Mfla016424.2
Basic Information
- Insect
- Malthinus flaveolus
- Gene Symbol
- -
- Assembly
- GCA_950108345.1
- Location
- OX467289.1:10897496-10899117[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-07 0.00011 22.1 0.0 5 38 22 54 20 58 0.91 2 2 2.6 8.9e+02 -0.1 0.1 27 37 108 118 108 126 0.72
Sequence Information
- Coding Sequence
- ATGCCCCGAACATATCAGCATGATCCCCGAAGTAAGACTTATACTAAACACCCTCAGAAATCGATAGATAAAGCTTTAGAAGATATTACCAATGGGATATCCTACAGAGCAGCCAGTAACAAATATGGAATACATTATTCCATCCTCTATCGACATCATAAAAATCCTGGAATAAGGAAACATGGGGGACAAACTTGTTTAACTttggaagaagaaaatttaattgtacatCAAATCATTGTATGTGCTGAACGGGGATACCCTATGGACCACCTAGATCTGAGaatgattattaaaaactcCTTGGATAGTCGAGGAAAAAATATCCCAAaGACATCTCTAAGAACAAGGATTTGTCAAAACATTAAAAGATCTAGAGCCGAAGTAACTCCAGAAGTAATCAGCGCTTACTTTGACAATCttcaaaacgaattaaaagaCGTCCCACCATGTAACATAATCAACTACGATGAAACTAATCTTAGTGATGATCCaggaagaaagaaaattattgccAAACGTGGATGTAGATATCCTGAAAGAATAATGAATTCATCCAAAACTAGCACATCAGTAATGTTTGCGGCATCAGCAGATGGAAAAGTCTTACCCCCATATGTTGATTGGGTAGAGAAAATTGCCGTACCTGCACTAAAAGATCTACCTGGTAAGAAGGTTCTGATTGGCGATAATTTATCGTCTCATTTTCTGAAAGAAACGGTTTCACTTTGTCAACATCATGGAAttgtattcatttttttaccacCCAATTCTACTCACATGACGCAACCCTTGGATGTGGCTTTCTTCCGCCCTCTAAAAGCTGCTTGGCGGAAAGTTTTAGAGAAGTGGAAAATGAGAGAAGGGAAAAGAGCCGCCAGCATTCCAAAAGACAAGTTCCCAATTATGTTGAAAGAGCTTATGCTAAACATTGAAGAGAATAAAGTCGCCAATGTTAAATCTGGATTTAGGAAGTGTGGCATCTGGCCAATCAATCGGAATGAAGTATTAAATCGCCTCCCTAAGACTCCTGTCACAGCAGAAGACAGAGAAGCAGAAGGACATGTCAGCAATGCAGTACTAGAAGTGTTGCAGGAACTAAGATATTCAGCACCCACTACACAAAAGAAAAGACGTAAACGAATCAATGTGCCTGCTGGAAAAAGCGTGGTAGGAACTGACTTTCAAATTGAAGAAGAGCAAGAGGCCGATGTCGTCTCGAATGACGGGAATGAATTAGAAGATGATCACATGGAACCTGAAATCGCAAATACCGAATATGAAAATGCGGAAAGATTGGAAAATGAGGTAGAATCAGAAAGCGACGATGAAGAAAATGACATGCCGCTCGCCCTTTTGAAGAATAAGACAGGGGTAGAGCTATATACAAAGGCAGAATGTTTGATAATGTATTTCCAATTGCGTATGATTCTATCGCAGAAGGTATGTGGCTCCTTGTAG
- Protein Sequence
- MPRTYQHDPRSKTYTKHPQKSIDKALEDITNGISYRAASNKYGIHYSILYRHHKNPGIRKHGGQTCLTLEEENLIVHQIIVCAERGYPMDHLDLRMIIKNSLDSRGKNIPKTSLRTRICQNIKRSRAEVTPEVISAYFDNLQNELKDVPPCNIINYDETNLSDDPGRKKIIAKRGCRYPERIMNSSKTSTSVMFAASADGKVLPPYVDWVEKIAVPALKDLPGKKVLIGDNLSSHFLKETVSLCQHHGIVFIFLPPNSTHMTQPLDVAFFRPLKAAWRKVLEKWKMREGKRAASIPKDKFPIMLKELMLNIEENKVANVKSGFRKCGIWPINRNEVLNRLPKTPVTAEDREAEGHVSNAVLEVLQELRYSAPTTQKKRRKRINVPAGKSVVGTDFQIEEEQEADVVSNDGNELEDDHMEPEIANTEYENAERLENEVESESDDEENDMPLALLKNKTGVELYTKAECLIMYFQLRMILSQKVCGSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -