Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058071.2:46104591-46105715[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 4.9 3.8e+02 3.0 2.0 1 23 77 107 77 107 0.80

2 8 7.9 6.2e+02 2.4 1.6 1 23 112 133 112 133 0.89

3 8 0.0087 0.68 11.7 0.2 2 23 206 228 205 228 0.94

4 8 5.7e-05 0.0045 18.6 0.9 1 23 234 257 234 257 0.92

5 8 6.4e-07 5e-05 24.7 2.0 1 23 263 285 263 285 0.99

6 8 4.6e-05 0.0036 18.9 5.5 1 23 292 314 292 314 0.98

7 8 9.7e-06 0.00076 21.0 3.5 1 23 320 342 320 342 0.98

8 8 0.00013 0.011 17.4 0.7 1 23 348 371 348 371 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	4.9	3.8e+02	3.0	2.0	1	23	77	107	77	107	0.80
2	8	7.9	6.2e+02	2.4	1.6	1	23	112	133	112	133	0.89
3	8	0.0087	0.68	11.7	0.2	2	23	206	228	205	228	0.94
4	8	5.7e-05	0.0045	18.6	0.9	1	23	234	257	234	257	0.92
5	8	6.4e-07	5e-05	24.7	2.0	1	23	263	285	263	285	0.99
6	8	4.6e-05	0.0036	18.9	5.5	1	23	292	314	292	314	0.98
7	8	9.7e-06	0.00076	21.0	3.5	1	23	320	342	320	342	0.98
8	8	0.00013	0.011	17.4	0.7	1	23	348	371	348	371	0.97

Sequence Information

Coding Sequence: ATGTTTGGTTCGAAGTGCTCCTTCTACCTGGTAGTCAATGCTGTGTTCCCGTCTCGGTCGTTGACCATAACCGGTGCGGGTGCCCATATTCTTCTCATGCTATTCTATGTCTCTGCTTTGCACTATCTcgctgaacttttgtttcttacGCCGGTTCAAAACATCGAAATTCATAAAAAATCGTATTGTCCTACTTTCAGCAAACGCCTAACCCGTAGCTCGAAGGCCTTCACCTGCAGTTTCTGCAAAACGAACGGTACCATCAAGGCAAATACGTTCGCTAGCAAAGCCAGCCTGGTGGATCATCTGAAGGATCAGCACTCGGAGCAAATATTTCACTGTGAACAGTGTGACAACTATCTGGATCGAAATGTACTAATCCAACACATGACGATGCATGCGCTCAGCCTGTTTAGTCAAACCGGTGCTAACGAGTCGCAACCGGAGGACGAAGACGATCAGGAGCAGCAGACATCCGGGGTGGACCTGGAGGAAGGTGAAGGTAGCCAACAGACGGCGGAAGGTAAGTCCGGTGAGGGAACGGAAGTCGGTAACAaagaaaatgatgaaaagtcCCCACCACCGCCGGAAGTGAAAACTGAGTCTCGGAAACTGTACTGTTATATTTGTGAGAAAACTTTGGCAAACCGTAGCGCATACTCGTATCACATTAATCAGGTTCATTTGAACATAAAAAATTTCACCTGTACGTACTGTAGTAAAAAGTTTGGAAATCAGAGGCTATTGAAAAACCATGTTGCAGGGGTGCACTCTCGTGACCGCAACTACACGTGCCCAACCTGCTCGAAGCGGTTCAAAACGAATGTGGCACTGTACAATCACCAGCGCACTCACGACGATGGTGCGGTGAAATTTTCGTGTACGTTTTGCGATAAGAAGTTCCGGTACCGAAATCATCTCACTAGTCATCAGTTAATTCATATGAATGAACGAAACTTCCCCTGCACTCAGTGCGACAAGAAGTTCAACAATCCGGAGTGCTTGCAGAAACACAAGTTGACCCATGTGGAAACGCTTCCCTATCAGTGTCCGCTGTGCGGATTCAGTACCAAACAGAAACGCTATCTGGTGATGCATGCCAAACGGATTCACATGGTACGGTAA
Protein Sequence: MFGSKCSFYLVVNAVFPSRSLTITGAGAHILLMLFYVSALHYLAELLFLTPVQNIEIHKKSYCPTFSKRLTRSSKAFTCSFCKTNGTIKANTFASKASLVDHLKDQHSEQIFHCEQCDNYLDRNVLIQHMTMHALSLFSQTGANESQPEDEDDQEQQTSGVDLEEGEGSQQTAEGKSGEGTEVGNKENDEKSPPPPEVKTESRKLYCYICEKTLANRSAYSYHINQVHLNIKNFTCTYCSKKFGNQRLLKNHVAGVHSRDRNYTCPTCSKRFKTNVALYNHQRTHDDGAVKFSCTFCDKKFRYRNHLTSHQLIHMNERNFPCTQCDKKFNNPECLQKHKLTHVETLPYQCPLCGFSTKQKRYLVMHAKRIHMVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01525314;
90% Identity: -
80% Identity: -