Mfla004647.1
Basic Information
- Insect
- Malthinus flaveolus
- Gene Symbol
- -
- Assembly
- GCA_950108345.1
- Location
- OX467285.1:57987854-57996973[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-11 5.4e-09 35.8 0.1 2 40 19 57 18 61 0.91 2 2 6.3 2.1e+03 -1.3 0.0 27 45 344 362 339 362 0.85
Sequence Information
- Coding Sequence
- ATGGTACGCGAGTATAAAAGAAAACCAGGAACTCGCCAATACGTAAATTACACATCAGAACAACTAGACGAGGCTTTGCAGAAAGTTGCAGAAGGTAGTTTATCTATGAGAGCAGCGGCGAAGCAATATAAAATTCCATTTAGTACTATTAATAACCGATATCACGGACGACATGTTAAAACTGTCGGCGGTCAAAGTGTTTTTACTAAAGCGGAAGAGGTGGCACTTTTAAACTCAGTTGCACAATGTTCGGATTGGGGCTTTCCTCTCACTACGTTAGAAATGCGGATGTTTGCAAAAGCATATTTAGACAAACAAGGTCGTAGtgcttttcaatttgaaaataatttaccgGGAAAGGACTGGGTGTACGGGTTATTAAAACcgAGGGCAGCCGTGTCTAGGGATACAATTACCACATATTTTCATAACTTAGAAAACACACTGAGAGATGTGCCTgctcaaaatatatttaattacgaCGAAACGAACGTAAGCGATGATCCAGGTAAAGTAAAAGGAATTTACAGACGTGGTGTTAAATACCccgaaaaaattgcaaatcaTTCGAAAAGTGCTACTACAATTATGGTGTGTGGGTCAGATGACGGGACTTTACTACCTCTGTACGTCATTTACAAAAGTGAGCATCTTTATAACACATGGAAAGAAAACGGACCAAAAGGAAATCCATGTTGTACCAAACCATGCTGTGCCCAAGGATGCCGATTTAATCGTACATCACATGGTTGGATGGATTCAAATACTTTTCACGACTGGTTTGAAAGTACTTTTCTACCTCATGCAAGACGCTTGGAAGGGAAAAAAGTCTTAATAGGGGACAATCTAGCATCGCATTTCAACGATGCAGTCATCAGGTTGTgtgaagaaaataatatcGCATTTGTGTGTCTGGTTGCTAATTCTACACACATCTGTCAACCGCTTGACGTagcgttttttaaaccaatgAAAGTTGCATGGAGAGCTACACCGACAagttataaaatgaaaaacgcaCGTCAAGCAGGGGTACCAAAAGATACGTTTCCCAAACTTCTTAAAGAAGCATTGGACAAAATGAATGATGTAAAAATGAatgctattaaaaataatttaatcagcGGATTTGAAGCGACGGGCATATATCCTCTTAATTCGGGCAAAGTGCTTCAGAAACTTCCTGCTGGAGACGAAGATCTAACGCAAGAAGCAAATGAcacattaacaaaatttttacaagaaaaacgTTATGGGGATTGTACGAACGGAGCACCACGAAGAAAGAAAACAAGATTAACTGTTGAACCCGGTAAAAGTGCAGGGACCGCTGCAAGTAGTAGTTCGGACGAAAAGCAAGAACAATCATTAGATGATGATAGTGAAAATAATGATAATGCCATTGAAGATAACGATGAATTAGAATATATAGAGCCAACAATGGAACTtAGTTCAGCTACGGGTGTACTATTACCTCCGTACGTCATATACAAGGCTGAAAAATTGTGGCAGCAGTGGATTGAAATGGGTCCAAAAGGCAACCCTTGTTGTAATGATAAGTGCTGTAAGTCTGGATCCCGTTTCAATCGTACCCATCACGGATGGATGGACGCACAAACTTTTACCGATTGGTTTCAGTCATCTTTTTTACCGCACGCAAAGCGTTTACCTGGTCGCAAATTGTTGTTAGGGGATAACCTGTCATCACATTTCACAGACAGTGTTTTGAAGCAGTGTGAAGAAAACGACATCGCCTTTGTTTGTCTCCCAAAGAATTCTACCCATCTTACTCAACCCCTAGATGTAGGTTTTTTTCGTCCGTTCAAAATTGCTTGGAGGTCGGTGCTAATCAATTGGAAGAAAACCCATCCACAACAAACTTCTATTGACAAGAAAGATTTTCCACAATTATTAGCTTCCACTCTGGTTGAAATGAACAAGTCccaaaatgcaataaaaaaagatttgaTAAGTTCGTTTCAAGCGACCGGAATTGTGCCCCTTGATCCTGAACGAcaACAACGTTTTACAGCTGGACCATCAAGGAAGAATATTAAAAGACAGAAACTATCAGTGGAACCTGGAAAAAGCGTAGTAGCAAATAACGACGAAGATTCCAGCGAATCAGATATAAATGAGCAATTAACAAATGACAATTCTGACGATGATCCTCTAGAAGATGAGCTTGATGACGTGCGACAAGAAACCGAGTATTTTGAACCCGAAGAAAATGAAGTTATACCTAAAAAATTCCTCTTAGTTAAGGTTTATGGTGGATCTAGAAAGAAAACAGTGTATCGTTATGTAGCTATTGTAGAGAAGGTAACAGTAGATGAAGAAAAccaaaaagaaattgaattattgGGGCTGAAATCTGTGGACAAAtccaaaaaagtatttaaagttCAAGATGGTGACAACTTTGTGGCAGATATGTCGGATGTATTAGCCGTTTTACCTGATCCAGCAATTGAAAATGTAGATGGTTTTGTTATGTATTCattagaaaaagtaattgacgtgtttgaaatcaaataa
- Protein Sequence
- MVREYKRKPGTRQYVNYTSEQLDEALQKVAEGSLSMRAAAKQYKIPFSTINNRYHGRHVKTVGGQSVFTKAEEVALLNSVAQCSDWGFPLTTLEMRMFAKAYLDKQGRSAFQFENNLPGKDWVYGLLKPRAAVSRDTITTYFHNLENTLRDVPAQNIFNYDETNVSDDPGKVKGIYRRGVKYPEKIANHSKSATTIMVCGSDDGTLLPLYVIYKSEHLYNTWKENGPKGNPCCTKPCCAQGCRFNRTSHGWMDSNTFHDWFESTFLPHARRLEGKKVLIGDNLASHFNDAVIRLCEENNIAFVCLVANSTHICQPLDVAFFKPMKVAWRATPTSYKMKNARQAGVPKDTFPKLLKEALDKMNDVKMNAIKNNLISGFEATGIYPLNSGKVLQKLPAGDEDLTQEANDTLTKFLQEKRYGDCTNGAPRRKKTRLTVEPGKSAGTAASSSSDEKQEQSLDDDSENNDNAIEDNDELEYIEPTMELSSATGVLLPPYVIYKAEKLWQQWIEMGPKGNPCCNDKCCKSGSRFNRTHHGWMDAQTFTDWFQSSFLPHAKRLPGRKLLLGDNLSSHFTDSVLKQCEENDIAFVCLPKNSTHLTQPLDVGFFRPFKIAWRSVLINWKKTHPQQTSIDKKDFPQLLASTLVEMNKSQNAIKKDLISSFQATGIVPLDPERQQRFTAGPSRKNIKRQKLSVEPGKSVVANNDEDSSESDINEQLTNDNSDDDPLEDELDDVRQETEYFEPEENEVIPKKFLLVKVYGGSRKKTVYRYVAIVEKVTVDEENQKEIELLGLKSVDKSKKVFKVQDGDNFVADMSDVLAVLPDPAIENVDGFVMYSLEKVIDVFEIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -