Mgen022490.1
Basic Information
- Insect
- Malaya genurostris
- Gene Symbol
- stc_1
- Assembly
- GCA_030247185.2
- Location
- CM058072.1:289652825-289655919[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.3 2.8e+04 -3.5 1.1 15 18 267 270 266 271 0.81 2 14 1.8 3.9e+04 -4.0 1.6 15 19 294 298 293 298 0.81 3 14 0.079 1.7e+03 0.4 0.3 4 10 327 333 326 335 0.94 4 14 1.8e-06 0.038 15.2 15.7 3 19 340 356 333 356 0.86 5 14 5e-06 0.11 13.8 12.9 1 18 392 409 392 410 0.91 6 14 8.3e-09 0.00018 22.7 13.6 1 18 450 467 450 468 0.97 7 14 1.8e-05 0.38 12.0 14.1 1 18 509 530 509 531 0.84 8 14 0.16 3.4e+03 -0.6 7.5 1 11 571 581 571 582 0.93 9 14 0.025 5.3e+02 2.0 1.7 4 10 586 592 585 592 0.95 10 14 2.7e-08 0.00057 21.0 17.5 1 18 598 615 598 616 0.97 11 14 2 4.3e+04 -7.1 10.5 10 18 663 672 652 673 0.77 12 14 2.8e-06 0.06 14.6 8.0 1 15 709 723 709 724 0.95 13 14 4.8e-06 0.1 13.8 13.1 1 19 741 761 741 761 0.92 14 14 0.37 8e+03 -1.8 0.5 7 12 776 781 770 781 0.71
Sequence Information
- Coding Sequence
- ATGGCGAGTGGTGGAGAGGGCCCTTCATCCTCTAGGTCGAATCAAACAGAAGGGCATAACACCTTCGAGGATTTTATTTCGCAGTTCAACGCACGAGCCTCACTTCAAGGAGGAACATCAAACGGAGGTGCTTCTTTCGGATATGGATCGTCGATGGAAGCAAGCTGGTCTGATGGGTCTTCCGTTTTGAAACCAACtgcggcggaattttttcctcgTTGGCAGCGCCAGGATGATGGTAATTCTGTTAATAACAGTGAGGGTAGCGAGCAGCCTCACGGAGGAAGAGTATCAGGAGCCATTCGAAAACAATACGATGGTGGACAGAAGTGGGGCAACCGGAGAAATAATCGCAACGGTGATAGGCAGGGATTTGCAAGAAATCGTGAACGCAACAACGGCGGGGAGGAGAGAAATTTTGATGGTGAGGAAAAACGATTTTTCGATGGTCCTCAACATTTTCCTAGGGAAAATCGAAGACCACAGCAACATCAACACCAACAGCCAAATGGAAGATGGAAGGGAAATGTTGGAGGTCGATTCCGTGGCAATACACGTGGAGAAAGGAACGATCAGGACAGATTCACAACTCAAGCAAACGGAAGCAAAGAAACCGAACCGAAGTACGAACGAAAGCAAAATGGATATCAAAAAAACCGTGCCCGCCTAGAGAAGTTGGAGGCCAAAATCACTTCCAAGTGTTCACAGCGTGAGAAACTTATCCGAGAGTTGGACTCTTCCAAATTGGAGTGTCTTGTGTGTTGCGATTTGGTGTGGCCGAACCAATCCATTTGGTCATGTCCCAACTGCTATCACATTCTGCACCTCAATTGTACCACTAAGTGGGCGAGTAGCTCAAAATCGGACGATGGTTGGCGTTGTCCAGCTTGTCAgaatatttccaaaaaaatccCCCGGGAATATTATTGTTTTTGTGGTAAACAGAAAAATCCTCAGTACAATAGGAATGACGTAGCGCATTCCTGTGGTGAGCTCTGCGGTCGTGAGGAGCTTTGCGATCATGCCTGCACTTTGCTGTGCCATCCAGGGCCTTGTCCTCCGTGCCAGGCGTTAGTCCAGCGGCAGTGCGGTTGTGGTAGAGAATCTAAACCGATGCAGTGTAGCCAGAAGGACGAGTTCTTCTGTCAGGCCATCTGTGACAAGGCACTGAACTGTAATGTGCATGCCTGTCAACAGCAGTGTCACAGTGGCGAATGTCAACAATGCGACAGAACCGTCGAGCATCGATGCTTTTGTGAAAAAGAGAAGAAAAACGTCACTTGCACGGTTGACCATTTGGACAATACCCGCTTTTGTTGCGGTGCAAGTTGTGATGCGCAGCTCAATTGTGGTAATCATAAATGTGTCAAAATTTGTCATGCCGGACCATGCGGTGAATGTGAACTATCTCCTACTTTGATAACGTCCTGTCCCTGCGGAAGACAAGCCGTTGTTAGTGGGGAAAGAGAATCTTGTCTGGATCCCATTCCGGTGTGCAAAGGAGTATGCGCCAAACAGTTGGTTTGTGGTAATCCAGGTTCACATCACGTGTGTTCCGCACGGTGCCATCTCGGGGACTGTCCCCCTTGTAACAAATCTACGGTTGTGAAATGTCGTTGCGGTCACATGGACCAACAGATCAAATGTAAACAATTGAAAACTCGCGCCGATGATGCCAGATGCAAAAAGCGCTGCACAAAAATGCGAAGCTGTGCCAAACACCGTTGCAATCAGGAATGTTGCATCGATTACGATCACACTTGTCCGAAAACTTGCTCCCAGATGTTGTCCTGTGGTCGCCATCGTTGCGACAAACCATGCCACAAGGGCTCCTGTCAGACCTGTCACCGTGTTTCCTTCGACGAACTAACCTGTGAATGTGGATCGAGCGTCATCTTCCCACCAGTGCCTTGCGGAACGAAGAAACCACTCTGTGATAAGCCCTGCTTACGACGGCATCCATGTTCTCATCCGGTACTGCACAACTGCCACTCCGATCCGGAATGTCCACCGTGCGTCGTGCTGACCACCCAGCACTGTTACGGCAAACATGAACAGCGTAAAACAATTCCCTGCTATCAGAACTCATTCAGCTGTGGGCTTCCGTGCGCCAAGCCACTGCCATGCGGTCGACATAAATGCATCAAACCGTGTCACGAAAATCAATGCTTTGCCGAGGGAGAAATTTGCAAACAGCACTGCACCATGGCTCGGACCACCTGCTCACATCAGTGTAAGGCACCGTGTCACGACGGCGAATGTCCCCAGGATTTGCCGTGCAAGGAAGTAGTCGAGGTGACATGCGAGTGTGGAAATCGCAAACAGAACCGGACCTGTCACGATTTCAGCAAAGAATATCGTCGGATCACGTCGGCCCAACTGGCATCGTCCATGCAGGAAATGCAACGGGGCGGGTCGGTTGAACTGAGCGATATTCTCGGGCCAGTCAAAGCGAAGAACAACAAAACCTTGGAATGTAACGATGAGTGCCGCACCCTGGAACGAAACCGGCGGCTTGCCATCGGTCTACAGATTCGCAATCCCGATTTGTCATCCAAGCTTCAACCGAACTAttcggactttctgaaaacgtACGCCAAGAAGGACCCCACTTTGATAAAAATGATTCACGAAAAGCTAACCGAACTGGTCAAACTGGCCAAGGAAAGCAAAAAGTCCCGTAGCCACTCGTTCCCGGTGATGAACCGCGACAAACGAAACGTGGTACATGAGATGTGTCGAATGTTTGGCGTCGAATCAGTCGCGTACGATGCCGAACCGAATCGGAACGTTGTCGCTACTGCGGATCGTTTTTCGtcgTGGCTGCCCAGCATGAGCCTACTGGAAGTCATTCAACGTGAAAATGGCCAACGACGTGTTATTTTGCCGAATTTGAACGCTTGGGGAAGAACGGGAAGCAGCACCAAATGA
- Protein Sequence
- MASGGEGPSSSRSNQTEGHNTFEDFISQFNARASLQGGTSNGGASFGYGSSMEASWSDGSSVLKPTAAEFFPRWQRQDDGNSVNNSEGSEQPHGGRVSGAIRKQYDGGQKWGNRRNNRNGDRQGFARNRERNNGGEERNFDGEEKRFFDGPQHFPRENRRPQQHQHQQPNGRWKGNVGGRFRGNTRGERNDQDRFTTQANGSKETEPKYERKQNGYQKNRARLEKLEAKITSKCSQREKLIRELDSSKLECLVCCDLVWPNQSIWSCPNCYHILHLNCTTKWASSSKSDDGWRCPACQNISKKIPREYYCFCGKQKNPQYNRNDVAHSCGELCGREELCDHACTLLCHPGPCPPCQALVQRQCGCGRESKPMQCSQKDEFFCQAICDKALNCNVHACQQQCHSGECQQCDRTVEHRCFCEKEKKNVTCTVDHLDNTRFCCGASCDAQLNCGNHKCVKICHAGPCGECELSPTLITSCPCGRQAVVSGERESCLDPIPVCKGVCAKQLVCGNPGSHHVCSARCHLGDCPPCNKSTVVKCRCGHMDQQIKCKQLKTRADDARCKKRCTKMRSCAKHRCNQECCIDYDHTCPKTCSQMLSCGRHRCDKPCHKGSCQTCHRVSFDELTCECGSSVIFPPVPCGTKKPLCDKPCLRRHPCSHPVLHNCHSDPECPPCVVLTTQHCYGKHEQRKTIPCYQNSFSCGLPCAKPLPCGRHKCIKPCHENQCFAEGEICKQHCTMARTTCSHQCKAPCHDGECPQDLPCKEVVEVTCECGNRKQNRTCHDFSKEYRRITSAQLASSMQEMQRGGSVELSDILGPVKAKNNKTLECNDECRTLERNRRLAIGLQIRNPDLSSKLQPNYSDFLKTYAKKDPTLIKMIHEKLTELVKLAKESKKSRSHSFPVMNRDKRNVVHEMCRMFGVESVAYDAEPNRNVVATADRFSSWLPSMSLLEVIQRENGQRRVILPNLNAWGRTGSSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -