Basic Information

Gene Symbol
Kdm5
Assembly
GCA_950108345.1
Location
OX467290.1:2976776-2986289[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.7e-23 1.3e-19 70.6 0.1 2 89 123 206 122 206 0.94
2 2 3.9 7.4e+03 -2.4 0.0 49 80 984 1012 982 1015 0.71

Sequence Information

Coding Sequence
ATGACTTCCAAAAGAGAAAATTCTCCTAATAGTTCTAAAAGTTCGACTTGCGACGTTTTCGAAAGCCccagatattttaaaagttgttcaAATGGATCGAAAAGTACTTCGGGGATTAACTCCCTTAAAGCGGAGGCTTTCGAATTCGAAATACCACAAGAAGCGCCAGTATTTCATCCTACGGAAGAGGAGTTTCGAGATCCTTTGacttacataaataaaattcgggCCGTAGCCGAATTGACTGGtatatgtaaaattaaaccacCAATGaaTTGGCAACCACCGTTCGCTGTTGATGTAGATAAATTACGCTTCACTCCTAGAATTCAAAGACTAAATGAATTGGAAGCAAAAACgagagttaaattaaattttctagatcaaattgcaaaattttgggAACTGCAAGGTTCCTCTCTTAAGATTCCTATGGTCGAAAAGCGAGCTTTAGATCTCTATACATTACATCGACTTGTACAAAAAGAAGgTGGCTCGGAGATAGTGTCGAAAGATAGAAAGTGGTCGAAAATAGCCGTATTTATGAGTTATCAGGCAGGAAAAGGTTTAGGGACTATACTAAAAATGCACTATGAAAGGTTATTGTATCCTTACGAcgtatttaaaattggaaaagccGTTAGCGTGAACGTAGAAGAAAATCCAATCGAAAATGCCGATAGAGATTATAAACCGCACGGAATAGTTGGACGAATGAGTGTAAAACCACCTCCGGATAAGCACTTCAGGCGTTCAAAGCGGTACGAAGAGGAGCTCCTCAAGATTAAAAATGACTTTGAGTACATGGgcaatgtttttataaaacacgAAGTGTGCGAGCCTTCGGAGTCAGATGGAAATAAAGAGCTTAAACGTTTGCAGTTTTACGGAGCGGGTCCGAAAATGGCTGGTTATAATACCAAAAGAGCAAATCAATTGAGGCTTCTTAAACacaagaaatttgaaaacgaccctCTTGCTAAGTATGTGTGCCAACAATGCGCAAGAGGGGATATTGAGGAGTCGATGCTCTTATGTGACGGTTGTGACGATAGTTACCATACTTTTTGTCTTTTGCCCCCACTAACTGAGATACCTAAAGGCGATTGGCGTTGTCCTAGGTGTGTGGCTGTTGAAGTATCAAAACCTACCGAAGCTTTTGGCTTCGAACAAGCTCAGCGTGAGTACAGTTTGCAGCAGTTTGGAGAAATGGCGGATCAGTTTAAGTCGGATTATTTTGGCATGCCGGTTCATttgGTGCCTACACATGTGGTGGAGAAAGAATTTTGGCGAATCGTGTCATCTATAGACGAAGATGTGACGGTCGAGTATGGAGCAGATTTGCACACCATGGATCACGGTTCGGGTTTTCCAACGTCTACTTCGTTAAATTTGCTTCCTGGAGATCTCGAATACGCCGTATCGAAttggaatttaaataatctacCAGTTTTAGAAGATTCGGTTTTAGGTCATATTAATGCCGATATATCTGGTATGAAAGTACCGTGGATGTATGTCGGTATGTGCTTTGCAACGTTTTGTTGGCACAATGAAGATCATTGGTCTTATTCTATCAATTATTTACATTGGGGGGAACCGAAGACGTGGTATGGCGTTCCCGGCTGCAAAGCTGTGGCATTTGAAGAAACGATGAAGTCAGCTGCCCCAGAATTATTCCAGTCGCAACCTGATTTGTTACATCAGCTAGTCACCATTATGAATCCAAACATTTTAATGGCCGCCGGAGTACCGGTGTATAGAACAGACCAAAATGCCGGAGAATTTGTTGTGACGTTTCCGAGAGCTTATCACGCCGGTTTTAATCAAGGGTATAATTTTGCTGAAGCTGTTAATTTTGCCCCAGCCGATTGGTTGAAAATGGGCCGTGATTGTATTCAGCACTATTCCATACTTCGTcgtttttgtgtattttcacACGACGAGCTCGTCTGTAAAATGGCATTGGAGCCTCATAAATTAAGCCCACTTATTGCCGCTGCAACTTACCAAGACATGATAATAATGGTGGAtaccgaaaaaaaattaagaaaagctCTACTAGAATGGGGAGTGACGAATGCCGAACGAGCAGCATTTGAATTAGTACCGGACGACGAACGCCAGTGTGAAATTTGCAAAACGACGTGCTTCTTATCCGCCATAACTTGTGAATGTAACCAAACTTTATTAGTGTGTCTTCGTCATTTTAGCGAATTATGTAAGTGCGCTCCAGAAAATCACACTTTGAGGTATCGTTACACACTCGACGAATTACCGAGgatgttacaaaaattaaaagtcaaAGCGGAAGCGTTCGACTGTTGGCTGAGTAATGTGAGAAATTCGTTGGATCCTAGTATCAAATCGACATTGACTTTACAAGAGCTGAAAGGTCTTTTATGCGAAGCCGAAACAAAGAAGTTTCCTAAATGCGACCTGTTGGCCACTTTATCGAATTCCATAGAGGATGCCGAAAAATGTGCTAGCGTCATTCGTCAACTCGATTCAACGATGGCTCGTACACGAACACGTAATTCTACCGATAGAAAATACCACTTAAATTTAGAAGAGctacatttatttataggaGAAATTGATAGTTTAGCCTGTGTCTTAGAAGAAGCTCAAATCGTAAAAGATTTATTAATGGAATCGAACAGGTTCGAAGAGAGCAGTAAAGCTTTGCTCGAAAAACCTCTGATGGAGTGCAGTTCGGAGGAAATAGAAAAATGCTTAGAACACGGTGATTCGATATGTATAGAACTACCTTCATTAAGTAATATGCGAGACCGTTTAAACCAAGTTAAATGGTTGGACGAACTCGTTAGCGCAGGAGAAGAAAAAGAACCGGCAACTATGGAATCGATCCAACAATTCATAGACGTCGGGGAGAATTTAAATACGGACTCTGTGATCgaagataaaattaatgaattgaGAGAACGTTTGTGTCAAGGGCAAAGTTGGGAAGAGCGAGCCAAACGTTTATTGGTAAGTCCATCAAGCGATATAATGACTGAAGTGCAGAAGTTATTCGACGAAGCTAAAGAACTCAATATGTATCTTCCTACTGAGAAATCTTTAGTCGACGGTGTACAGAGCTTAAAAGAATGGACCGCTAGGTTGGACGAAATAAACGCTGACGAATTTTACCCTTACATTAACGccgtggaaaatttaatacagaGAGGAAGATCGATAACTTTACCCATACCAGATATATCCGATTTAGAAGAGTATGTCATGGCCGGTTATAATTGGAGAGATAAGACTAGtcgtgcttttttaaaaaagaattctcCAATTTCTCTAATGGAAGCTCTTTCTCCTAGATTAACGTCTGTGTTAATAAGCATGAAATCGCGGCGTAAACACGTGGAAGATTTACAACAATACTTTATCACCAACGAAATGGATCCAGTGGACGTGGTTAACACGTTTAAAGAAGCCGAAGAGAGAGAATTAGAAGGTTTGAAGTCGTTGCGAAGTATTAACATGGCTAAAGGTTTTACTGCGGAACAAGAGAGCAAGTTTTGTGTTTGTCAACGAGGACCTCACGGTGTAATGATGCGTTGTGAACTCTGCCGCGATTGGTTCCATTCTAGTTGTGTAACTTTACCAAAATTAGGTAATACTCCGATTAAAGGAAGCGTCATTACGACGGCGCTGAGAATGGGTTTTAAAGACTGCAAATTTATATGTCCCAATTGTTGTCGTACGAAGCGACCGCGTTTGGAAtctattttaagtttgttagTGTCTCTTCAAAAACTATCGGTTCGTATTCCTGAAGGAGAAGCTTTACAGTGTTTAACAGAACGTGCGATGACTTGGCAAGATAGGGTAAAACATCTTTTGCAGACAAACGAATTCGTACTGGcagttgcaaaattttctaatttaactcAAAAGTATTCCGAAGTTGCCGCGagacagaaaacagaaaaaattattagttcgGAATTAAAAAAGGCTGCCAACAATCCAGAATTACAACAACGAGTACTCGATATTGCCTCCTCTAGTGGTATTAGTTCCGAAGAACGTTTTACGGAAAGATTACAGTTGTCGGGCGATTGTAACAAAGTGTGCGACGATGCTATAGACGAACACGCTTATTCCCTTCATATTCCCAGCATAGACGACAGAGATTGCTCTTTTCAGCTAAATAGTCATACACATAAAATGTTAGAAGAAATACTTCTGGAAGGCGATCTGCTCGAAGTATCATTAGATGAAACTTTACAATTATGGAAATTACTTCAAGTGTCTCGAGACTCCAATAAAGAACCTATTTTAATCGACTTTAACgAACCTAAATTTGTGGTAAGAAAAGGACGTAAACGTCGTTCCGACGAATACGAGGCTAAAAAGATGAAACAAAGGCGGCACATAGCAAGAAAAGTTACGAAACGTAAAACCAAAGATGCAAGTAAGAGATCTGAAAGTGGCGGACGTCAAAAATCGGGACAGAACAATGATAGCAGCTCTGAAGATGACGAAGTAGAACGTTGCGCTTCGGGGAATTGTCTTCAACCTTCGAGTGAAGAAGTGGATTGGGTACAATGTGATGGTGGGTGCGAACAGTGGTTTCATATGGCTTGTGTGGGATTATCTGCTCAGGACATAAACGAAGACGaagattatttttgtttgactTGTAGTCGTACAACTTCGGCTTTTGGTAATTTACCACAATCTCCGGACAGTCAAACAATAGAAATACCACTTTCTCCTGGTTCTACGTATACATCGAATCTACAAAGGGACgaagtttag
Protein Sequence
MTSKRENSPNSSKSSTCDVFESPRYFKSCSNGSKSTSGINSLKAEAFEFEIPQEAPVFHPTEEEFRDPLTYINKIRAVAELTGICKIKPPMNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLVQKEGGSEIVSKDRKWSKIAVFMSYQAGKGLGTILKMHYERLLYPYDVFKIGKAVSVNVEENPIENADRDYKPHGIVGRMSVKPPPDKHFRRSKRYEEELLKIKNDFEYMGNVFIKHEVCEPSESDGNKELKRLQFYGAGPKMAGYNTKRANQLRLLKHKKFENDPLAKYVCQQCARGDIEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPRCVAVEVSKPTEAFGFEQAQREYSLQQFGEMADQFKSDYFGMPVHLVPTHVVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTSTSLNLLPGDLEYAVSNWNLNNLPVLEDSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGCKAVAFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMAAGVPVYRTDQNAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRDCIQHYSILRRFCVFSHDELVCKMALEPHKLSPLIAAATYQDMIIMVDTEKKLRKALLEWGVTNAERAAFELVPDDERQCEICKTTCFLSAITCECNQTLLVCLRHFSELCKCAPENHTLRYRYTLDELPRMLQKLKVKAEAFDCWLSNVRNSLDPSIKSTLTLQELKGLLCEAETKKFPKCDLLATLSNSIEDAEKCASVIRQLDSTMARTRTRNSTDRKYHLNLEELHLFIGEIDSLACVLEEAQIVKDLLMESNRFEESSKALLEKPLMECSSEEIEKCLEHGDSICIELPSLSNMRDRLNQVKWLDELVSAGEEKEPATMESIQQFIDVGENLNTDSVIEDKINELRERLCQGQSWEERAKRLLVSPSSDIMTEVQKLFDEAKELNMYLPTEKSLVDGVQSLKEWTARLDEINADEFYPYINAVENLIQRGRSITLPIPDISDLEEYVMAGYNWRDKTSRAFLKKNSPISLMEALSPRLTSVLISMKSRRKHVEDLQQYFITNEMDPVDVVNTFKEAEERELEGLKSLRSINMAKGFTAEQESKFCVCQRGPHGVMMRCELCRDWFHSSCVTLPKLGNTPIKGSVITTALRMGFKDCKFICPNCCRTKRPRLESILSLLVSLQKLSVRIPEGEALQCLTERAMTWQDRVKHLLQTNEFVLAVAKFSNLTQKYSEVAARQKTEKIISSELKKAANNPELQQRVLDIASSSGISSEERFTERLQLSGDCNKVCDDAIDEHAYSLHIPSIDDRDCSFQLNSHTHKMLEEILLEGDLLEVSLDETLQLWKLLQVSRDSNKEPILIDFNEPKFVVRKGRKRRSDEYEAKKMKQRRHIARKVTKRKTKDASKRSESGGRQKSGQNNDSSSEDDEVERCASGNCLQPSSEEVDWVQCDGGCEQWFHMACVGLSAQDINEDEDYFCLTCSRTTSAFGNLPQSPDSQTIEIPLSPGSTYTSNLQRDEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00950501;
90% Identity
-
80% Identity
-