Basic Information

Insect: Malaya genurostris
Gene Symbol: RERE
Assembly: GCA_030247185.2
Location: CM058071.2:6191157-6280762[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00016 0.012 17.2 0.2 2 23 394 415 393 415 0.97

2 5 3e-06 0.00024 22.6 1.3 1 23 421 443 421 443 0.99

3 5 0.00024 0.019 16.6 2.6 1 23 449 473 449 474 0.95

4 5 0.0013 0.1 14.3 0.8 2 23 740 761 739 761 0.97

5 5 0.0024 0.19 13.5 0.3 1 23 1730 1754 1730 1754 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00016	0.012	17.2	0.2	2	23	394	415	393	415	0.97
2	5	3e-06	0.00024	22.6	1.3	1	23	421	443	421	443	0.99
3	5	0.00024	0.019	16.6	2.6	1	23	449	473	449	474	0.95
4	5	0.0013	0.1	14.3	0.8	2	23	740	761	739	761	0.97
5	5	0.0024	0.19	13.5	0.3	1	23	1730	1754	1730	1754	0.95

Sequence Information

Coding Sequence: ATGATTATTATTTTACAAGCGGTACCGCTCAGTGCGATTTCCCCTGCCGCCAATCAGTGCGCCCCGTTTCGGAATCGAAAATCAACCTTCGGGGCAGAGCCGTTGAACGTGTACCGAACTCTGGCAGCAGATCCAGTCCAGTCCAGTGTCGCGATGGCGATGCGATTCCTTTATCGGTCCCCATTTTGTGTTTTAGCAGTACAGAACAGCATCCGCCTACCGCTGGCCGGCCTGGCACCGCCCCGAGTTCTGATGTGTAGCGCCTCGATGGGTGCCGAAGGTTCCGTCACGTTGCAGTTGCGTGAAGCCGTCCAGGCACCGGATGCCGCCGGAACCGCACTGTCCGATCACGGTGGGCTCACCATCGGCTATCCGGATCCGGAGATGTTAGCCGATATGCTCGGTTCGTTCCAGAGTGCCTCGGCTGCCGGGTTGGTGGAGCAGCAGTCTTCCGCAGTGAGTGGCGGTAGCAATTTTGATCTCATCCAGGAcagcagcagtagcaattgcagcAGCCGACAGTCCGGGCTGGACCCGGtcgagcagcagcagcagcaacatcaGAACCTTACCGGTACTCTGCTGGGCAAGGCTTCATCACCCACCGGATGTAGTAGCAGTAGTAACACTAGTGGTAGTAAATCAAACGTCAGCTGTAATGTCAATGGGAGTTTGACGCTGAGCGGTGGCAGCATCAAGAGTGAGAtggCAACCAAAATCGATAAGCTGAACGGATGCATTCCGGTGATCGGATCTGCTTCCTCCTCTCCCAGCAGCAGTAACTGCAGTACCAGCAGTAATAGCAGTAATAGCAACAGCTGCAGTAGTAGTAATAGCAGTTCCAAGTCTACTACAGCAGCACTAGCAGCGGTGACGGCGGCGGCATCCGCTGCCAACAGTGCCAATGGCAGCAGTACAACGGTCGTGTCCGCCAGTGCCGTCGCCGCCGCCGCCCTTGTTGGTGGCCATAGCAGCCGGAGTGACAGCACCAGTAGCTGTAGTAGcaacagtagcagcagcagcagcagtagtagcAGTAGTAGTAGCAGCAGTAACGGTAGTTGCGGCAGCTCCAGTGGCAGTGGATCGTCGTCGGTCGCGGTCACGGTGAACGGGCTACCGACGGTGGTCAAAAAACCACGGCCCAAAACCGTCTCCCCGACACGACACGGTCCGCAACAGTGTCAGGTTTGCAGTAAAGTGTTCGGGAATGCATCGGCCCTGGCCAAGCACAAGCTGACGCACAGCGACGAACGGAAGTATGTTTGCGGAATGTGCTCGAAGGCGTTCAAAAGACAGGACCATCTTAACGGTCACATGCTGACACACCGGAACAAGAAACCGTACGAGTGCAAGGCCGAAGGATGTGGCAAGTCCTACTGCGACGCCCGTTCACTgcgaaggcacaccgagaatcatCACAGTGCTGCCGGCGGactaggaggaggaggaggaggaggtggACTGTCGGGAGCTTCGACACCGACATCCAGCCCGACGGCATCGACTACGCTTTCCGCGATGACGATGGCCATGACGACGGCAACGGCTACGACAACGTCGATGACTACCGGCCCACTCAGTGGGCTCAGCCTCTCGCCGGCCACCGCCAGTGGTGATGCAAGTTCTCCCCATGGCGCAACCTGCAGCATCCAGTTCACTTCCGCACCGACAACGGCACTTAGTTCCACCAGCAGCAGCAACGGCAACGGCAACGGTTCCAACAGTTCCTCGTCCTCCTGCAGCTCCACCTCCGCTACTGGTTCTTCCAAAAGTTTAAACAACAGTAGCGGTGGGCATCTCAGCGAAACCGGTGCCATCAGCTCCAAGTCCCCGTCGCCGAGCTCGCCTGCCAGTGGCAGTGGCAACGAAGGACTGACCCGTCAACAGCTGGACCTAATTACGCAGATTATGCAGCAAACGAAGCAGGCGAACGCGGCCGCTGCCGCTGCCGGACAGAAAGTGCACCCCCGGCCACGAACGTGGAATATGCAGCTCCAGCTGAGCCAGCACAAAGTGAGCACCGCATCCGTGATTCCCTGCTCGATCTCCACCAGCCAAAGCAGTTCCCAGAGTAGTAGTAGCACCACAAGTTCAGCCACAATTGCCGCCACTAGCATCCAATCGACCACGGCTTCGGAGACGACCACCAACTCGATAGCGACGCAAAACTCCTCCACCGGCCATGCTCCGAACAAGACAGACCAGAAACCGGTCGAGTGTAACCTGTGCCATCGAAAGTTTAAGAACATCCCTGCCCTCAACGGTCACATGCGGCTGCATGGCGGTTACTTTAAAAAGGACACCGAAACGAAGAAATGTGATAAAAAAGAACATACCGGGCCGCCGCTGCAGACCGCCAGTGTCGGGGTTCGGGCCCTGATCGAGGAGAAAATCATCAACAAGCGAAGCAAGGATTTGAAGAATCTGTTGTTGAAGGGTTCGTTCGTGGTACCGGCAGCACCGTTAACCGCCCGTAGACTACTGGAAGCCAGTGAGGCTCTGCTAGCTCCCAAGACAGGAACGGTTGCCATCGTTTCCACCCAAAACGGAACTACGCAAATCATCAATCCGAAAGCAACCATCATGGCAACATCCGCCGCTGCTGGTGGTGGTACACTGACGACATCCAACGCTGCTGAAGTCAAAGATGCCACCTTGATTGAACTGTTGAAACGTGGTACCAAGGTGGCGGTGAAGCGTACCTGTTCCGATTCCGGTCAATTAGCAATTACAACGCAGGCAACTCAACCGTCGGTTGCCACGGCTGCCCATACCCGAACGGTAGTGCTTCCGGCAAACCTGAACAGTGCACCGTCCACACCAGGATCGACACCACCGTTGGCACTGTCAATTGCAAACAGTTTGACGACGAATGGCAGCTCGACGGTAACTGCTAACTGCGACTCTTCGCCTCTCTCACTTACAATATCACAAGCGCCTTCCGGCAGTGCGGATGTGTTCACTCTAGCCTATTCCACCGATGCCACCGGCGCTGCTGCCTTCTTTAGTGATAACGACGTGTACAGTGTTAGTGATACGACCATGCTATTGCAGGCCGTAGACTCGATACAGTTGCTCCAAGATCCCGCATCCAACGATCAGCTGGACGAGATTGCATCTCTCTCCGATTACACTACCATCAACGAGCAAACGTTTACCACTTCGCGGCAATTGCAGGCCGTACTGGATTCGCCACTTCCGGAAAGTCTGGCCGAATTCAGTGCTCTCCATTCCAAAGATTTCATTCTTTACGGCGGCGGCGCCAACGCTGGCAACACTTCCGATCCAACCGGTAGCCAAGCTTCCAATTCTCCACTACCGTCACCACTGGCCTATCCGACACCTCCGGCATCACACGAAGCTGTGGCGCAAGCATCTCCCTTCCTGGACGATTCCCGACACTTTTCCGATGCCAGTTCGTTCTTCGATGACAAACGTCCAACCTCTTCGGCTAACTTCCTCGACGATGGTTTCTTCAAAACGGACTCCAAAGACGTCAAATTGAGTGATGAAAAAATTCTCGCCCTGAAAAACGAGCTACTGGATGAGAACAACGATCTCTTCCGAAGCAACAAAAACATCCTGGACGATCACTGTCATGAGCTGTTCAAAAGTGAAGACAGTTTCTTTGTAGAGGAGTCTCCGGCTAGTAGCAAACAACCGTCGTCATCTTCGGCATCCGTCACCACCGTGGAAGAAGTTGGTTCACCATCGAAAATCAATCTGGACTTCCTGGACGAAGCTCAGGCATTTATCAACGAAAGTCGAAACGCTTCTTCGCCACTGTCGAATGCGTTCTTCTCGGCCACCATGTCAAGTGCGGAGGAAGTCAAGGAAGCCTTGGAGGAAGTGCTACCGAGCGATGAAGATGTGGTCATCGCCGAAGCCGACATCGATCTGTACTACCTGAACGGACTGACGTCACTGCAGTCGCAGATGATGTCCAACTCGGATGATCCGCTGCTGTCGTCATCACCGAAGGACTTTGCCCACCGGCAGCACCAGAAGTTTCTGTTCGAACAGCAGCAGGAAATTCTGGCAGGTCCGCAACCACCACCGAACAGTACCAGCAACAGCACCTTCTCACCACCGAGTgccaaaaaacagaaaactgagACAGATGCCTCGACGCTGACCAGCGTCGCCAGCAGTGATACGAACGAAATTCCACTAACCGTACAAACAGAGCAAATTCCAAAAGACAACCACAGTGACTCCGTGTTCCTTAGTCCGAGTAGTATCTCGTCTAGCAGCAGTGGCAGCAGCAGTTCACCAAAGCTCCAACATGCCTTGCTTCGGAAACGACCTTCCTTGATGCCTCCGACGGTATCGATCCGTAAGTCACCCAGCTATCACTCGAAGCTACGGAAATCTACATCGGCAGTTCCCGTTACGCACTACACTCCCCAGCCGATGTTGAATCCTGGCCGAACTGCTCCCGGACTGTACTCCGTAATCGCTTCCACGCTAGCCAATCATGCGAGCTGTTCAATGTCCGAATCGACCGTAGATAACACTTCGGATATTTTTAGCGAACCACCACTTCCCATTCGGCCCCGAATCAATCTCGGACACGACTACCAAGCTGCCATTCCGGACTGTATCACATCCAGCTACCACAATCAGCATGATCATCATAACCACAGTCATCCAGTGGATCAGCACATGTGGGATCCTGTGGTAGCTCAGAACGACGGCCAGATTGCTCGTTTCGTAGAATTGTCCCGTTCGTCTGCCGTGCCGCTGGGATGTCACTCCGAGGAAACGGCTTTGAAGTCACTACTGGAAGCGCAAGGAGAAATTCACATCGCCATCCTGAATCTAATGCAAACTCCACCGGCTGGCATCCATCGACGGTGGGCGGCAAACGAAATGGAACAGTTCATCCGAGGCCTCGAACTGTACGGGAAGGACTTTTTCCGAATAGCATCCGAACTGTTGCCGGAAAAGTCCACCGGTGACTGTGTCCAGTTGTACTACTTCTGGAAGAAACTTTGCGTGGACTACAAAACCACTCATCTGCTGCAGCATGGAGACAATTCGATGAAGTTCATCAACATGAACGTTAGTGCCGATGAGTTGCTACTGGACCACATCGGTTACACTACTAGCACTTCTGGTAGATCCGGATCCGGTGGTAGTGGTTCGAATGCTGCTACTAACGGCGGCAGTGACGTGCGACCGCACGTCTGTGAGGTTCCCGATTGTTCAGCGAGTTTCTCGTCGAAGGCCGCCCTGCACGGTCACATCCGTATTCACTGTATCGGACGGTCGGCAGTACACCTGAATGGCACTACGCAAAATGGTAATTTCTTGAGTACTACTGCCGCTGGTAACCCTATTAACCCTAACCACATACCAACAAAGGATGATTATCCCTGCAAGGTGTGCGGCAAGTAA
Protein Sequence: MIIILQAVPLSAISPAANQCAPFRNRKSTFGAEPLNVYRTLAADPVQSSVAMAMRFLYRSPFCVLAVQNSIRLPLAGLAPPRVLMCSASMGAEGSVTLQLREAVQAPDAAGTALSDHGGLTIGYPDPEMLADMLGSFQSASAAGLVEQQSSAVSGGSNFDLIQDSSSSNCSSRQSGLDPVEQQQQQHQNLTGTLLGKASSPTGCSSSSNTSGSKSNVSCNVNGSLTLSGGSIKSEMATKIDKLNGCIPVIGSASSSPSSSNCSTSSNSSNSNSCSSSNSSSKSTTAALAAVTAAASAANSANGSSTTVVSASAVAAAALVGGHSSRSDSTSSCSSNSSSSSSSSSSSSSSSNGSCGSSSGSGSSSVAVTVNGLPTVVKKPRPKTVSPTRHGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCGMCSKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSAAGGLGGGGGGGGLSGASTPTSSPTASTTLSAMTMAMTTATATTTSMTTGPLSGLSLSPATASGDASSPHGATCSIQFTSAPTTALSSTSSSNGNGNGSNSSSSSCSSTSATGSSKSLNNSSGGHLSETGAISSKSPSPSSPASGSGNEGLTRQQLDLITQIMQQTKQANAAAAAAGQKVHPRPRTWNMQLQLSQHKVSTASVIPCSISTSQSSSQSSSSTTSSATIAATSIQSTTASETTTNSIATQNSSTGHAPNKTDQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDTETKKCDKKEHTGPPLQTASVGVRALIEEKIINKRSKDLKNLLLKGSFVVPAAPLTARRLLEASEALLAPKTGTVAIVSTQNGTTQIINPKATIMATSAAAGGGTLTTSNAAEVKDATLIELLKRGTKVAVKRTCSDSGQLAITTQATQPSVATAAHTRTVVLPANLNSAPSTPGSTPPLALSIANSLTTNGSSTVTANCDSSPLSLTISQAPSGSADVFTLAYSTDATGAAAFFSDNDVYSVSDTTMLLQAVDSIQLLQDPASNDQLDEIASLSDYTTINEQTFTTSRQLQAVLDSPLPESLAEFSALHSKDFILYGGGANAGNTSDPTGSQASNSPLPSPLAYPTPPASHEAVAQASPFLDDSRHFSDASSFFDDKRPTSSANFLDDGFFKTDSKDVKLSDEKILALKNELLDENNDLFRSNKNILDDHCHELFKSEDSFFVEESPASSKQPSSSSASVTTVEEVGSPSKINLDFLDEAQAFINESRNASSPLSNAFFSATMSSAEEVKEALEEVLPSDEDVVIAEADIDLYYLNGLTSLQSQMMSNSDDPLLSSSPKDFAHRQHQKFLFEQQQEILAGPQPPPNSTSNSTFSPPSAKKQKTETDASTLTSVASSDTNEIPLTVQTEQIPKDNHSDSVFLSPSSISSSSSGSSSSPKLQHALLRKRPSLMPPTVSIRKSPSYHSKLRKSTSAVPVTHYTPQPMLNPGRTAPGLYSVIASTLANHASCSMSESTVDNTSDIFSEPPLPIRPRINLGHDYQAAIPDCITSSYHNQHDHHNHSHPVDQHMWDPVVAQNDGQIARFVELSRSSAVPLGCHSEETALKSLLEAQGEIHIAILNLMQTPPAGIHRRWAANEMEQFIRGLELYGKDFFRIASELLPEKSTGDCVQLYYFWKKLCVDYKTTHLLQHGDNSMKFINMNVSADELLLDHIGYTTSTSGRSGSGGSGSNAATNGGSDVRPHVCEVPDCSASFSSKAALHGHIRIHCIGRSAVHLNGTTQNGNFLSTTAAGNPINPNHIPTKDDYPCKVCGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -