Mfla012876.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malthinus flaveolus
Gene Symbol
-
Assembly
GCA_950108345.1
Location
OX467288.1:735096-737434[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.0001 0.007 17.0 2.7 1 23 82 104 82 104 0.98
2 23 2.2e-05 0.0015 19.1 2.3 1 23 131 153 131 153 0.99
3 23 0.03 2.1 9.2 5.7 1 23 159 181 159 181 0.97
4 23 5.3e-06 0.00036 21.0 2.3 1 23 187 209 187 209 0.98
5 23 0.019 1.3 9.9 2.2 1 23 215 237 215 237 0.97
6 23 0.0002 0.014 16.1 5.9 1 23 243 265 243 265 0.97
7 23 0.0049 0.33 11.7 7.1 1 23 271 293 271 293 0.97
8 23 0.002 0.13 12.9 5.4 1 23 299 321 299 321 0.97
9 23 7.8e-05 0.0053 17.3 3.8 1 23 327 349 327 349 0.98
10 23 2.5e-06 0.00017 22.0 1.4 1 23 355 377 355 377 0.98
11 23 0.0002 0.014 16.0 6.9 1 23 383 405 383 405 0.98
12 23 0.00018 0.012 16.2 3.4 1 23 411 433 411 433 0.99
13 23 1.4e-06 9.3e-05 22.9 1.0 1 23 439 461 439 461 0.98
14 23 0.00063 0.043 14.5 6.5 1 23 467 489 467 489 0.98
15 23 0.00016 0.011 16.3 3.8 1 23 495 517 495 517 0.98
16 23 5.4e-05 0.0037 17.8 2.2 1 23 523 545 523 545 0.98
17 23 0.00012 0.0083 16.7 2.1 1 23 551 573 551 573 0.98
18 23 0.0023 0.16 12.7 6.0 1 23 579 601 579 601 0.99
19 23 0.005 0.34 11.7 5.0 1 23 607 629 607 629 0.98
20 23 1.2e-05 0.00084 19.9 1.0 1 23 635 657 635 657 0.99
21 23 1.8e-06 0.00012 22.5 1.7 1 23 663 685 663 685 0.98
22 23 0.0011 0.076 13.7 4.2 1 23 691 713 691 713 0.98
23 23 0.013 0.87 10.4 6.9 1 23 719 741 719 741 0.97

Sequence Information

Coding Sequence
AtggaaacaaaaatcaaagaagAACCGATCCAAGATGAGGATAGTCTTTTTGAGTATTCCAATCATAGTTTCCGCAACTTTAATGTAAAGATTAAGGAAGAATCTTCTAACGAGAATTGTTCTGATATAGgtttaattaaaatagaagaaagtCACTTGAAGGAATCGATCGAAGAAGTAAACATCAAAAGCGAATatgaagaaataatttttaatcccAATTTACAAACGGAAGAAGAAGTTTATTACTGTTACGATTGTGGTTACAAGTGTTCGAAAAAACTAAGCTTAATTATTCATATGCGAATTCATAGTAATAAAAGTGTGTACGTGACTAATGCGAATGGAGATCGGGTAGAAGAAGgcaattcaaaaaaatttgaagtaacgTACGAATGTTCAATATGCGAATATAAATCGATTTATAAATCCCATTTAAACACTCACATGAGAATACACACTGGCAAAAAGACATTTCAATGTAGTCTGTGCGAGTACAAGTGTGTGGATAAGTCACGACTCAATAAACACAAGTTCAAACATACAGGAGAAAAGCCATTTCAGTGTTTCATAtgcaaatacaatttttcgctaaaatCGAGTTTAAACAAACACATGATGATTCATCGAGGTGAAAAGCCTTTCCAGTGTACTATGTGCGAATACAGAAGCTTACTCAGAtcgactttaaaaaaacatatgtTGACTCACACCGGTGAGAAACCTTTTCACTGCCTCATGTGCGATTATAAGTGTACTCAAAAGTCTAGTTTAAACAAACACATGTTAATCCACAcgggtgaaaaacctttcCAGTGTATTATCTGTGACCACAAATGTTCGCTTAAGTCACATTTAAACAGACACATGTTAACGCACACATCAATTAAATCTTTCCACTGCACTACGTGCGAATACAAATGTTCAATTAAGTCGGATTTACGCAGACACATGTTAATTCACACGGGCGAAAAACCTTTCGAGTGTTCCGTGTGTAAATACAGGTGTTCAATGAAATCGAGTTTAAACCAGCACATGTTGACTCATACTGGTGAGAAGCCGTTTCAGTGCACCATATGTAAATACAAGTTTTCCCTAAAGGCAAGTTTAAACAGACACATGTTGATTCATACGGGCGAAAAACCGTTTCAGTGTTCTAAATGCGTATGcaaattttcgacaaaatcAAGTTTAAAGAAGCATTTGTTTACGCATACGGGTGAGAAGCCTTTCCAGTGTAAACTTTGCCCATACAAATGTTCGCTCAAATCTACGTTGAACCAGCACATTTTGActcatacaggtgaaaaaccgtTTCAGTGCACTTTGTGTGGTTACAAATATTCTAAGAAAGCAAATTTGAACATGCATATGATGATTCACACAGGCGAAAAACCTTTCTGCTGTTCTATTTGTGATTACAAATGTTCGCTTAAGTCGTATTTAAGCAGACACATGTTGACACATTCGGCCGAACGTTGTTTTCATTGCAGTATGTGCGAGTATAAATCTTCGGAAAGgtctaatttaaacaaacacatGATGACCCACACCGGTGATAAACCGTTTCAATGTAGTATGTGCGACTATGCATGTTCGATGAAGTCCAGTTTAAAGAAACACGTGTTAATTCATACAGGGGAGAAACCGTTTCAGTGTAGTTTGTGTGATTATAAGTGTTCACTATTATCTGGTTTAAAGAGACACATGTTGATTCATACCGAAGAAAAGCCGTTTCAGTGCTCACTGTGCGAATATAAATGTTGTCAGAAAGGGAGTTTCAACATTCACATGTTGACGCATACgggcgaaaaacctttttcgTGTTCGCTATGTCAGTATAAGTGTTCTCTGAAGTCCAGTTTTAACAATCACATGTTATCTCATACAAATGAAAAGCCTTTCCAGTGTAGTGTGTGCGAACTTAAATATTCCATAAAATCGAGTTTAAATAGGCACATGTTGACTCACACTGAAGGGAAGCAGTTTCCTTGTACTTCGTgcgattataaattttctcaaaaatcgaGTTTAAGTCGACACATGGTGACACACACGGATGAAAAGCCTTTCCAGTGTATgctatgtgattataaatgttcgttgaaaacaaatttgaacaaacaCATGTTTGTTCATACGACCGATAAACCTTTTCAATGTATTCattgtgattataaatgtacGCAGAAATCGAGATTGAAGAGACACGTTTTAACTCATACTAGTTAG
Protein Sequence
METKIKEEPIQDEDSLFEYSNHSFRNFNVKIKEESSNENCSDIGLIKIEESHLKESIEEVNIKSEYEEIIFNPNLQTEEEVYYCYDCGYKCSKKLSLIIHMRIHSNKSVYVTNANGDRVEEGNSKKFEVTYECSICEYKSIYKSHLNTHMRIHTGKKTFQCSLCEYKCVDKSRLNKHKFKHTGEKPFQCFICKYNFSLKSSLNKHMMIHRGEKPFQCTMCEYRSLLRSTLKKHMLTHTGEKPFHCLMCDYKCTQKSSLNKHMLIHTGEKPFQCIICDHKCSLKSHLNRHMLTHTSIKSFHCTTCEYKCSIKSDLRRHMLIHTGEKPFECSVCKYRCSMKSSLNQHMLTHTGEKPFQCTICKYKFSLKASLNRHMLIHTGEKPFQCSKCVCKFSTKSSLKKHLFTHTGEKPFQCKLCPYKCSLKSTLNQHILTHTGEKPFQCTLCGYKYSKKANLNMHMMIHTGEKPFCCSICDYKCSLKSYLSRHMLTHSAERCFHCSMCEYKSSERSNLNKHMMTHTGDKPFQCSMCDYACSMKSSLKKHVLIHTGEKPFQCSLCDYKCSLLSGLKRHMLIHTEEKPFQCSLCEYKCCQKGSFNIHMLTHTGEKPFSCSLCQYKCSLKSSFNNHMLSHTNEKPFQCSVCELKYSIKSSLNRHMLTHTEGKQFPCTSCDYKFSQKSSLSRHMVTHTDEKPFQCMLCDYKCSLKTNLNKHMFVHTTDKPFQCIHCDYKCTQKSRLKRHVLTHTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-