Mfla002797.1
Basic Information
- Insect
- Malthinus flaveolus
- Gene Symbol
- -
- Assembly
- GCA_950108345.1
- Location
- OX467285.1:40429984-40431087[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-10 7.7e-08 32.1 0.0 1 34 18 51 18 57 0.94 2 2 5.9 2e+03 -1.2 0.0 14 23 146 154 141 155 0.78
Sequence Information
- Coding Sequence
- atGCCACGAAAAGCAGGACGCCAGtcttgtaataataaaagaaagcaATACAAAGAAGAGGACATGGCTAGGGCCATCAAGGCAGTTAGAGAAAAAACAATGGGATATCTCAAAGCATCTAAAACCTATAAAGTTCCCCGTACAACGCTTTTTCGTCTGAGTCAGATTAACACAGTTCCGCCACATAAGGCTGCAGCAACCAAGCTTggaagaaaatgtatttttacatCAGAGCTAGAGGATCTACTAGTtgattatattttcaaaatggagTCCAAATTTTACGGGCTCACAATGACAGATCTGAGGCGCATGGCTTATCAGTTGGCCATAAGGAATAAAATCAAACACCCGTTTTCTACATCTGGATTAGCAGGCAGAGCCTGgattgatttgtttttaaagcgACATCCAACACTGTCAATAAGGAAGCCAACGGGGACATCATTTGCAAGAGCTGCAggtttttgtaaagaaagaGTGGCCGGCTTTTTTGACCTCCTTGAAAAACAAATGCCTTATTCTCCGAACAACATTTATAATGTAGACAAATCAGGCTTAACGATTGTCCAAACTAAAGTACCGTCAGTAATAGGGCTTAAAGGCAAACGTCAAGTTGCTTCATTAACATCAGCAGAGAGAGGGGCTCTGTTTacagttattttttgtatgaGTGCGGCTGGAAACGTTGTGCCTCCCTTGGTTATTTTTCCAAGGAAAAATATGAACATTCAGCTTATGAAGGGAGCTCCTCCTGGGTCCGTAGGAGTTACTCATCCATCCGGTTGGGTGCAGTCCCATATTTTCACCCAGTGGTTTCGTCACTTTATCCAGTACACTAAACCAAGTCAAGAAAACCCTCTCCTGTTAATCCTTGACGGCCATTATAGCCACACTCACAATATCGACGTTATTGACCTTGCGAGGGAAAACCATGTTATCATTTTATGTCTGCCTCCTCACTCAACTCACAAGCTCCAGCCCTTGGACAAGTCATTTATGGGACCATTAAAAGTATATTATAGTGAAGAAATTCGTATTTGGATCCGTCAAAACCAACGGGCTCTTAGTCCTTTTGATATACCTAATGGAATTATTTGGTAG
- Protein Sequence
- MPRKAGRQSCNNKRKQYKEEDMARAIKAVREKTMGYLKASKTYKVPRTTLFRLSQINTVPPHKAAATKLGRKCIFTSELEDLLVDYIFKMESKFYGLTMTDLRRMAYQLAIRNKIKHPFSTSGLAGRAWIDLFLKRHPTLSIRKPTGTSFARAAGFCKERVAGFFDLLEKQMPYSPNNIYNVDKSGLTIVQTKVPSVIGLKGKRQVASLTSAERGALFTVIFCMSAAGNVVPPLVIFPRKNMNIQLMKGAPPGSVGVTHPSGWVQSHIFTQWFRHFIQYTKPSQENPLLLILDGHYSHTHNIDVIDLARENHVIILCLPPHSTHKLQPLDKSFMGPLKVYYSEEIRIWIRQNQRALSPFDIPNGIIW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -