Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058072.1:297794396-297798215[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.8e-05 0.0053 18.3 0.7 1 23 181 203 181 203 0.95

2 15 0.04 3.2 9.6 3.0 1 23 209 231 209 231 0.96

3 15 3.5e-05 0.0027 19.3 0.2 1 23 346 368 346 368 0.98

4 15 0.22 17 7.3 0.5 1 23 374 397 374 397 0.96

5 15 0.00019 0.015 16.9 0.5 1 23 435 458 435 458 0.96

6 15 0.031 2.4 10.0 0.0 2 23 501 522 500 522 0.94

7 15 6.4 5e+02 2.7 0.6 1 23 528 551 528 551 0.94

8 15 0.046 3.6 9.4 1.6 2 19 559 576 558 577 0.95

9 15 0.00077 0.061 15.0 6.4 1 23 590 612 590 612 0.95

10 15 0.11 8.5 8.2 0.5 2 23 618 639 617 639 0.97

11 15 1.4e-05 0.0011 20.5 0.4 1 23 645 667 645 667 0.98

12 15 0.0089 0.7 11.7 0.2 3 23 675 695 673 695 0.97

13 15 0.00065 0.051 15.3 0.5 3 23 703 723 701 724 0.95

14 15 0.0073 0.58 11.9 0.2 1 23 738 760 738 760 0.96

15 15 0.013 0.99 11.2 0.0 1 20 1209 1228 1209 1231 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.8e-05	0.0053	18.3	0.7	1	23	181	203	181	203	0.95
2	15	0.04	3.2	9.6	3.0	1	23	209	231	209	231	0.96
3	15	3.5e-05	0.0027	19.3	0.2	1	23	346	368	346	368	0.98
4	15	0.22	17	7.3	0.5	1	23	374	397	374	397	0.96
5	15	0.00019	0.015	16.9	0.5	1	23	435	458	435	458	0.96
6	15	0.031	2.4	10.0	0.0	2	23	501	522	500	522	0.94
7	15	6.4	5e+02	2.7	0.6	1	23	528	551	528	551	0.94
8	15	0.046	3.6	9.4	1.6	2	19	559	576	558	577	0.95
9	15	0.00077	0.061	15.0	6.4	1	23	590	612	590	612	0.95
10	15	0.11	8.5	8.2	0.5	2	23	618	639	617	639	0.97
11	15	1.4e-05	0.0011	20.5	0.4	1	23	645	667	645	667	0.98
12	15	0.0089	0.7	11.7	0.2	3	23	675	695	673	695	0.97
13	15	0.00065	0.051	15.3	0.5	3	23	703	723	701	724	0.95
14	15	0.0073	0.58	11.9	0.2	1	23	738	760	738	760	0.96
15	15	0.013	0.99	11.2	0.0	1	20	1209	1228	1209	1231	0.93

Sequence Information

Coding Sequence: ATGGATCAAACTACGTTTACAATTTGGGACCCATCTCAACCTAATGCAAAGATGCGAATCATAAACATTTCCGGCAAAGGCACTACACAGTTAGTTGAATCTATTCCCGGAATCGATAAAGCTACCGGGTCTGCATCAACGGGAACCGAGCAAATTATTTTCCAGACTCACAACGGCCAAGAGTTTCTTGTTGATGAAAACGAAATTAGTCGAATTGATCAGATTCCACCAGAAAATTTAATCTACATGGCTGCAGATGATGGTTCGCTCATTCAGGGTGAAGTTGTTCATGTCCAAGAGGAAGAAGGAATCGCTGATCAACAAATTCACAACGACATAGTTGTTCAGCAGGGAGAGGAATACATGGAATGCGAGGTAACTGAGGAGGTGATTACGGACGACTGGGTTCAAACGGATGGACAGGATTGTGTCCAGGTTACCGTCGATCAGTTGGGAGCTACGGCAGTGATAGGTGCAGTAGAAGACGAAGTCACCGTTCCGCTTCCCACAGATCAAGACGAGTACACAACATCTCGTCCGTATCCCTGTGATTTCTGTAGCCGTCGTTTTCGGAAGAAGGCAAACCTGATGAATCACATGGTTGCTCATTCGAATGATAGACCCCACATATGCAATCTCTGTGGAGCACGTTATATGCGAAGGTGTGATTTACTAAATCATTTAAAACTCCACGCCTATTCCACCGATGAGCCGGAGGAACCATTGAGAAGTGATCCGGAGGATGATTATAGGTATGAATTCAATAACACATCCTCGAGAGAACAAGAAATGCGTTCCCCATCAGTGGAAGAGGATGAAGAACTACTGGTTCCTGCTGCAACTCAATACAGAACACCAAAATTAAAACCTGCAAGAAAACCACGTGCCAAACCCACTGGAAGTGCTGGGCGATCAATGAAGAAGTCCACTCCAATTAACCATCGCTCTCagcaatttgaaaataaattcagCGTTTCTGTTGAGCCTTTCGTGAATCTTCGTCCTCGGTTCCCGGTCACAGACGAGCGAAAGCCGTTCGTCTGTCAGCATTGCGGAATTTCTTTTGCGCGAGAGAAAGCTCTTGCCTCGCATGCCCGCATTCACGGAGGAGACTGCCAATTTGAATGCGAATCGTGCGGTGACCGGTTTTGGGACAAAACTATGCTGCAGAATCATGTACGGCAACGACATGCCGCGAATTTAGTAGTCGCCTGGACTGAACAGTCAGGTTCTACAGTGTACAACACAGAACTTCCCGAAGCGGTTGAACTGAACGCTGATGATGAAAGTAATGAGCGGCACTATTACTGTGACAGTTGTGGAGTGATATTTCAGAAGCAAGATCAACTCAAGCGCCACATAAAGCAAGCTCACGGTGTGAAGGAGCAAAAATGCGAAATCATTAATCAGATTGTTCAACAACATTACCAGCAACCGTTGGTAGAAGACGATGAGGAAAGTGGGGACCAGTGTGATGAAGATGAGTCACAACAGCCATTATCTTGTAATGTATGTGGTGAGAAATTTGCTGAAGCATTGGATCTACTAGCTCATGCAGAGGTGCACACTCGTTCTGAATCTCACAAATGTCAACTATGCATAGAAACGTTCGTCGACGAGATTTCCATCAAGGAGCACGTCGAAAAGTTTCATAGAGCTGAACTAACGGACACTAGCTGTGTGGTATGtggtaaaagttgtaaaaatcatgCTGCTCTTCTGAAACACTCATGGGAACATACGAGAGAACGATCGAGCTACAGCACTCACTGTTGCTCTAGGTGTGGTAAGACGTTCTACAATAAGGCACGCCTAAAACGGCACATGGTTTCCCATCGAAACAAATCGGTAAAGTGTGAAATATGTTTAGAAGAATTCCCGGATGGCAGAAGTTTGATGAATCATAGGCACTCACACACCAAGTCAAGACAGTTTCCCTGTAGTGAATGTGGGAAAACCTTTGGTTCGCGATCTTCGCAACAAATTCATTTGAGAATTCATTCCGGTGAACGTCCGTATGGTTGCAGATTTTGCTGGAAAGCGTTCGCTGATGGCGGTACGCTTCGTAAACACGAACGTGTTCATACTGGCGAAAAACCGTATGGTTGTTCTGTATGTCCACGAGCATTCAACCAACGAGTTGTTCTACGAGAGCACATTCGGTCTCATCACTCTGCGCCGGACGGCAAGCGAGGAACAAACGATCAGCCCTACTTTTGTTCCGTGTGTACACAACTATTCGAAAGATCTGCGGATTTGATACAGCATTTAATTCAACACAGCGATTTAAATACAGCTATGAAACGGCAACCGCCAACATTTCCGAGAAAGTACAAACGAAGGAAGAAGTTGAATTCAAATGAGACTGAAAAAGCTGTTCATAGTAAAGGCAAAAGAAGAAATGTCACACGTGTACCAGTCGAATCACgttcaacgaaaacaaaagaagacGAAGAGCTGTTGAAAAATCCCGCTGCAATATTACTAGAATATGGAGCAGGCAATTCAAGTAAGCAATTGATAGCTTCTCCAAAATATATCGACTCATACGAATTACTAGCGTCAACATCGCCGAATTGCGCTAAACCTTCCAATTTAGATGATAGTGGGATAAATCTGTTGAGTGACGTTGTACTGGTGAGCAATATGACTCAAGAATCAAGATACAAACCCATTAAACAGGAATCACCGAAACGTCGCACTACAACGGTAACCAACGCGTCCGGAATTCAAACAATCTCATCCTCATTTGTTTCGCGTCCACGAATGATTCATACTCAGAAGACTAGAGTATCTGTAATCGAAGGAAAGCGCAAAACTAAAACTATAATAACCAAAGACATCAAAAGTCAACCGGAAAGCGACGGATACTCGACGATGGATTTTAAACGGACCAAGGGTCGATCAGTGCCCACGTACAATGAAATACCATCGGACAAAATTTCCTCGGAGAGTTTTCCTCTGTTGGATGATGGCCGTGAGGACGACGGCGATGTTGAAGATATATCGGAGGAAAGACAGAAAACATTAGATGTCTTCTCTAATGGTGCCAATCAGAGGCAAAATGTGCATGGATATGAAGAACtcatcaatcaaaatctgttgatGGAAATCTCTCGCAAAGATAAGTACATCGATAAATACAACAGTGATATAGTAAATGATTTGGAGGAAATTCTTCGCTCACCGATTAAAAGTGCCACAAACATTGTTCAACTTATGGCAACTCCTAAATCAACTCAACATAATCCCAATGAGAGTACTGAATTCATCGCAGAAAATGGAGTGGAAGAAGATTGCAAATTTCCGCGCAGATTGCAACCCGTGCAGAAAAAAATTAGTAAGGAAGAAGCCCAACGTTCGCTGACAtcagcacttcgaagtcaacgtTTAACACGTCGACAATTGGAACGAGAAGTTAACTTTCTTCGAGAAGCATACGCATCTGATGATGCGACTGTATTCATCAAGCAGGAAAAAGATAGTCCCGACAAACTGTCCTCTATGCTGTTAGTGGATGATCGAACAACGACAGCCTCTTCTTCACCGCCATTGATTAATCCTAAACTTGAGCCACTGCAAAGTATGGCGACCGAAACCGTCGAATCTTCCGAACCCAACCGATTCGAATGTGAAATGTGTTCTGCCGTTTTTGATGATCGATCCCAGTTACTGCTGCATGTGCCGGTTCACATataa
Protein Sequence: MDQTTFTIWDPSQPNAKMRIINISGKGTTQLVESIPGIDKATGSASTGTEQIIFQTHNGQEFLVDENEISRIDQIPPENLIYMAADDGSLIQGEVVHVQEEEGIADQQIHNDIVVQQGEEYMECEVTEEVITDDWVQTDGQDCVQVTVDQLGATAVIGAVEDEVTVPLPTDQDEYTTSRPYPCDFCSRRFRKKANLMNHMVAHSNDRPHICNLCGARYMRRCDLLNHLKLHAYSTDEPEEPLRSDPEDDYRYEFNNTSSREQEMRSPSVEEDEELLVPAATQYRTPKLKPARKPRAKPTGSAGRSMKKSTPINHRSQQFENKFSVSVEPFVNLRPRFPVTDERKPFVCQHCGISFAREKALASHARIHGGDCQFECESCGDRFWDKTMLQNHVRQRHAANLVVAWTEQSGSTVYNTELPEAVELNADDESNERHYYCDSCGVIFQKQDQLKRHIKQAHGVKEQKCEIINQIVQQHYQQPLVEDDEESGDQCDEDESQQPLSCNVCGEKFAEALDLLAHAEVHTRSESHKCQLCIETFVDEISIKEHVEKFHRAELTDTSCVVCGKSCKNHAALLKHSWEHTRERSSYSTHCCSRCGKTFYNKARLKRHMVSHRNKSVKCEICLEEFPDGRSLMNHRHSHTKSRQFPCSECGKTFGSRSSQQIHLRIHSGERPYGCRFCWKAFADGGTLRKHERVHTGEKPYGCSVCPRAFNQRVVLREHIRSHHSAPDGKRGTNDQPYFCSVCTQLFERSADLIQHLIQHSDLNTAMKRQPPTFPRKYKRRKKLNSNETEKAVHSKGKRRNVTRVPVESRSTKTKEDEELLKNPAAILLEYGAGNSSKQLIASPKYIDSYELLASTSPNCAKPSNLDDSGINLLSDVVLVSNMTQESRYKPIKQESPKRRTTTVTNASGIQTISSSFVSRPRMIHTQKTRVSVIEGKRKTKTIITKDIKSQPESDGYSTMDFKRTKGRSVPTYNEIPSDKISSESFPLLDDGREDDGDVEDISEERQKTLDVFSNGANQRQNVHGYEELINQNLLMEISRKDKYIDKYNSDIVNDLEEILRSPIKSATNIVQLMATPKSTQHNPNESTEFIAENGVEEDCKFPRRLQPVQKKISKEEAQRSLTSALRSQRLTRRQLEREVNFLREAYASDDATVFIKQEKDSPDKLSSMLLVDDRTTTASSSPPLINPKLEPLQSMATETVESSEPNRFECEMCSAVFDDRSQLLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -