Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058071.2:32390395-32392857[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 4.2 3.3e+02 3.2 2.0 1 23 403 428 403 428 0.83

2 8 0.022 1.7 10.4 0.7 2 23 433 455 432 455 0.95

3 8 3.7e-05 0.0029 19.2 1.4 3 23 466 486 464 486 0.96

4 8 0.014 1.1 11.1 3.1 2 23 491 512 490 512 0.96

5 8 0.13 9.9 8.0 0.3 1 23 518 540 518 540 0.98

6 8 2.3e-05 0.0018 19.8 4.7 1 23 546 568 546 568 0.99

7 8 0.00013 0.01 17.4 2.5 1 23 621 643 621 643 0.98

8 8 3.2e-06 0.00025 22.5 1.6 2 23 650 672 650 672 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	4.2	3.3e+02	3.2	2.0	1	23	403	428	403	428	0.83
2	8	0.022	1.7	10.4	0.7	2	23	433	455	432	455	0.95
3	8	3.7e-05	0.0029	19.2	1.4	3	23	466	486	464	486	0.96
4	8	0.014	1.1	11.1	3.1	2	23	491	512	490	512	0.96
5	8	0.13	9.9	8.0	0.3	1	23	518	540	518	540	0.98
6	8	2.3e-05	0.0018	19.8	4.7	1	23	546	568	546	568	0.99
7	8	0.00013	0.01	17.4	2.5	1	23	621	643	621	643	0.98
8	8	3.2e-06	0.00025	22.5	1.6	2	23	650	672	650	672	0.95

Sequence Information

Coding Sequence: ATGAAAAATCGAAGAATTCGAATGTGCCGCTTGTGTCTATCGACAACCGTGGTATTGCGgtcgatttttacaatattcaggaatcacAATCTGGTATTTATCATTCGAGATTTTGTCAACTTGGAGGTAAGAGAAGATGACAAGCTTCCAAAACTTATATGCAAATCATGTGCCGTCAAGCTtattcgcgttcgagaaaatgttacaTTATTCATCGAGAGCGATAAGAAACTACGAGATAAATTACAAGATGACGCTGAGTTACCGGATGTTGTGGATGAACTGCGACAAGACAAGAAGAGGAAATATAACCGCCGTAACGACGATAGTAACAATGACACGGAAGAAGAACGGATTGATGGCGAAGAGACTTTGGCAGAGATATCAATCAAGAAGGAGTCAGATTGTAAAgatgaaattttgaatgaaaacaaaacCTTAAATGTCCAACTGTTTGAATTCAACGAAGTTAAGGAGGAAATTTTGAACAGCGATGCAGAAGAAGATCTTCCACTGACGGTTTTTCGGAAGACGTCTAGCAACAACAGTAGTGCAGGTACTCAATCTGCTGTGACAGAAGGCAGCTTGAAAAATGAAAAGAGTTCAGCGGTTATACCccgagaaaaactagaaaataatgatgtatcttccaaatctacgcTAATGGTGAACAAAGTTGAGGCcgaaatcgaagatgacgatACGGCATTCACAAGTCCCATACATTCTGAATCAGAACATGAAACTTTGAATGTTAAAACAGTTGAAACACCGCGAGTGAAAAAACGGAGAATCGTTGCAAAAAGAGGAACGAAAAGAACCCGGAGTGAAAACAAGCAGTTAAAGTTTGAGATTGATTCCGATATGGAAGCAGATATAGACGACGATGAAGACAGAGATGAGACGTTTAAACTTATAATAGACGAGTCGAAACCAGGAAATGATGACACTGATGACCAATCTGAAGATGATTTGTTAGAAGCACAATTAAAAGACAAACCAGTTAAGAGGAAGAGAGGCAGGCCAAAGGGTATGGTTAAGCCACATAAAAAAAGAAGAGGCGGTCGCATTGCGAAAAAAACACTTCCTAAGCAAGACTCGGTACCATCGTTACACGACTACAAATGTTATATATGCAACAGTGAATCTCTGGGATCTAGGAAGGCTATGATTGAACATTTTTCTGTTCACATTGATAGGGTCCCGCACACTTGCAAAGAATGTGTCATGGAAACAGTGGTCCTAACCCGTGTTCGTACCTTAAACTCTCACATGAAGATGCATGCTCAACCTGTTAAATGTGACTATTGTGATCGTCGTTATAGTAATGCGGCCGGTAAGTACTATCATACACAAACATTCCACCTAGGAGGCGGTGCTCCCTGTTTGGTCAATTGCGAAATTTGTGGTAAAACTTGCGGATCGCAGACGGCTTTGAAACAGCACATGAAATATCATACAACTAAGTTGAAATGTAGTAAATGCGATATGGTATTTAATCATCCCAACAAGCGGAGAAATCACGAAAGATTGCATGATGAGAATCGCGGGTATGAATGTGTGGTGTGTAAAAAGGTTCTTCAAACGATTGAATCATACGATGTACATCTCAAGAAACATAGCCAGGAGCGCAGTTATCAATGTCATTTGTGCCCGAAAAAGTTCAATACTTCCTGCAACCTTATTTTGCACCTTAAGGTTCATGCCAAGAACGACAACTATAAACCAGCTAAGTCTTGGATCGAGCACTATACTGTGCTAAGTCGGAATCCAATGCACTTcaaatgcaatcactgtgaccgGTATCAAACAGACAAGGTGAACAACATGATATCCCATTTACAGGCCCATTTCAAGGAATACGAATGTGACCAGTGTCAGCACAAGTTTGCCACTGCCAAACAGCTGCGAGCACACTATACCACTCACACTGGTGAAAAACCAGAAAAGTGCAAATACTGCGAAAAGGTATTCTCCACCAAAAACAATCTCAGAATACATTTGAAGGCTTCACACCCGGAGTGGACTCCCCAACGGCAACAACAATTGTCTACGCCGGGAACGCAGTCAGAGTTAGCGGCAACATCGCAAACTCAACCCCAGTCCTCTGGAACCGCTCATCCGTCAGCATATGATAACTCTCCGGCAACATCTTCGCCGTTTACAGCCCCGAGTGAAACACAGCAAACTCAGCAGCTTACGTTCAGAGGCTTACGAAGTTAG
Protein Sequence: MKNRRIRMCRLCLSTTVVLRSIFTIFRNHNLVFIIRDFVNLEVREDDKLPKLICKSCAVKLIRVRENVTLFIESDKKLRDKLQDDAELPDVVDELRQDKKRKYNRRNDDSNNDTEEERIDGEETLAEISIKKESDCKDEILNENKTLNVQLFEFNEVKEEILNSDAEEDLPLTVFRKTSSNNSSAGTQSAVTEGSLKNEKSSAVIPREKLENNDVSSKSTLMVNKVEAEIEDDDTAFTSPIHSESEHETLNVKTVETPRVKKRRIVAKRGTKRTRSENKQLKFEIDSDMEADIDDDEDRDETFKLIIDESKPGNDDTDDQSEDDLLEAQLKDKPVKRKRGRPKGMVKPHKKRRGGRIAKKTLPKQDSVPSLHDYKCYICNSESLGSRKAMIEHFSVHIDRVPHTCKECVMETVVLTRVRTLNSHMKMHAQPVKCDYCDRRYSNAAGKYYHTQTFHLGGGAPCLVNCEICGKTCGSQTALKQHMKYHTTKLKCSKCDMVFNHPNKRRNHERLHDENRGYECVVCKKVLQTIESYDVHLKKHSQERSYQCHLCPKKFNTSCNLILHLKVHAKNDNYKPAKSWIEHYTVLSRNPMHFKCNHCDRYQTDKVNNMISHLQAHFKEYECDQCQHKFATAKQLRAHYTTHTGEKPEKCKYCEKVFSTKNNLRIHLKASHPEWTPQRQQQLSTPGTQSELAATSQTQPQSSGTAHPSAYDNSPATSSPFTAPSETQQTQQLTFRGLRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -