Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058072.1:258429523-258431377[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00012 0.0096 17.5 2.1 1 22 281 302 281 302 0.96

2 10 0.00024 0.019 16.6 1.9 1 23 309 332 309 332 0.95

3 10 0.048 3.8 9.4 1.8 1 22 349 370 349 372 0.87

4 10 0.0025 0.2 13.4 1.4 1 20 385 404 385 406 0.94

5 10 0.0003 0.023 16.3 0.2 1 23 413 435 413 435 0.97

6 10 0.00079 0.062 15.0 0.1 1 23 441 463 441 463 0.98

7 10 1.3e-06 0.0001 23.7 0.9 1 23 469 491 469 491 0.98

8 10 0.00021 0.016 16.8 1.8 1 23 497 519 497 519 0.96

9 10 0.00027 0.021 16.4 0.9 1 23 525 548 525 548 0.97

10 10 2.3e-06 0.00018 23.0 1.1 1 23 554 576 554 576 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00012	0.0096	17.5	2.1	1	22	281	302	281	302	0.96
2	10	0.00024	0.019	16.6	1.9	1	23	309	332	309	332	0.95
3	10	0.048	3.8	9.4	1.8	1	22	349	370	349	372	0.87
4	10	0.0025	0.2	13.4	1.4	1	20	385	404	385	406	0.94
5	10	0.0003	0.023	16.3	0.2	1	23	413	435	413	435	0.97
6	10	0.00079	0.062	15.0	0.1	1	23	441	463	441	463	0.98
7	10	1.3e-06	0.0001	23.7	0.9	1	23	469	491	469	491	0.98
8	10	0.00021	0.016	16.8	1.8	1	23	497	519	497	519	0.96
9	10	0.00027	0.021	16.4	0.9	1	23	525	548	525	548	0.97
10	10	2.3e-06	0.00018	23.0	1.1	1	23	554	576	554	576	0.99

Sequence Information

Coding Sequence: ATGACTACGAAGATATATACGTTGGCTTGTCGTATCTGCACCCAAGCAGATACGGACGATATGGACTCCCTGTACGATGTAACAACAGAAGGATGGACGCCTGCCCAATTAATTGAGGATTGTTTTGGTATCACGATGAATTCGGAAGATGGACTACCAACAAAGTATTGTCAAAATTGCAAGGAAGATTTAATAGGTGCTATTCGTTTTCACACCCGGTTACAGGAGTCCGAAGCCAAGTTCATAGATCTGATCGCTATGCCGAAGATTGAAATAAATGAACCAATTGATGGCACCATTTCATCAGTATTTATTTCGGAAATGTTTATCAAAACCGAGGATGACGACCAATCGGATTGTGAAGAAATGCCATTAAATGACGAGTCCTCATTGgaagaaattgaaacaaatgaaCCACAAAAGTATAAGACGCAGAACAAACGCAGGAAGAAAAAATGGTTATCAAATGAAGATGTCTCTAAATCAGACATTGAATTGGCAGTAGACGCTTCTGTTGATCAGAAACCTACTGTTGAAGAAGTAGAACCAGATACTTCGAAACCGGCTAAAAAGCGATGGACGGAATTTAAATTCTCAGACAGTTTATCTAGTGATGATAATTTCTCTGATTATGATAGTGCACAAAGTTCCGACAGCGACGCAGAAGAGAAACCTAAGAAAAAGCGACTGTATTACGGAGTGAAAGCTGATTCACTACCGAAACGGTGTTGTGGTTGTAAGGATATGCCTTTGGACAGTCACGAAAAAGTGCAAGAGCATTCCGATAAATATCACTATAGATATCGAATAACTAACACGagagaaattgaagaaaatccgtTTGAATGTCCAAACTGCTATAAACGGTTCGATTCAAAAAAAGAATTTCTACGTCATCAACGTAAAATGTATGTTGAAAGATTGCATCCGTGCCCTAAGTGCGACGAAGAGTTTGCAAATCATTATGTACTGCAAAGACATCTCAAACTGTATCATAAGAAGAAGATGATAATTGAAAGAATGGAAGAGTTGCGCCAGGAATCACATATCTGCTGTGCTTGTAAGAAAAAGTTTGATTCTAATGAACTTCTGAAGGCACACGCGGATGAAGTGCATGTGAAAGAACGCAACACGTATGAAGGGGATTTCGAGTTCGAATGCGAAGTTTGTTACCGGCGCTTCAAAACTCGACAGTCTATGAAAGTTCATCAATATAGAATGTTCAAAGGAAAGAAGTTTATTTGTGCCCTTTGTGGAAAAGCCTTTAAAGAAAAGGCTTTTCTTCGAGACCACGAAAATTCTCATCGACGAGAAAAACCATACGAATGTCCTAAATGCGATGCACGTTTTTCTATCAAAGGATCTTATGATGCACACGTGAGATTGCACGATGCAAAGGACGAATTCAAATGTGAATACTGTGGTCGTGGATTTCGGACAAAAAGTCTACTAAAAGGACATCTGACTGTTCATTCCGAGGATCGTCCGTTTAAATGCCATCTGTGTCCAATCACTTTTACACAACAACGACTGTTGGATTctcatattgaatttcatctaggCAATAAACCGTTCAAGTGCCAGCAATGTCCGGCGTCGTATCGATACCAACGAGACTTGAGAGGCCATATTCGTGAGAAGCACGAGGGCATACTAAGTTTCCAGTGCACGTATTGCCCTAAAGCATTTAATCGAAAGAAGCCATTGCTAGTGCATCTTAAAACGCATGAAGCTATCTAA
Protein Sequence: MTTKIYTLACRICTQADTDDMDSLYDVTTEGWTPAQLIEDCFGITMNSEDGLPTKYCQNCKEDLIGAIRFHTRLQESEAKFIDLIAMPKIEINEPIDGTISSVFISEMFIKTEDDDQSDCEEMPLNDESSLEEIETNEPQKYKTQNKRRKKKWLSNEDVSKSDIELAVDASVDQKPTVEEVEPDTSKPAKKRWTEFKFSDSLSSDDNFSDYDSAQSSDSDAEEKPKKKRLYYGVKADSLPKRCCGCKDMPLDSHEKVQEHSDKYHYRYRITNTREIEENPFECPNCYKRFDSKKEFLRHQRKMYVERLHPCPKCDEEFANHYVLQRHLKLYHKKKMIIERMEELRQESHICCACKKKFDSNELLKAHADEVHVKERNTYEGDFEFECEVCYRRFKTRQSMKVHQYRMFKGKKFICALCGKAFKEKAFLRDHENSHRREKPYECPKCDARFSIKGSYDAHVRLHDAKDEFKCEYCGRGFRTKSLLKGHLTVHSEDRPFKCHLCPITFTQQRLLDSHIEFHLGNKPFKCQQCPASYRYQRDLRGHIREKHEGILSFQCTYCPKAFNRKKPLLVHLKTHEAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00949077;
90% Identity: iTF_00949077;
80% Identity: iTF_00949077;