Basic Information

Gene Symbol
grn_2
Assembly
GCA_030247185.2
Location
CM058071.2:44687047-44693533[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.23 1.1e+03 0.5 0.0 13 25 5 16 3 16 0.84
2 2 1.9e-20 9.2e-17 61.6 4.7 1 35 26 59 26 60 0.98

Sequence Information

Coding Sequence
ATGCATGATTTCCGGAAGGGACCCTCGGTCCCAATGTTGTGTGATGCTCTACAGTGTCCTGTTCAGGGCCGAGAGTGCGTGAACTGCGGTGCTACGTCGACGCCCCTGTGGCGACGGGACGGTACCGGTCACTATCTGTGCAATGCCTGCGGTCTCTACTACAAAATGAACGGCCAGAACCGGCCGTTGATCAAACCGAAGCGACGACTGGTTAGCATGGTGGTTGTGGTGGCGGACACTAGAAAAAATGTCCGGAACGATGACAAGGCTTCAGGAGCACCTGTGAAAGTTCCCGTGATTAGACCACAGTTGTTGACGATCTGA
Protein Sequence
MHDFRKGPSVPMLCDALQCPVQGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLVSMVVVVADTRKNVRNDDKASGAPVKVPVIRPQLLTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-