Basic Information

Gene Symbol
kn
Assembly
GCA_950108345.1
Location
OX467286.1:24264995-24279104[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.9e-145 2.7e-141 472.0 0.0 182 387 29 241 17 249 0.98
2 2 7.6e-08 0.00053 18.6 16.3 422 561 256 386 243 395 0.67

Sequence Information

Coding Sequence
ATGGTGAGCTACAGAGATACGGAAACTAGGACAGGAAGGGCTCAAGTTGAAGAGACCTCCCAGGCGTATACACCGAGGCAAAGGAGattctTCCTCAAGTTCTTCCTAAAGTGcaatcaaaattgtttaaaaaatgcaggAAACCCGAGAGACATGAGAAGATTTCAAgTCGTCATCGCCACGCAAGTTAGCGTCGAGGGACCATTATTGGCGATTTCCGATAATATGTTTGTGCATAATAATTCGAAACACGGAAGGAGAGCGAAGAGACTGGATCCCTCCGAAGGTTTATATCCACCTCTGCCTGTAGCCACTCCGTGCATTAAAGCAATTAGTCCTAGCGAAGGATGGACTTCGGGAGGATCCACGGTCATCATTGTCGGAGACAATTTCTTCGACGGCTTACAAGTCGTCTTCGGAACGATGCTAGTTTGGAGCGAGTTAATAACGCCGCACGCAATAAGAGTTCAAACGCCACCGAGACACATACCGGGAGTCGTAGAAGTTACATTATCATATAAATCAAAGCAATTTTGTAAGGGAGCACCGGGAAGATTTGTATATGTTTCTTTAAATGAACCGACAATAGATTACGGATttcaaaggctacaaaaacTTATTCCGAGACATCCCGGTGATCCGGAAAAGTTACCAAAAGAAATCATTTTGAAAAGGGCGGCAGATTTAGCCGAAGCTCTGTATACGATGCCACGAAATAATCAGTTATCGCTCACGGGTCCGAGATCGCCGACGATGGGTAACAACGGAATGACGCCGACGTTTAACACGTACACAGGGCAGTTATCGGTCAGCGTGCAAGACAGCGGAAACGGTCAGTGGACAGAAGAGGACTACGGAAGAACGCAAAGCAGTAGTGTGTCTCCTCGTGGTGGTGGTTATTGCTCCAGCGCCTCCACACCTCATTCGTCTAACGGAGGGAGTTCGTACGTGGGCAACATGAATAGTTACGGAAGCTCAACTCCAACGAGTACTTCTCAATTATCGAACATGATATCCGGCTCACAGTCGCCCGGAATATTTAATTCTGCACCAAtttctccGGAGTCGAGTCATTATCATTTTGGCGTACACAACCATAAACCGGACAAAGAGAAAAGCGCGTTCGCCCCGGTGATACGGGGAAATTCAACTTCCCCTGCTCACCCACCGGCACCCGCGCTTTTCCACCACCAGCCCGTCACTGGCTGGCACCACTTGGCTGTGCAATGttag
Protein Sequence
MVSYRDTETRTGRAQVEETSQAYTPRQRRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDPSEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMPRNNQLSLTGPRSPTMGNNGMTPTFNTYTGQLSVSVQDSGNGQWTEEDYGRTQSSSVSPRGGGYCSSASTPHSSNGGSSYVGNMNSYGSSTPTSTSQLSNMISGSQSPGIFNSAPISPESSHYHFGVHNHKPDKEKSAFAPVIRGNSTSPAHPPAPALFHHQPVTGWHHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00429627;
90% Identity
iTF_00646581;
80% Identity
-