 803 825 0.98

23 23 2.7e-05 0.0018 18.8 4.8 1 23 831 853 831 853 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0063	0.43	11.3	2.0	1	23	92	114	92	114	0.99
2	23	0.00024	0.016	15.8	1.2	1	23	128	151	128	151	0.96
3	23	4.9e-06	0.00033	21.1	1.3	1	23	157	179	157	179	0.99
4	23	0.011	0.73	10.6	4.8	1	23	185	207	185	207	0.97
5	23	0.00029	0.02	15.6	7.5	1	23	213	235	213	235	0.98
6	23	0.00027	0.018	15.7	1.1	1	23	241	263	241	263	0.98
7	23	7.8e-05	0.0053	17.3	1.3	1	23	269	291	269	291	0.99
8	23	1.6e-06	0.00011	22.7	2.1	1	23	297	319	297	319	0.98
9	23	1.4e-05	0.00098	19.6	1.3	1	23	325	347	325	347	0.99
10	23	0.00012	0.0081	16.8	1.2	1	23	353	375	353	375	0.98
11	23	0.00015	0.01	16.4	1.6	2	23	382	403	381	403	0.97
12	23	0.0014	0.093	13.4	5.0	1	23	409	431	409	431	0.98
13	23	0.0025	0.17	12.6	5.6	1	23	437	459	437	459	0.98
14	23	6.8e-05	0.0046	17.5	1.0	1	23	465	487	465	487	0.98
15	23	0.0011	0.073	13.8	3.7	1	23	493	515	493	515	0.98
16	23	0.015	1	10.2	2.2	1	23	614	636	614	636	0.96
17	23	4e-06	0.00027	21.4	3.8	1	23	663	685	663	685	0.99
18	23	0.0085	0.58	10.9	4.2	1	23	691	713	691	713	0.98
19	23	0.0071	0.48	11.2	5.9	1	23	719	741	719	741	0.98
20	23	0.019	1.3	9.8	3.0	1	23	747	769	747	769	0.96
21	23	3.1e-05	0.0021	18.6	2.9	1	23	775	797	775	797	0.99
22	23	0.00016	0.011	16.3	3.9	1	23	803	825	803	825	0.98
23	23	2.7e-05	0.0018	18.8	4.8	1	23	831	853	831	853	0.99

Sequence Information

Coding Sequence: ATGGAAATAACTATCAAAGAAGAAGTTGAAGTTGCTACTTTCAACTATTTGGATAACCTTGACGCTTTAAATGAAGCTGTTAAAGAAGAATTTTCTTCCGATAATCTTTCGGACGTGGATAGAGCTGTTAAAGAAGAACCTTCTTATTATAACCTTTCGGATTTTGgCCCAATTAAAGTAGAAGTACGGGGCCTGGAGGAATCGATtcaagaaaatgttaaaatagaaaaagacgTACAACTCGTAAAATATAGTTCAGAAACCAACCAAGTGTACTACTGTTATAACTGCGATTTCAAGTGTTCTATAAAACCAAGTTTAATTGCTCACGTACGGACTCACGTAAATAATGCATGTACTGTAAGTGAGATAAAAGAACCTTACCGGTGTACTTTGTGTGAGTATAAGTTTTCTCTCGAGTCTACTTTACGGACACATATTATGTTAACTCATTCGAGCGAAAAGGCTTTTCAATGCACAATTTGCGAATACAAATTTGTGCTAAAGTCAGAATTAACGACTCACATGTCAACTCATAGTGGTGAAAAACCGTATCATTGTCCTACATGTGAATTCAAATGCAAGCGTCttgcctatttaaaagaccACATGTATATTCATACAGGAGAAAAACCGTACCAATGTTCAAAGTGTGATTACAAGTGTACACATCGTGGATACCTAAAAAAACACATGTTAAATCACACCGATGAAAAACCTTTTCCATGTACTTTATGCGACTATAAGTTTTCGCtcaagtcaattttaaaatcgcacATGTTAACTCACACAAACGAAAAACCGTTTCAGTGTACAATCTGCGATTATAAATCTTCGCTTaaagtaactttaaaaaatcacatGTTAACTCACACGGGCGATAAACCCTATCAGTGTTCAATATGTCAAtacaaattttcgaaaaaagtgaatttaaaaAGCCACATGTCGGTTCATACGGGTGAAAAACCATTTCAATGCTCCATTTGCCAATATAAGGCTTCAAGAAACTCAACTTTACAGTCGCACATGTTGACTCACACAGGTGTGAAACCTTTTAATTGCGAACTTTGCGATTATAAAACTTCGTTAAAGTCGAGTTTAAACTCGCACATGTTGACTCACACAGATGAGAAGTCGATTAAATGTAGCATGTGTGAGTATACGTGTACGCAAAAAGCGTACTTAAACAGACATCTAGCAGTTCACACGGGTGAAAAGCGTTTTAAGTGTACTCAATGTGAGTTTATGTGTACAAGAAAGTCTACTTTAGAAAATCATGTGTTTACTCACACGGGTGAGTACACTCATCGATGTTCGATTTGTGTGTACAAGTGTAAGGACAGTGAAACTTTAAAACGACACTTGTCGACACATGGTGATGAAAAAGCTTTTCCGTGTGGTGtgtgcgattttaaatttggttcTAAGAATAGTTTAAGAAAACATAGGTTAACTCATACTGACGAAAAACCATATCGATGTACTTTATGTGATTGTAAATATGCAAAGAAGGTTACATTAACAAAACACCTATTGAGTCATACAAATGCTACAATTAAAAAGGAACCTTTGTCTCTTAATGCTTTTGatTTAGATAAACTAGAAACGGAACACAAGGAGTTGAACGAAAAGGAGCCTTATATAATTAACTTCTGTGCCGTTGattcaattaaaatggaaGAGGACTGCAGTGAAGAAGAACCCAGTGTCTTAAACTTTTGTGGCATCGatTCGTACAAAATAGAGAAAGATGAGCTTGAAGAATTGAGTTTGGAAAATCTCAAAGGAGAATACAATGAAAAGATCTTAACAAATAATGTAGAAGCAAAAGAAGTGTATTTGTGTTACCAATGCAATTATCGCTGTATTAAAAAACCTAGTTTAGTTACTCATATGCAAATACATACGAGTAGAAATGTTCACAAGTGCAAAACAAGAGGGAACGATGTGGAAGAAGGTAATGTGAGAAAACTACAAATAGTTTATCGATGCACCACTTGCAAATATAAATCTTCGCGCAAGTCCAACTTAAACACACACATGCGGGTACACACGGGTGAAAAACCACACGTATGTACGATGTGCGAGTACAAATGTTCGATTAAATCGAGTTTATATAACCACATTTTGACAcatactggtgaaaaaccttttcagtGTTATCTATGTACATATAAATGCTCACTCAAATCGAGCTTAAAGAAACATCTATTAAGGCATACCGGTGAAAAAACCTTCCAATGTAATATGTGTGATTACAAATCGTTACATAAGTCTGATTTAAATCAACACACGAGtgtacacactggtgaaaagccatATCAATGTGTTTTGTGCGATTACAAATGTTCGCGTAATGCAACTTTGAAACAGCACATGTTAACTCACACCGGCGAGAAACCTTTTGAGTGCACAATATGTGAGTATAAATGTTCGCTTAAAACAAACTTGAATAAACACATGTTGAAACACACTGACGAAAAGCCGTATCGGTGTACTATTTGTGAGTACAAAAGTTCGCGAAAATCGTGTTTAAACCGGCACATGTTGACACATTCGAAGAAAGAACCTCTCAAATGTACTTGA
Protein Sequence: MEITIKEEVEVATFNYLDNLDALNEAVKEEFSSDNLSDVDRAVKEEPSYYNLSDFGPIKVEVRGLEESIQENVKIEKDVQLVKYSSETNQVYYCYNCDFKCSIKPSLIAHVRTHVNNACTVSEIKEPYRCTLCEYKFSLESTLRTHIMLTHSSEKAFQCTICEYKFVLKSELTTHMSTHSGEKPYHCPTCEFKCKRLAYLKDHMYIHTGEKPYQCSKCDYKCTHRGYLKKHMLNHTDEKPFPCTLCDYKFSLKSILKSHMLTHTNEKPFQCTICDYKSSLKVTLKNHMLTHTGDKPYQCSICQYKFSKKVNLKSHMSVHTGEKPFQCSICQYKASRNSTLQSHMLTHTGVKPFNCELCDYKTSLKSSLNSHMLTHTDEKSIKCSMCEYTCTQKAYLNRHLAVHTGEKRFKCTQCEFMCTRKSTLENHVFTHTGEYTHRCSICVYKCKDSETLKRHLSTHGDEKAFPCGVCDFKFGSKNSLRKHRLTHTDEKPYRCTLCDCKYAKKVTLTKHLLSHTNATIKKEPLSLNAFDLDKLETEHKELNEKEPYIINFCAVDSIKMEEDCSEEEPSVLNFCGIDSYKIEKDELEELSLENLKGEYNEKILTNNVEAKEVYLCYQCNYRCIKKPSLVTHMQIHTSRNVHKCKTRGNDVEEGNVRKLQIVYRCTTCKYKSSRKSNLNTHMRVHTGEKPHVCTMCEYKCSIKSSLYNHILTHTGEKPFQCYLCTYKCSLKSSLKKHLLRHTGEKTFQCNMCDYKSLHKSDLNQHTSVHTGEKPYQCVLCDYKCSRNATLKQHMLTHTGEKPFECTICEYKCSLKTNLNKHMLKHTDEKPYRCTICEYKSSRKSCLNRHMLTHSKKEPLKCT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -