Mgen024535.1
Basic Information
- Insect
- Malaya genurostris
- Gene Symbol
- zfy1
- Assembly
- GCA_030247185.2
- Location
- CM058072.1:340722220-340725129[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.031 2.5 9.9 0.1 2 20 232 250 232 251 0.94 2 14 0.0019 0.15 13.8 0.2 1 21 259 279 259 280 0.95 3 14 0.039 3 9.7 0.6 3 21 439 457 437 458 0.94 4 14 0.03 2.4 10.0 0.2 2 20 466 484 465 486 0.93 5 14 0.0054 0.43 12.3 1.3 2 23 574 596 574 596 0.96 6 14 0.004 0.32 12.7 1.7 1 21 636 656 636 661 0.94 7 14 1.6 1.2e+02 4.6 1.1 1 19 690 710 690 715 0.87 8 14 0.61 48 5.9 1.7 2 20 732 750 732 752 0.92 9 14 0.00045 0.035 15.7 0.2 1 23 758 781 758 781 0.95 10 14 0.0026 0.21 13.3 0.1 1 23 788 810 788 810 0.97 11 14 5.9e-05 0.0046 18.5 0.2 2 23 817 839 816 839 0.95 12 14 3.6e-07 2.8e-05 25.5 0.4 1 23 845 867 845 867 0.97 13 14 0.19 15 7.5 2.7 1 23 873 896 873 896 0.96 14 14 2.1e-05 0.0017 19.9 0.3 1 23 902 924 902 924 0.99
Sequence Information
- Coding Sequence
- ATGGAAGACCAGACGGAAACCTGCCGATTTTGTAGATGCGACGGCGGAGCATCCCTCAAAGGAATGAAGTCTATTTTCGATGTTGATGGAGGCACACAGATAGCAATCATGATACGTGAATTGGCCGATGTGGAGCTTTTCAGTGAAACACACCGGTCTGAATCGATCTGCATTGCTTGCCTCAATAAAGTGAGAACCGGTTATCTTGTTCGGAGAATGATTCGCGAAGCGGAAGGAATGATAGAGGAAAATGTAACAAACTGTTCTAGAAGTGGACCGGAATCATTACAAGACGAATTTATTGCCGAAAATGAAATTAAACTAGAGCAGATGGGGACTAATGATGACGAAAATAATGACGGGTTTTTCTATGAGTATTTAGAAGATGAAAATATGGATGAGGACGGTTTTGATACGGCTCCAATTACGACGGATGACGGTGCCAAACGTTCCGCAGAAGTCAGTTTGTCTAGCGCCAGTAAAAAGCTCTGCCTTCAGCGGACATACAGGAAAAACAAATTCACGATGCCCCAGGAGCCGACCGTGCTGCGGATTACTGACCGGATCGATCACTTCGTAGTGGAAGTTAAAGGTGATCGATGCTGTGGCTGCTGTTTCGTTGGGTTGACGAGAAAGGAACTGCTGCAACACTCGAGTCAGGCTCACTGCATCGAAATTGTCGGCAGTGGGAATTACTGTCCGATTTGTTTCTTCAAATTCGCCACCGAAATCGACCTGACAAGGCACGTCGACGATTGTAAGTCGAAACACATATTTGTAtgtaaaatttgtgaaaaatatttcaaccaGCAACGTCAAATCGAAGCTCACTTGCAACTTTGTCGGAATGCCGACGTAAATTGCCAAGAAGAAGATTTTTTCATCATGACGGATGACGAGTACGATTACACAGATGCCGATGTGACAGACTGTAATAGGAGCAAAAGGAGTGAGGACGAGACGCATGGCAATCAGACCGACATCAATGACGACAGTGACGATCGCGACCAGGCATGGAAAACGGATGACGAATGTGAATCTCGTATGGACGAAAGTTCTACTCGATACAGTCCTAAAAAGAGGAACTATATATTCAATGATTCCTTCCATACGGCTGACTGCCATGGCGTCGAGACTATCGATATACCAGAATCACTGGTGGTGCATCGCCTTACATTCAAAACATTTCAGTATTTAAAGCTGAACGGTGAAAGATGCTGCGGTTGTGACTTTACTTGTCTCAAGCGAGAGCAGGTGTTTCAGCACGCGAAAGACACACACCAAAAAGACGTCGACTTGAACAACGAATCTATCTGTCCCATTTGCTATTGTCGCTTCGCGGACGACAAGCAGCTTTCGAAGCACATTAACTTCATCACCAGCAAGGATGTACTGATCTGTTTGATTTGCGATGAAGGTTTCACCGGAAAAGGTTCCCTCAAGTATCATCAATTTCACAGCGAAAAGCACAAGCAAAACTTGTTGAGTTCGTGCGATGgcaaaaaaatcgataaaaCCACGTTGGTCGAACTGAACGATATCGATGTGATGAAAGCGTTCGACAGTGAAGTGACCGATGCGATAGCAAACCCGAAGGTTCGGTCGAGAAACAATAACCGTTCGCTAACAAGACATCGCCATCTCACCATGCCCGATCCGATATTCATAGTCCAAGTGGACAAATATGACAAATACGAAGCCATCACAGTGACGGGAGAACGCTGCTGTGGTTGTGGACAATTTTTCGAAACGTACAATGAACTGATTCAGCACGGACGAAGAATTCATCTCATCGACAACGCGGACGCGGTGGGCGAATATCAGTGCGACATTTGCTACGGGCGTTTCGAATGGGACCGGGGACTGTTGATGCATCAAAATACTAGACGATCGATTAGTAAATTATATCACTGTACGATTTGCCAACTAGTTTTCTCCAAGCAACATACCATGGCAAAGCACCTACAGAATGCGCCAAACCACTCGGATATTCCAACGGATTATACTACTGAGAatataaaattggaaaaacagGCACCGGAAAAACCAGGTGTTACCAAAAACAAGTATGTCTGCTGTTTACCAAAGTGTGCCAAAGAGTTCACTACCGAAGGGCTGCTACTGGAGCATTGTGCTGTGGACCATTCCGGTAAACGACGTGAAAACGAAGCAGAACGCACCAGTGATGCCAACGTTTGTCCCGGTTGTTGCAAGTCGTTCGAAAATGCCACCTGCCTCGTGTGGCATCGATTCACCCGTTTCACGAAGCAATACGCATGTCGCTTCTGTGGTCAAACGTTCTCCCGTTGGTCCGCAAACCGAGAACATGAAAACATCGTACATCTGAGGAAAACATCCGAATTCCCTTGTGAGACATGCGGCAAGGTGTTTCTGACGGCACAACGGCTCAAAGCTCACCGGGAAATTCATTCCGATTTGCGGCAGCAGGTGTGCGGTGATTGCGGTGCCAGTTTTCGCAATAAGGGCGTCCTGAAACGACACCGGCGCGCTGTCCATTCCAACGATTATCCATTCGACTGCAAACTGTGCCCGAAAAAGTTTCCCACCCAGGAACAGCTGAATGCCCACATGCGGGTTCATACCGGGGCCAAACCGTACCCGTGCCGGTTTTGTGAACGAGCGTTCGCTCACTTCACCGATCGGAAGCGACACGAGATGTCAACCCACACCGGAGAGCGACCGTTCCAGTGTCCACACTGTCCGGCGGCCTACATCCGGAATCGGGAACTGGCGATACATATGCAAAAGCATACGGAAGATAATGTCGTTTGA
- Protein Sequence
- MEDQTETCRFCRCDGGASLKGMKSIFDVDGGTQIAIMIRELADVELFSETHRSESICIACLNKVRTGYLVRRMIREAEGMIEENVTNCSRSGPESLQDEFIAENEIKLEQMGTNDDENNDGFFYEYLEDENMDEDGFDTAPITTDDGAKRSAEVSLSSASKKLCLQRTYRKNKFTMPQEPTVLRITDRIDHFVVEVKGDRCCGCCFVGLTRKELLQHSSQAHCIEIVGSGNYCPICFFKFATEIDLTRHVDDCKSKHIFVCKICEKYFNQQRQIEAHLQLCRNADVNCQEEDFFIMTDDEYDYTDADVTDCNRSKRSEDETHGNQTDINDDSDDRDQAWKTDDECESRMDESSTRYSPKKRNYIFNDSFHTADCHGVETIDIPESLVVHRLTFKTFQYLKLNGERCCGCDFTCLKREQVFQHAKDTHQKDVDLNNESICPICYCRFADDKQLSKHINFITSKDVLICLICDEGFTGKGSLKYHQFHSEKHKQNLLSSCDGKKIDKTTLVELNDIDVMKAFDSEVTDAIANPKVRSRNNNRSLTRHRHLTMPDPIFIVQVDKYDKYEAITVTGERCCGCGQFFETYNELIQHGRRIHLIDNADAVGEYQCDICYGRFEWDRGLLMHQNTRRSISKLYHCTICQLVFSKQHTMAKHLQNAPNHSDIPTDYTTENIKLEKQAPEKPGVTKNKYVCCLPKCAKEFTTEGLLLEHCAVDHSGKRRENEAERTSDANVCPGCCKSFENATCLVWHRFTRFTKQYACRFCGQTFSRWSANREHENIVHLRKTSEFPCETCGKVFLTAQRLKAHREIHSDLRQQVCGDCGASFRNKGVLKRHRRAVHSNDYPFDCKLCPKKFPTQEQLNAHMRVHTGAKPYPCRFCERAFAHFTDRKRHEMSTHTGERPFQCPHCPAAYIRNRELAIHMQKHTEDNVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -