Mfla004645.1
Basic Information
- Insect
- Malthinus flaveolus
- Gene Symbol
- -
- Assembly
- GCA_950108345.1
- Location
- OX467285.1:57977899-57979789[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.8e-14 9.6e-12 44.6 0.0 3 43 15 55 13 57 0.87 2 4 8.1 2.7e+03 -1.7 0.0 8 23 471 486 470 488 0.85 3 4 0.69 2.3e+02 1.8 0.0 8 23 491 506 489 508 0.88 4 4 9.7 3.3e+03 -1.9 0.0 8 22 518 532 517 533 0.86
Sequence Information
- Coding Sequence
- ATGGGGAAGATTTGCCGTAATGTTCGTGCCAAATGGGATACAGAAAAATTGAGCAATGCTCTAAAAGCCATCCAGCGTGGGTTATCGCAACAAAAAGCTGCAGAAAGATATGGGGTACCTAGACGCACACTGAGAAATCACATTAAAAGCGGTAAAGTTGAAAGGAAACTGGGTAGGGGATCAATTCTCACTCAACATCAAGAACAAGATCTTCTAAACAGAATTATAAGACTCGCTGAGGTTGGATATCCCGTCACTCCGCAAATAATGCGCCAtcaggtttttaaatttgtggttatgaataaaataaaacataattttaattgtgatCGTGAACTTGCTGGGCGTGGctggtttaaattatttatgaaaagGCATCCAAAATTAGCGAGACGTAAAGCTCAGAACATGAACCCAGCTCGGGCACAAAAATTGAATCGGTTTATTGTTGGagactattttaaaaagttaggcGAAGTTTTGGATACTCTAGACTTCAAAAACAAACCCGAACGTATTTACAACATGGACGAGAAGGGGTGCAGGCTGACGATTCATCACCAGCAATCAGTTTTAGCCCTCAAAGGCGTAAAGCGTTTACATCTCGTTGCACCCGAACATGCTGAAAATGTCACTGTTGTGGGATGCGTTTCAGCGAGTGGAAATGCAATACCACCaatgattttatttaaggGTAAACGATTAAAACCCGAATTTGAAGACAATTTACCAGCTGGAACATTAGTGAAAATGGCTCCAAAGGGTTCAATGACGACTGAACTATTTGTGCAATTTATTTGccatttatcaaaatttaaaatagctGGTCCAATTCTTCTAGTCTTTGATGGGGCTGCTTCGCATCTAGACTACACAATCGTAGATGAAGCGGACAGGCATAACATAACACTGTTATGTCTTCCAAGCAACACGACCCATGAGCTTCAACCTTTAGATAAATCGGTTTATAGGTCTTTTGAAGCTCATTGGGACCAAGAAgtgttaaaattttggggAAGCCATCCAGACAGAAGAATAACCAAACCAAGATTTAATTCAATCTTCTCGAAAGTATGGTCTCGATGCATGACAAATGAAAACATTGTTAACGGTTTTCGTGCTACTGGTTTATACCCATTTGACGAAAATGCAATTCCTGTCGCAGCATTTGCACCAAGCGAGCCTACTGAACGTACTGTAAGTCAACAGAGAGCAGAACTAAGTGAACACATAGACTCCACAGAGGAATTTTCCAGCGAGGACGAACTTCCACTATCCCAATTACAGCAGAATTTAAATACTGATGGAAACTCCCGATTTGGCACAAAAGAAGGAAGGGACACAACAAATCAGAAGGCATCGACTGAAAAACCTGCTCAATCTACATCTAAACTCAACTCAACTCGTACTGCAATCGCTGATGTTAGAAATCAGAAGGCATCGACTGAAAAACCTGCTCAATCTCGTACTGCAATCGCTGATGTTAGAAATCAGAAGGTATCGACTGAAAAACCTGCTCAGTCTACATCTACACTCAACTCAACTCATACTGCAATCGCTGATGTTAGAAATCAGAAGGCATCGACTTCAAATGCAACTGTAAGTGAATCGTGGTACTGCCCTTTATGTCAGGAGATCTCAGAAAAAGATATGAGACAATGTATTAAGTGCCAAACATGGGCTCATGATGAATGTTTGGGCTACACTGCATTAGACAAAGAAGAATATACTTGCATCATGTGTGAAAAATAG
- Protein Sequence
- MGKICRNVRAKWDTEKLSNALKAIQRGLSQQKAAERYGVPRRTLRNHIKSGKVERKLGRGSILTQHQEQDLLNRIIRLAEVGYPVTPQIMRHQVFKFVVMNKIKHNFNCDRELAGRGWFKLFMKRHPKLARRKAQNMNPARAQKLNRFIVGDYFKKLGEVLDTLDFKNKPERIYNMDEKGCRLTIHHQQSVLALKGVKRLHLVAPEHAENVTVVGCVSASGNAIPPMILFKGKRLKPEFEDNLPAGTLVKMAPKGSMTTELFVQFICHLSKFKIAGPILLVFDGAASHLDYTIVDEADRHNITLLCLPSNTTHELQPLDKSVYRSFEAHWDQEVLKFWGSHPDRRITKPRFNSIFSKVWSRCMTNENIVNGFRATGLYPFDENAIPVAAFAPSEPTERTVSQQRAELSEHIDSTEEFSSEDELPLSQLQQNLNTDGNSRFGTKEGRDTTNQKASTEKPAQSTSKLNSTRTAIADVRNQKASTEKPAQSRTAIADVRNQKVSTEKPAQSTSTLNSTHTAIADVRNQKASTSNATVSESWYCPLCQEISEKDMRQCIKCQTWAHDECLGYTALDKEEYTCIMCEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -