Basic Information

Insect: Malthinus flaveolus
Gene Symbol: -
Assembly: GCA_950108345.1
Location: OX467288.1:20262015-20265521[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00016 0.011 16.3 2.4 1 23 391 413 391 413 0.96

2 18 7.1e-05 0.0048 17.5 1.3 1 20 419 438 419 441 0.94

3 18 1.7e-05 0.0012 19.4 0.8 1 23 447 469 447 469 0.98

4 18 0.00032 0.021 15.4 4.4 1 21 475 495 475 497 0.95

5 18 3e-05 0.002 18.7 4.6 1 23 503 525 503 525 0.99

6 18 2.8e-05 0.0019 18.7 5.3 1 23 531 553 531 553 0.97

7 18 4.8e-06 0.00032 21.2 7.2 1 23 559 581 559 581 0.97

8 18 1.1e-07 7.5e-06 26.3 2.7 1 23 587 609 587 609 0.98

9 18 8.1e-05 0.0055 17.3 6.7 1 23 615 637 615 637 0.97

10 18 7.5e-05 0.0051 17.4 4.7 1 23 643 665 643 665 0.97

11 18 5.2e-07 3.6e-05 24.2 2.8 1 23 671 693 671 693 0.98

12 18 7.4e-06 0.0005 20.6 7.9 1 23 699 721 699 721 0.98

13 18 5.3e-07 3.6e-05 24.2 5.5 1 23 727 749 727 749 0.98

14 18 1.9e-05 0.0013 19.3 7.7 1 23 755 777 755 777 0.98

15 18 1.2e-05 0.00084 19.9 7.1 1 23 783 805 783 805 0.97

16 18 0.00011 0.0072 16.9 0.4 1 23 811 833 811 833 0.98

17 18 0.029 2 9.3 5.1 1 23 843 865 843 865 0.98

18 18 7.8e-07 5.3e-05 23.6 0.9 1 23 871 893 871 893 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00016	0.011	16.3	2.4	1	23	391	413	391	413	0.96
2	18	7.1e-05	0.0048	17.5	1.3	1	20	419	438	419	441	0.94
3	18	1.7e-05	0.0012	19.4	0.8	1	23	447	469	447	469	0.98
4	18	0.00032	0.021	15.4	4.4	1	21	475	495	475	497	0.95
5	18	3e-05	0.002	18.7	4.6	1	23	503	525	503	525	0.99
6	18	2.8e-05	0.0019	18.7	5.3	1	23	531	553	531	553	0.97
7	18	4.8e-06	0.00032	21.2	7.2	1	23	559	581	559	581	0.97
8	18	1.1e-07	7.5e-06	26.3	2.7	1	23	587	609	587	609	0.98
9	18	8.1e-05	0.0055	17.3	6.7	1	23	615	637	615	637	0.97
10	18	7.5e-05	0.0051	17.4	4.7	1	23	643	665	643	665	0.97
11	18	5.2e-07	3.6e-05	24.2	2.8	1	23	671	693	671	693	0.98
12	18	7.4e-06	0.0005	20.6	7.9	1	23	699	721	699	721	0.98
13	18	5.3e-07	3.6e-05	24.2	5.5	1	23	727	749	727	749	0.98
14	18	1.9e-05	0.0013	19.3	7.7	1	23	755	777	755	777	0.98
15	18	1.2e-05	0.00084	19.9	7.1	1	23	783	805	783	805	0.97
16	18	0.00011	0.0072	16.9	0.4	1	23	811	833	811	833	0.98
17	18	0.029	2	9.3	5.1	1	23	843	865	843	865	0.98
18	18	7.8e-07	5.3e-05	23.6	0.9	1	23	871	893	871	893	0.96

Sequence Information

Coding Sequence: aTGAATTCGAACGAACAAAACCATCTCAACGGCGCTCCGTCAGAAAATTCTGAAGGTTCGTCGCAAAAATCTTCGGCCATCACTATACCGACGGATTTGAGAGTTAACACGACGCCATTAAATCAAGTCGCTTTGAGTAGTGTGGCTAAATATTGGGTTCTTACCAATTTCCTTCCGGGACCAATTTCACAAGTATCGGAAGCAATGCTGAGCCAACATGCCGGCATTCTCTCAACAGATCCGCTTCTTCTACAACAGCACACACAAATACCTGTCAGTATTTCGACATCTCAGGCACTCACAAATTTAGCCATTCCTGCAAGTGCGATGCATTTGGAAAACCCGACAAACCAAACTTTATCGAATCACCAGCAGTCGGAAGGACAAACTATAGTGTCGCAAGCTCAAACTCAACTAACGCATAGTCAGATGCACAATGCGCAACACAATCACAACCAGCAGTCGCAACAAAATATGGTGCAAGACAACTTGGTGTCGGTTATCGAAGATAGTAAAGATCACAAAGACTTGATCGCTTCGCAAATAGCGCAAGCTCAAATTCAGTTGGCCGAAAGTCAACAACAATTAAATCAACAAACACTAACGGTGCAACAATTGCAGCAGTTGCAAGTGCAGCAAGTATTGGATAATGTTGTGAGGATGGAAAGTGCAGTCGATAACGAAGGCCAACGTAACACGGATCAAGATTCTTTAGGCAACACGGACGGCATACAAATTGTAAAAGATGAAAAgaatttgcaaaattgttCCAAACTCCTTTCTGGAGCACAGTTCGGTTTGCAAGACATCAAGACTAATTTAATAGATGTACGAAGTCCCGACGGGAGCATAGTTAAGATTTCTGCCGGAATTCAAGACCAAGACTTAGCGAAAAGTTTAGGTATCGAAATGGTTCAAAATATGTACAAGGTGAACGTCGAAGAAATAAATCAACTGCTCGCTTATCACGAGGTGTTTGGTAAAATACAAGGCGAGCTATCGAGCGGGCAAACTAATGTAACTACGAACaacacaaatattaatttacaacagACTACTAATGCGATTGCTGGTAATATTCACATAGTTACGCCTAAGACTCTTGTCGAAAACGAACAAGAGCCGACTAGTTCAACCACGGGTGAGACGCCCGTGATTGCGACTGGGAATCATATTTGTGATTTGTGTGGTAAAATGTTTCAGTTTCGTTATCAATTAATAGTGCATAGACGTTACCATATCGAAAGGAAACCATTCACATGCCAAGTTTGCGGTAAGGCGTTTATAAATGCTCAAGAATTAACCAGACACGGTAAATGTCATCTTGGCGGTAGTATGTTTACTTGTGCCGTGTGTTTTCACGTTTTTGCAAACGCCGCGTCGCTCGAACGCCACATGAAACGCCATTCTACGGATAAGCCTTACAATTGCACTACTTGCGGTAAAGCTTTTGCTAGGAAAGAACATTTAGATAATCATACGAGGTGCCATACGGGAGAGACTCCATATAGATGTCAGTATTGTGCTAAAACTTTTACCAGAAAGGAGCATATGGTTAATCACGTTCGTAAACATACAGgtGAGACGCCACATAGATGTGAAATTTGCAAGAAATCGTTTACAAGAAAGGAACACTTTATGAATCACGTCATGTGGCATACTGGCGAAACGCCGCATCATTGTACAATTTGtggtaaaaaatatacgagaaAAGAACATTTAGCAAATCATATGAGATCCCACACAAACGATACTCCATTTAGGTGCGAAATTTGCGGTAAATCGTTCACCAGAAAAGAGCACTTTACAAACCATATTATGTGGCATACAGGCGAAACACCTCATCGATGCGATTTCTGTTCTAAAACGTTTACAAGAAAAGAACATTTACTTAATCACGTTCGGCAACACACCGGCGAGTCTCCTCACAGGTGTGTTTACTGTGCAAAGTCGTTTACTCGAAAAGAACACCTGGTGAACCACGTGAGACAACATACAGGAGAAACGCCATTTCGTTGTAGCTATTGCCCAAAAGCTTTCACAAGAAAAGACCATTTAGTGAATCACGTACGCCAACATACCGGGGAATCCCCTCACAAATGCACCTATTGCACTAAGTCTTTCACGAGAAAAGAGCATTTAACGAATCACGTTAGACAACACACTGGCGAATCACCGCATCGATGTCCGTATTGCTCAAAATCTTTCACAAGGAAGGAACATCTTACAAATCACGTTCGAATTCATACAGGCGAATCTCCGCATCGTTgcgaattttgtcaaaaaaccTTCACTAGAAAGGAACACCTTACAAACCATCTAAGACAACACACCGGAGAAACGCCTCACTGTTGTAACGTTTGTTCGAAGCCATTTACTAGGAAGGAACATTTGATAAACCACATGCGATCACATACTGGAGAGCGCCCGTTCTCTTGTGGGGAGTGTGGGAAGTCTTTTCCTCTCAAAGGCAACTTACTCTTCCATCAGCGCTCTCACAATAAAGGAGCCGACGCGGATCGTCCTTTTAGATGCGATTTGTGCGACAAAGACTTCATGTGCAAAGGCCACTTGGTGTCCCATAGAAGATCTCACAGTGGGGAAAGACCGCACGCTTGTCCAGATTGTGGAAAGACGTTTGTCGAAAAAGGTAACATGTTGCGCCACTTACGTAAACACGCCATGGAAAATGGAACTCAGTCGACCCCAAATCAAGTTTCAAATCAGGTAGCGCAAGTTGTAGCTCAAGTTGCCGCAAATCAGACGGTTCAATCGCAACCGACCATCACGCCTGTTCAAACGTCCGTTTCGACAACAATACAAATCCCACAAGTTAGTCAAAGTCAAACTTCGACCGACAATATAATAACGACAGGTAATATCGTGCAACAAACACAACATTTGCCTATTCATCAACAAACAAATCATTCTGTAGTAGTTCCTACTGCAAATAGTAATATTTTAGCTTCGTATTCATAA
Protein Sequence: MNSNEQNHLNGAPSENSEGSSQKSSAITIPTDLRVNTTPLNQVALSSVAKYWVLTNFLPGPISQVSEAMLSQHAGILSTDPLLLQQHTQIPVSISTSQALTNLAIPASAMHLENPTNQTLSNHQQSEGQTIVSQAQTQLTHSQMHNAQHNHNQQSQQNMVQDNLVSVIEDSKDHKDLIASQIAQAQIQLAESQQQLNQQTLTVQQLQQLQVQQVLDNVVRMESAVDNEGQRNTDQDSLGNTDGIQIVKDEKNLQNCSKLLSGAQFGLQDIKTNLIDVRSPDGSIVKISAGIQDQDLAKSLGIEMVQNMYKVNVEEINQLLAYHEVFGKIQGELSSGQTNVTTNNTNINLQQTTNAIAGNIHIVTPKTLVENEQEPTSSTTGETPVIATGNHICDLCGKMFQFRYQLIVHRRYHIERKPFTCQVCGKAFINAQELTRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYNCTTCGKAFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCVYCAKSFTRKEHLVNHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCPYCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFSCGECGKSFPLKGNLLFHQRSHNKGADADRPFRCDLCDKDFMCKGHLVSHRRSHSGERPHACPDCGKTFVEKGNMLRHLRKHAMENGTQSTPNQVSNQVAQVVAQVAANQTVQSQPTITPVQTSVSTTIQIPQVSQSQTSTDNIITTGNIVQQTQHLPIHQQTNHSVVVPTANSNILASYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00951115;
90% Identity: iTF_00951115;
80% Identity: -