Mgen002147.1
Basic Information
- Insect
- Malaya genurostris
- Gene Symbol
- grn
- Assembly
- GCA_030247185.2
- Location
- CM058071.2:44937328-44951985[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-19 9.6e-16 58.3 4.3 1 35 274 307 274 308 0.98 2 3 7.1e-19 3.4e-15 56.6 7.3 1 35 333 366 333 367 0.97 3 3 1.7 8.2e+03 -2.3 0.0 10 15 409 414 406 416 0.76
Sequence Information
- Coding Sequence
- ATGTCCCCGCATATGGCCCCACAGGTGTGTCGGCCGCACTTCCCCAGCCCGCTGTCGTGGTTCAACGAATCTACGAAACCTTTCGCGGCCAGTGGTAGCTGGAGCAGTCCCTTTACCTGCCCTCAAGATCCACAAGACAGCAAACAGAGTCAGTTACAGAGCAGTCAGACCTCAGCCGGTCAGCATCTGTTTTCCTTCCCGCCAACCCCACCGAAAGATTCGACGCCAGACTCGGTGCAAACCACGCCCAATGAGTATCAAACCACCCTGAACAACTTCATGCACCAGAGTCAAACGTCATCCAGTGGCCTGAATGTCGCATCGAGttccaataacaacaacaacaattctAGTATTTCGTCGCATTCGGCGGACAACTGTGGAATCGACGTAAAACCGTGCTTATCCGGTAGCTCACTGAGTGACCGGAACAATGCGGAGGTGGAACAGCATCATCCGAAACATCGGGAAGGTACgggtaacaacaataacaacaacaatagcTCTAGTACCAATAGTCACGGTGGGAGCAATAGCAGTGGTAACAGTAGTGCTGCCTACCACAATTCCGCCACCAACAACTCGTTCAACATGTTCGATCAGTCGCACCATAGCGGAGTGACCGGCGGGTACGATCACTCCGGCTACGGATTCCACCATTCCGGGCACGGCATCGGCGGTGGAGGCGGCAGTGGTAACGGTGGTGCTAGCAGTGGAACCGGTGGATCGTACCAGCAAAGCTCCCGGCCAAGCCTCATGAACAGTTCACACATGAAGGCGCAACGGGCCAAAGTGAAATCCAGTGCCGAGGGACGAGAGTGCGTCAACTGTGGTGCCACCTCGACGCCTCTGTGGCGGCGAGATGCGACCGGCCACTATCTGTGCAATGCATGCGGACTGTACTACAAAATGAACGGCCAAAATCGGCCGCTAATCAAACCGAAACGGAAACCAGTTACCTCCCAGCAAAGCGCTGCCCGGCGGGCGGGAACGTCATGTGCAAACTGCAAGACCACAACCACCTCGCTGTGGAGGAGGAACCAAAGCGGAGAACCAGTTTGCAACGCCTGTGGACTGTACTACAAGTTGCATAATCACCGCAACGCCGAGTCAGGTTTGCTTTCGACTCGTTGCATACCATCCATAATTCTATGCACGGGAGAAACATTGTTCCCCAAAACCGACACCGGGCGCGTCGAGGTCAGCGTGTCATCGTTGTTTTCGGGCTGCTGGCGTAGCGGAAGTTCCATCATCAGCTGA
- Protein Sequence
- MSPHMAPQVCRPHFPSPLSWFNESTKPFAASGSWSSPFTCPQDPQDSKQSQLQSSQTSAGQHLFSFPPTPPKDSTPDSVQTTPNEYQTTLNNFMHQSQTSSSGLNVASSSNNNNNNSSISSHSADNCGIDVKPCLSGSSLSDRNNAEVEQHHPKHREGTGNNNNNNNSSSTNSHGGSNSSGNSSAAYHNSATNNSFNMFDQSHHSGVTGGYDHSGYGFHHSGHGIGGGGGSGNGGASSGTGGSYQQSSRPSLMNSSHMKAQRAKVKSSAEGRECVNCGATSTPLWRRDATGHYLCNACGLYYKMNGQNRPLIKPKRKPVTSQQSAARRAGTSCANCKTTTTSLWRRNQSGEPVCNACGLYYKLHNHRNAESGLLSTRCIPSIILCTGETLFPKTDTGRVEVSVSSLFSGCWRSGSSIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01472164;
- 90% Identity
- -
- 80% Identity
- -