Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058071.2:16131119-16134124[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.033 2.6 9.9 2.9 1 23 62 85 62 85 0.95

2 14 0.16 12 7.7 0.3 1 12 92 103 92 112 0.92

3 14 0.084 6.6 8.6 1.3 1 23 120 143 120 143 0.91

4 14 0.012 0.97 11.2 0.2 2 23 194 216 193 216 0.96

5 14 0.072 5.7 8.8 0.2 2 23 226 248 226 248 0.95

6 14 0.00061 0.048 15.3 1.6 1 23 254 277 254 277 0.97

7 14 0.042 3.3 9.5 0.6 1 23 283 306 283 306 0.88

8 14 0.00094 0.074 14.7 0.2 2 23 341 363 340 363 0.95

9 14 0.04 3.2 9.6 7.3 1 23 405 427 405 427 0.97

10 14 0.096 7.5 8.4 2.6 1 23 429 451 429 451 0.95

11 14 0.029 2.3 10.1 0.1 2 23 458 480 457 480 0.95

12 14 0.0003 0.024 16.3 0.9 1 23 491 514 491 514 0.95

13 14 0.27 22 7.0 1.7 2 23 522 544 521 544 0.96

14 14 0.0011 0.085 14.5 1.8 1 23 551 573 551 573 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.033	2.6	9.9	2.9	1	23	62	85	62	85	0.95
2	14	0.16	12	7.7	0.3	1	12	92	103	92	112	0.92
3	14	0.084	6.6	8.6	1.3	1	23	120	143	120	143	0.91
4	14	0.012	0.97	11.2	0.2	2	23	194	216	193	216	0.96
5	14	0.072	5.7	8.8	0.2	2	23	226	248	226	248	0.95
6	14	0.00061	0.048	15.3	1.6	1	23	254	277	254	277	0.97
7	14	0.042	3.3	9.5	0.6	1	23	283	306	283	306	0.88
8	14	0.00094	0.074	14.7	0.2	2	23	341	363	340	363	0.95
9	14	0.04	3.2	9.6	7.3	1	23	405	427	405	427	0.97
10	14	0.096	7.5	8.4	2.6	1	23	429	451	429	451	0.95
11	14	0.029	2.3	10.1	0.1	2	23	458	480	457	480	0.95
12	14	0.0003	0.024	16.3	0.9	1	23	491	514	491	514	0.95
13	14	0.27	22	7.0	1.7	2	23	522	544	521	544	0.96
14	14	0.0011	0.085	14.5	1.8	1	23	551	573	551	573	0.99

Sequence Information

Coding Sequence: ATGGACACCACGACGACGAACGACGTGGTTGATTTGTCCGCCACCAGTGAGTACCGGTCGGCGAACAACAGCTCAACCTCGATGTCCGTATTTGACGTTCAGATCAAGGACGATCCGGACCAAATGGAAGACATGGACAATGACTCAGAGGATGAAACCTACATTCGACTGGAGAACCGGTTCTACCAATGCCGTGTCTGCTCCGAAACATTCCGCCATTTGCTGCAAATCCGCAAGCACACCAAGGCCCAACATCCAACGGAGTGGAAGAGCTTCAAATGTGAACACTGCAAGCGACGATTCCCTTCGGCGGCGATCCGCGATCGCCATGCCCATTTCCATACACTCAACCATCCGTTCAAGTGTACCGATTGTGATCAGATGTACGATTCAAAGCGACGAATTGAGCAACATTTCGCTATGTTCCACGACATACATTCCAGCAGCTTCTCCGTTGATCGCATTCAATGCGAACCTTGCAATTTGTGGTTTGTTGAGAAAAAGTATTATGATTTGCACTCGAGAATTTTCCACCAGCGGAAACCGCAACGTTTGAAGAACTTGACCGACACCATACAGGTTTGCGAGAGATGTTTGGCCACCTTCAGCTCCCGTGAACTGTTGGTGGATCACATCAAAAAGGTTCACGTGTCCGATCCTCCTCTGAAAAATCCCGAATGTCCACGATGCTCGAAGGATTTGAAAACGATGACCCTGCTGCGAATCCATCTGCTTGTCGTTCACTTGGGCATGCTACCGTTCGTTTGTCAACATTGCAGCGCTGCATTCGCCACTCGCCATTGGCTGCTGAAACACATCGAAAAAGAACACACCGAACTTCCGGTTTTCAATTGTCCCTCGTGTGATGAAACATTCACCGACGAGCAGAAGCGTAACAAACATGAAACCGAAGCACATCAACCACCACCACCTTCGCCACCTCCTCCACCACCGCCACCGCTTCCACCTGCACCGGTAGTTGGTAAGGCATTGAATATCTTTGCCGGTTCCGAAATGATCCCCTGTACGAAATGCGACAAAAAGCTAGAAACGAAAGATCTCCTGGGAAAACATATGATAAAGGCCCACCCGGCATTCATGCTGTTGTACAAATGTCCACTGTGCGTGAAACCGATTCGCTACCGTAAACAGCATATGCGTGTCCATCACGATGTCGAGTATGAACCGAAGGAGCATCATTATCAGACCCGGTACAAATGTCACTGCTGTTCGAAGCTGTTCAAGCAGAAACGCAATCTCACCTCTCATCTTATGGCGCATCCTTTCCATTGCGATAATTGTATGATGCGTTTCAAGACCAAGAAACAACTGTCGGCCCACTCGGCCGTacatcgaaccagtcgttcgtTGAAATGCGCTGATTGTGGTCTGGAATTTGGTTATCCGGCTAGGCTACAGGAGCACCGTACTCGCTTCCACAGCAGTACCTCAACGGAGGTACTTAAATTGCACAACTGCCCGTATTGTCCGAAGATTTTCATGAGTTTGTCCAACCGCGAACGCCATATTAGCGTTACTCATCCACAGAACGATTTCCAGGTACGGTGTGGTCATTGCGATCTGGAAAAGACGGACAGTATGTCCCTGCGGAAGCACTACAAAAtggatcatccaaatgatcggGTTACGTTCAAATGTTCCGAGTGTGATAAAGTCTACTTGAACTTGTCCAGCTACAAGGATCACCTGAAAAAGCATACCGCCACTGGGAAGGTCCGAGGGGACAGTACCAGCTCAGCAACGGCGAATGGCGAAGAAAACACATCCCTCACGGAGGGCTCTACGTCTGCGGGAGcggaaaattcgtccaagatacTGTCGGAAACCGAGATAAAGGTTGAAGAAACCAAACTGATGCCATCTGATGGTGCAACAACGGCGACGGAAATTGTGCAAGAACCGGAAATAAAAGaggaagaaattgaaaaaataccATCCGACGGTGTAACCGTCGGTGACAACGACGAGGTGAACGTGGTGGAAGCTAAggaaaacgaacaaacgaatGAACCAGAACAGCAAATTACGGTCAACAACAACACGAACGATCAAATCAATGAAAGTAAAGTGCAACAACCTACAGAAGAAGAGAAGCAAGACATTGATCTTGTTACTATTAAACAGGAACAGATAGATATTGGAATTTCAAACACATTAGTACAGCAGCAAGAAGAGGAAGACAAAAAAGAAGAGGAAGAAGAAAAGGAAGCAGCAATTGATGGAGAAACCGTAGCAGGAACATCAACATTGCCGGACACAGAAACAGATAAATCGGAAGAGAATGTGGCAGATAAAATCATCGAACTGGACTCTGGAACAACATCTCCATTTACGGTTGACGAAAAGGAGATCAACGAACAAGGTGATGTTGAGATTGTACCAGAGACCAAACCAGTTCATGTTGAGATTGTACCAGAAACTTCTCAGGTTATTCCGGAAAAAATTACTGCAATCACGATTAAAAGAGAAGTGGTCGTATCTATTGAACCACTGAATTATGCTCATGACACACTGATTATACCGGTACCAAAACCAAAGGCAATCGCTGCAGCCGCCCTGATTTCCAAACGAGAAAATTCACCTTCAACTAATTCTGAGCGAATTGATTCTGGGTCAATTGACACAACATCCGAAAAGAACAAGTCAGGAGCAGCTTTCGAAAGAGGTGTTAATGATGATGTCAAAGCGACCTCACCCGTGGAGTCCAATTGTACTGAGACCGAGGTAAAACAGCAGCCCAAagagaaaaactctggccctagcACAGCGGAGGAATGTGGTGATGAATCGGAGATGAAAAGAAAGAAAGATGGTTCATCCGAGAAAGGCGAATCCGAACCGGCAGCAGTTGGAGGAGGGGCCGTCAGATCGTCGATGCGCTTGGCTAGAGCCAAAGCCAACTCCGAACCGGTGGCTGAAAGTAGCAGCGAGAAACAGCCAACGGCCAAACGAGTGAAGACAGAACAACCGTCGGACGATGCTTAG
Protein Sequence: MDTTTTNDVVDLSATSEYRSANNSSTSMSVFDVQIKDDPDQMEDMDNDSEDETYIRLENRFYQCRVCSETFRHLLQIRKHTKAQHPTEWKSFKCEHCKRRFPSAAIRDRHAHFHTLNHPFKCTDCDQMYDSKRRIEQHFAMFHDIHSSSFSVDRIQCEPCNLWFVEKKYYDLHSRIFHQRKPQRLKNLTDTIQVCERCLATFSSRELLVDHIKKVHVSDPPLKNPECPRCSKDLKTMTLLRIHLLVVHLGMLPFVCQHCSAAFATRHWLLKHIEKEHTELPVFNCPSCDETFTDEQKRNKHETEAHQPPPPSPPPPPPPPLPPAPVVGKALNIFAGSEMIPCTKCDKKLETKDLLGKHMIKAHPAFMLLYKCPLCVKPIRYRKQHMRVHHDVEYEPKEHHYQTRYKCHCCSKLFKQKRNLTSHLMAHPFHCDNCMMRFKTKKQLSAHSAVHRTSRSLKCADCGLEFGYPARLQEHRTRFHSSTSTEVLKLHNCPYCPKIFMSLSNRERHISVTHPQNDFQVRCGHCDLEKTDSMSLRKHYKMDHPNDRVTFKCSECDKVYLNLSSYKDHLKKHTATGKVRGDSTSSATANGEENTSLTEGSTSAGAENSSKILSETEIKVEETKLMPSDGATTATEIVQEPEIKEEEIEKIPSDGVTVGDNDEVNVVEAKENEQTNEPEQQITVNNNTNDQINESKVQQPTEEEKQDIDLVTIKQEQIDIGISNTLVQQQEEEDKKEEEEEKEAAIDGETVAGTSTLPDTETDKSEENVADKIIELDSGTTSPFTVDEKEINEQGDVEIVPETKPVHVEIVPETSQVIPEKITAITIKREVVVSIEPLNYAHDTLIIPVPKPKAIAAAALISKRENSPSTNSERIDSGSIDTTSEKNKSGAAFERGVNDDVKATSPVESNCTETEVKQQPKEKNSGPSTAEECGDESEMKRKKDGSSEKGESEPAAVGGGAVRSSMRLARAKANSEPVAESSSEKQPTAKRVKTEQPSDDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -